RNA–Protein interactions for RNA: ENST00000558190.5

ATXN3-248, Transcript of ataxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATXN3, Length 26,812 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-248ENST00000558190 KNCNA6PVL3 124 aa2.96□□□□□ -1.94
ATXN3-248ENST00000558190 LINC01620Q4KN68 170 aa2.96□□□□□ -1.94
ATXN3-248ENST00000558190 TRAV13-2A0A0B4J235 113 aa2.96□□□□□ -1.94
ATXN3-248ENST00000558190 CRYGSP22914 178 aa2.96□□□□□ -1.94
ATXN3-248ENST00000558190 DYNLRB2Q8TF09 96 aa2.96□□□□□ -1.94
ATXN3-248ENST00000558190 TTTY12Q9BZ98 90 aa2.96□□□□□ -1.94
ATXN3-248ENST00000558190 ADGRB2O60241 1585 aa2.96□□□□□ -1.94
ATXN3-248ENST00000558190 CCL3L1P16619 93 aa2.95□□□□□ -1.94
ATXN3-248ENST00000558190 TEN1Q86WV5 123 aa2.95□□□□□ -1.94
ATXN3-248ENST00000558190 CCL21O00585 134 aa2.95□□□□□ -1.94
ATXN3-248ENST00000558190 PFN2P35080 140 aa2.95□□□□□ -1.94
ATXN3-248ENST00000558190 TRBV10-2A0A0K0K1G8 114 aa2.95□□□□□ -1.94
ATXN3-248ENST00000558190 HRCT1Q6UXD1 115 aa2.95□□□□□ -1.94
ATXN3-248ENST00000558190 USP54Q70EL1 1684 aa2.95□□□□□ -1.94
ATXN3-248ENST00000558190 EGR2P11161 476 aaPredicted RBP2.95□□□□□ -1.94
ATXN3-248ENST00000558190 C10orf55Q5SWW7 151 aa2.95□□□□□ -1.94
ATXN3-248ENST00000558190 TEX49A0A1B0GTD5 131 aa2.95□□□□□ -1.94
ATXN3-248ENST00000558190 C1orf210Q8IVY1 113 aa2.95□□□□□ -1.94
ATXN3-248ENST00000558190 RNF125Q96EQ8 232 aa2.95□□□□□ -1.94
ATXN3-248ENST00000558190 Q6ZUT4 128 aa2.95□□□□□ -1.94
ATXN3-248ENST00000558190 MPLKIPQ8TAP9 179 aa2.95□□□□□ -1.94
ATXN3-248ENST00000558190 INAFM2P0DMQ5 153 aa2.95□□□□□ -1.94
ATXN3-248ENST00000558190 FAM216BQ8N7L0 139 aa2.95□□□□□ -1.94
ATXN3-248ENST00000558190 MTORP42345 2549 aa2.95□□□□□ -1.94
ATXN3-248ENST00000558190 TLN2Q9Y4G6 2542 aa2.95□□□□□ -1.94
ATXN3-248ENST00000558190 IGHV1OR15-9A0A0B4J2B8 117 aa2.95□□□□□ -1.94
ATXN3-248ENST00000558190 FXYD5Q96DB9 178 aa2.95□□□□□ -1.94
ATXN3-248ENST00000558190 SMRP1Q8NCR6 262 aa2.95□□□□□ -1.94
ATXN3-248ENST00000558190 UBE2E2Q96LR5 201 aa2.95□□□□□ -1.94
ATXN3-248ENST00000558190 PIEZO1Q92508 2521 aa2.95□□□□□ -1.94
ATXN3-248ENST00000558190 HIGD1BQ9P298 99 aa2.95□□□□□ -1.94
ATXN3-248ENST00000558190 TRAV25A0A0B4J276 109 aa2.95□□□□□ -1.94
ATXN3-248ENST00000558190 SHISA9B4DS77 424 aa2.95□□□□□ -1.94
ATXN3-248ENST00000558190 TRBV12-3P01733 135 aa2.95□□□□□ -1.94
ATXN3-248ENST00000558190 CD28P10747 220 aa2.95□□□□□ -1.94
ATXN3-248ENST00000558190 SPTSSBQ8NFR3 76 aa2.95□□□□□ -1.94
ATXN3-248ENST00000558190 DSCR8Q96T75 97 aa2.95□□□□□ -1.94
ATXN3-248ENST00000558190 TULP4Q9NRJ4 1543 aa2.95□□□□□ -1.94
ATXN3-248ENST00000558190 PATE2Q6UY27 113 aa2.95□□□□□ -1.94
ATXN3-248ENST00000558190 COL1A1P02452 1464 aaPredicted RBP2.95□□□□□ -1.94
ATXN3-248ENST00000558190 IGLV3-32A0A0A0MS00 114 aa2.95□□□□□ -1.94
ATXN3-248ENST00000558190 IGHG3P01860 377 aa2.95□□□□□ -1.94
ATXN3-248ENST00000558190 NWD1Q149M9 1564 aa2.95□□□□□ -1.94
ATXN3-248ENST00000558190 PHF3Q92576 2039 aaKnown RBP2.95□□□□□ -1.94
ATXN3-248ENST00000558190 TRBV19A0A075B6N1 114 aa2.95□□□□□ -1.94
ATXN3-248ENST00000558190 TRGV2A0A075B6R0 118 aa2.95□□□□□ -1.94
ATXN3-248ENST00000558190 COX6A1P12074 109 aa2.95□□□□□ -1.94
ATXN3-248ENST00000558190 SLC50A1Q9BRV3 221 aa2.95□□□□□ -1.94
ATXN3-248ENST00000558190 TCL1BO95988 128 aa2.94□□□□□ -1.94
ATXN3-248ENST00000558190 INSL3P51460 131 aa2.94□□□□□ -1.94
ATXN3-248ENST00000558190 TMEM14CQ9P0S9 112 aa2.94□□□□□ -1.94
ATXN3-248ENST00000558190 EFNA4P52798 201 aa2.94□□□□□ -1.94
ATXN3-248ENST00000558190 SLIT1O75093 1534 aa2.94□□□□□ -1.94
ATXN3-248ENST00000558190 COLQQ9Y215 455 aaPredicted RBP2.94□□□□□ -1.94
ATXN3-248ENST00000558190 K7EM74 188 aa2.94□□□□□ -1.94
ATXN3-248ENST00000558190 TMEM167AQ8TBQ9 72 aa2.94□□□□□ -1.94
ATXN3-248ENST00000558190 IGHV3-16A0A0C4DH30 117 aa2.94□□□□□ -1.94
ATXN3-248ENST00000558190 PDE6HQ13956 83 aa2.94□□□□□ -1.94
ATXN3-248ENST00000558190 NDUFA11Q86Y39 141 aa2.94□□□□□ -1.94
ATXN3-248ENST00000558190 UBE2WQ96B02 151 aa2.94□□□□□ -1.94
ATXN3-248ENST00000558190 C2orf70A6NJV1 201 aa2.94□□□□□ -1.94
ATXN3-248ENST00000558190 IGHV3-53P01767 116 aa2.94□□□□□ -1.94
ATXN3-248ENST00000558190 CDK2AP2O75956 126 aa2.94□□□□□ -1.94
ATXN3-248ENST00000558190 SIGLEC9Q9Y336 463 aa2.94□□□□□ -1.94
ATXN3-248ENST00000558190 NDUFA7O95182 113 aa2.94□□□□□ -1.94
ATXN3-248ENST00000558190 PIK3CD-AS1Q5SR53 167 aa2.94□□□□□ -1.94
ATXN3-248ENST00000558190 OPRPNQ99935 248 aaPredicted RBP2.94□□□□□ -1.94
ATXN3-248ENST00000558190 PARP4Q9UKK3 1724 aaKnown RBP2.94□□□□□ -1.94
ATXN3-248ENST00000558190 IGKV1D-17A0A075B6S4 117 aa2.94□□□□□ -1.94
ATXN3-248ENST00000558190 CECR9P0C854 216 aa2.94□□□□□ -1.94
ATXN3-248ENST00000558190 SAA2P0DJI9 122 aaPredicted RBP2.94□□□□□ -1.94
ATXN3-248ENST00000558190 TMEM131LA2VDJ0 1609 aa2.94□□□□□ -1.94
ATXN3-248ENST00000558190 KIR2DL5BA0A0G2JN68 375 aa2.94□□□□□ -1.94
ATXN3-248ENST00000558190 KIR2DL5BA0A0G2JPC4 375 aa2.94□□□□□ -1.94
ATXN3-248ENST00000558190 I3L3M4 83 aa2.94□□□□□ -1.94
ATXN3-248ENST00000558190 GATA3P23771 443 aa2.94□□□□□ -1.94
ATXN3-248ENST00000558190 NSUN5P1Q3KNT7 163 aa2.94□□□□□ -1.94
ATXN3-248ENST00000558190 KIR2DL5AQ8N109 375 aa2.94□□□□□ -1.94
ATXN3-248ENST00000558190 LGALS9O00182 355 aa2.94□□□□□ -1.94
ATXN3-248ENST00000558190 RIMBP3CA6NJZ7 1639 aa2.94□□□□□ -1.94
ATXN3-248ENST00000558190 RIMBP3BA6NNM3 1639 aa2.94□□□□□ -1.94
ATXN3-248ENST00000558190 RIMBP3Q9UFD9 1639 aa2.94□□□□□ -1.94
ATXN3-248ENST00000558190 AJUBAQ96IF1 538 aa2.94□□□□□ -1.94
ATXN3-248ENST00000558190 DTX1Q86Y01 620 aa2.94□□□□□ -1.94
ATXN3-248ENST00000558190 PINLYPA6NC86 204 aa2.94□□□□□ -1.94
ATXN3-248ENST00000558190 RHODO00212 210 aa2.94□□□□□ -1.94
ATXN3-248ENST00000558190 IGHG2P01859 326 aa2.94□□□□□ -1.94
ATXN3-248ENST00000558190 TMEM190Q8WZ59 177 aa2.94□□□□□ -1.94
ATXN3-248ENST00000558190 Q8TAT8 98 aa2.94□□□□□ -1.94
ATXN3-248ENST00000558190 UBL5Q9BZL1 73 aa2.93□□□□□ -1.94
ATXN3-248ENST00000558190 LRCOL1A6NCL2 159 aa2.93□□□□□ -1.94
ATXN3-248ENST00000558190 COX7B2Q8TF08 81 aa2.93□□□□□ -1.94
ATXN3-248ENST00000558190 SLIT2O94813 1529 aa2.93□□□□□ -1.94
ATXN3-248ENST00000558190 TRGV4A0A0C4DH28 118 aa2.93□□□□□ -1.94
ATXN3-248ENST00000558190 B9A039 149 aa2.93□□□□□ -1.94
ATXN3-248ENST00000558190 NDUFC2-KCTD14E9PQ53 114 aa2.93□□□□□ -1.94
ATXN3-248ENST00000558190 PAX8Q06710 450 aa2.93□□□□□ -1.94
ATXN3-248ENST00000558190 C15orf61A6NNL5 157 aa2.93□□□□□ -1.94
ATXN3-248ENST00000558190 C1orf147Q96MC9 270 aaPredicted RBP2.93□□□□□ -1.94
ATXN3-248ENST00000558190 IGKV1-16P04430 117 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms