RNA–Protein interactions for RNA: ENST00000558347.5

TPM1-212, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,525 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-212ENST00000558347 TRGV9Q99603 122 aa7.94□□□□□ -1.14
TPM1-212ENST00000558347 IGKV1D-37A0A075B6S9 117 aa7.93□□□□□ -1.14
TPM1-212ENST00000558347 NPIPB5A8MRT5 1133 aa7.93□□□□□ -1.14
TPM1-212ENST00000558347 G3V318 75 aa7.93□□□□□ -1.14
TPM1-212ENST00000558347 PEX7O00628 323 aa7.93□□□□□ -1.14
TPM1-212ENST00000558347 ATP6V0E1O15342 81 aa7.93□□□□□ -1.14
TPM1-212ENST00000558347 ELANEP08246 267 aa7.93□□□□□ -1.14
TPM1-212ENST00000558347 EGR2P11161 476 aaPredicted RBP7.93□□□□□ -1.14
TPM1-212ENST00000558347 PSMB8P28062 276 aa7.93□□□□□ -1.14
TPM1-212ENST00000558347 PPIFP30405 207 aaKnown RBP7.93□□□□□ -1.14
TPM1-212ENST00000558347 HOXD3P31249 432 aaPredicted RBP7.93□□□□□ -1.14
TPM1-212ENST00000558347 MYCNOSP40205 109 aa7.93□□□□□ -1.14
TPM1-212ENST00000558347 NDPQ00604 133 aa7.93□□□□□ -1.14
TPM1-212ENST00000558347 MLANAQ16655 118 aa7.93□□□□□ -1.14
TPM1-212ENST00000558347 TMEM68Q96MH6 324 aa7.93□□□□□ -1.14
TPM1-212ENST00000558347 FNDC4Q9H6D8 234 aaPredicted RBP7.93□□□□□ -1.14
TPM1-212ENST00000558347 ZNF355PQ9NSJ1 428 aa7.93□□□□□ -1.14
TPM1-212ENST00000558347 ZNF580Q9UK33 172 aa7.93□□□□□ -1.14
TPM1-212ENST00000558347 TP53TG3Q9ULZ0 132 aa7.93□□□□□ -1.14
TPM1-212ENST00000558347 F11RQ9Y624 299 aaKnown RBP7.93□□□□□ -1.14
TPM1-212ENST00000558347 SERF1AO75920 110 aa7.93□□□□□ -1.14
TPM1-212ENST00000558347 REG1AP05451 166 aa7.93□□□□□ -1.14
TPM1-212ENST00000558347 LINC00310P59036 64 aa7.93□□□□□ -1.14
TPM1-212ENST00000558347 PLP1P60201 277 aa7.93□□□□□ -1.14
TPM1-212ENST00000558347 EGFEM1PQ0D2K5 195 aa7.93□□□□□ -1.14
TPM1-212ENST00000558347 ASPHD1Q5U4P2 390 aa7.93□□□□□ -1.14
TPM1-212ENST00000558347 PATE2Q6UY27 113 aa7.93□□□□□ -1.14
TPM1-212ENST00000558347 ZNF600Q6ZNG1 722 aa7.93□□□□□ -1.14
TPM1-212ENST00000558347 TEX43Q6ZNM6 134 aa7.93□□□□□ -1.14
TPM1-212ENST00000558347 BAGE3Q86Y29 109 aa7.93□□□□□ -1.14
TPM1-212ENST00000558347 BAGE2Q86Y30 109 aa7.93□□□□□ -1.14
TPM1-212ENST00000558347 TTC9CQ8N5M4 171 aa7.93□□□□□ -1.14
TPM1-212ENST00000558347 MYOZ3Q8TDC0 251 aa7.93□□□□□ -1.14
TPM1-212ENST00000558347 NPIPB3Q92617 1050 aa7.93□□□□□ -1.14
TPM1-212ENST00000558347 FXYD5Q96DB9 178 aa7.93□□□□□ -1.14
TPM1-212ENST00000558347 GRAMD2BQ96HH9 432 aa7.93□□□□□ -1.14
TPM1-212ENST00000558347 KLK15Q9H2R5 256 aa7.93□□□□□ -1.14
TPM1-212ENST00000558347 COL7A1Q02388 2944 aa7.92□□□□□ -1.14
TPM1-212ENST00000558347 GRIFINA4D1Z8 144 aa7.92□□□□□ -1.14
TPM1-212ENST00000558347 K7EIL1 84 aa7.92□□□□□ -1.14
TPM1-212ENST00000558347 CCL24O00175 119 aa7.92□□□□□ -1.14
TPM1-212ENST00000558347 NUPR1O60356 82 aa7.92□□□□□ -1.14
TPM1-212ENST00000558347 TMEM183BQ1AE95 376 aa7.92□□□□□ -1.14
TPM1-212ENST00000558347 KLK9Q2XQG4 91 aa7.92□□□□□ -1.14
TPM1-212ENST00000558347 TMEM116Q8NCL8 245 aa7.92□□□□□ -1.14
TPM1-212ENST00000558347 C20orf144Q9BQM9 153 aa7.92□□□□□ -1.14
TPM1-212ENST00000558347 FAM103A1Q9BTL3 118 aaKnown RBP7.92□□□□□ -1.14
TPM1-212ENST00000558347 RNASE7Q9H1E1 156 aaKnown RBP7.92□□□□□ -1.14
TPM1-212ENST00000558347 NAT8BQ9UHF3 227 aa7.92□□□□□ -1.14
TPM1-212ENST00000558347 KLK9Q9UKQ9 250 aa7.92□□□□□ -1.14
TPM1-212ENST00000558347 TRAV5A0A0B4J249 113 aa7.91□□□□□ -1.14
TPM1-212ENST00000558347 TRAV41A0A0B4J266 112 aa7.91□□□□□ -1.14
TPM1-212ENST00000558347 WI2-2373I1.2A0A1W2PRP0 233 aa7.91□□□□□ -1.14
TPM1-212ENST00000558347 IGLV1-40P01703 118 aa7.91□□□□□ -1.14
TPM1-212ENST00000558347 HIST1H1EP10412 219 aaKnown RBP7.91□□□□□ -1.14
TPM1-212ENST00000558347 MGST1P10620 155 aaKnown RBP7.91□□□□□ -1.14
TPM1-212ENST00000558347 MFAP2P55001 183 aa7.91□□□□□ -1.14
TPM1-212ENST00000558347 USF2Q15853 346 aaPredicted RBP7.91□□□□□ -1.14
TPM1-212ENST00000558347 ECSCRQ19T08 205 aa7.91□□□□□ -1.14
TPM1-212ENST00000558347 C19orf54Q5BKX5 351 aa7.91□□□□□ -1.14
TPM1-212ENST00000558347 MORN5Q5VZ52 161 aa7.91□□□□□ -1.14
TPM1-212ENST00000558347 Q6ZWC4 215 aa7.91□□□□□ -1.14
TPM1-212ENST00000558347 ATP5L2Q7Z4Y8 100 aa7.91□□□□□ -1.14
TPM1-212ENST00000558347 C4orf3Q8WVX3 66 aa7.91□□□□□ -1.14
TPM1-212ENST00000558347 GNB4Q9HAV0 340 aa7.91□□□□□ -1.14
TPM1-212ENST00000558347 ZNF331Q9NQX6 463 aaPredicted RBP7.91□□□□□ -1.14
TPM1-212ENST00000558347 ZNF586Q9NXT0 402 aa7.91□□□□□ -1.14
TPM1-212ENST00000558347 MRPL27Q9P0M9 148 aaKnown RBP7.91□□□□□ -1.14
TPM1-212ENST00000558347 KLF12Q9Y4X4 402 aa7.91□□□□□ -1.14
TPM1-212ENST00000558347 ZNF705FA8MVS1 300 aaPredicted RBP7.9□□□□□ -1.14
TPM1-212ENST00000558347 ZNF705DP0CH99 300 aaPredicted RBP7.9□□□□□ -1.14
TPM1-212ENST00000558347 ZNF705BP0CI00 300 aaPredicted RBP7.9□□□□□ -1.14
TPM1-212ENST00000558347 CT83Q5H943 113 aa7.9□□□□□ -1.14
TPM1-212ENST00000558347 LINC00305Q7Z4B0 112 aa7.9□□□□□ -1.14
TPM1-212ENST00000558347 ZNF491Q8N8L2 437 aa7.9□□□□□ -1.14
TPM1-212ENST00000558347 KCNS1Q96KK3 526 aa7.9□□□□□ -1.14
TPM1-212ENST00000558347 MCRIP2Q9BUT9 160 aaKnown RBP7.9□□□□□ -1.14
TPM1-212ENST00000558347 SAMD10Q9BYL1 202 aa7.9□□□□□ -1.14
TPM1-212ENST00000558347 EPDR1Q9UM22 224 aa7.9□□□□□ -1.14
TPM1-212ENST00000558347 IGLV11-55A0A075B6I3 123 aa7.89□□□□□ -1.15
TPM1-212ENST00000558347 HYPMO75409 117 aa7.89□□□□□ -1.15
TPM1-212ENST00000558347 BRI3O95415 125 aa7.89□□□□□ -1.15
TPM1-212ENST00000558347 APCSP02743 223 aa7.89□□□□□ -1.15
TPM1-212ENST00000558347 GPX1P07203 203 aa7.89□□□□□ -1.15
TPM1-212ENST00000558347 APELAP0DMC3 54 aa7.89□□□□□ -1.15
TPM1-212ENST00000558347 PYYP10082 97 aa7.89□□□□□ -1.15
TPM1-212ENST00000558347 RAB9AP51151 201 aa7.89□□□□□ -1.15
TPM1-212ENST00000558347 FHL3Q13643 280 aa7.89□□□□□ -1.15
TPM1-212ENST00000558347 UNQ5815/PRO19632Q6UWF5 114 aa7.89□□□□□ -1.15
TPM1-212ENST00000558347 OR11H1Q8NG94 326 aa7.89□□□□□ -1.15
TPM1-212ENST00000558347 DPF1Q92782 380 aa7.89□□□□□ -1.15
TPM1-212ENST00000558347 FMC1Q96HJ9 113 aa7.89□□□□□ -1.15
TPM1-212ENST00000558347 UBE2E2Q96LR5 201 aa7.89□□□□□ -1.15
TPM1-212ENST00000558347 FANCD2OSQ96PS1 177 aa7.89□□□□□ -1.15
TPM1-212ENST00000558347 ZNF492Q9P255 531 aa7.89□□□□□ -1.15
TPM1-212ENST00000558347 TRBV6-1A0A0K0K1D8 114 aa7.88□□□□□ -1.15
TPM1-212ENST00000558347 A0A1B0GV90 55 aa7.88□□□□□ -1.15
TPM1-212ENST00000558347 I3L2K1 104 aa7.88□□□□□ -1.15
TPM1-212ENST00000558347 M0R143 59 aa7.88□□□□□ -1.15
TPM1-212ENST00000558347 BMPR1BO00238 502 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms