RNA–Protein interactions for RNA: ENST00000557275.5

SYNE3-205, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SYNE3, Length 13,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-205ENST00000557275 ZNF831Q5JPB2 1677 aa7.27□□□□□ -1.25
SYNE3-205ENST00000557275 hDV102S1A0JD36 115 aa7.27□□□□□ -1.25
SYNE3-205ENST00000557275 PRSS46E5RG02 174 aa7.27□□□□□ -1.25
SYNE3-205ENST00000557275 LHBP01229 141 aa7.27□□□□□ -1.25
SYNE3-205ENST00000557275 THBDP07204 575 aa7.27□□□□□ -1.25
SYNE3-205ENST00000557275 CTSBP07858 339 aa7.27□□□□□ -1.25
SYNE3-205ENST00000557275 HLA-DRB4P13762 266 aa7.27□□□□□ -1.25
SYNE3-205ENST00000557275 HLA-DRB4X5D2U9 266 aa7.27□□□□□ -1.25
SYNE3-205ENST00000557275 LYRM9A8MSI8 78 aa7.27□□□□□ -1.25
SYNE3-205ENST00000557275 RFLNBQ8N5W9 214 aa7.27□□□□□ -1.25
SYNE3-205ENST00000557275 CXCL5P42830 114 aa7.27□□□□□ -1.25
SYNE3-205ENST00000557275 CTHRC1Q96CG8 243 aa7.27□□□□□ -1.25
SYNE3-205ENST00000557275 RAMP3O60896 148 aa7.27□□□□□ -1.25
SYNE3-205ENST00000557275 IGKV1D-16P01601 117 aa7.27□□□□□ -1.25
SYNE3-205ENST00000557275 APOC4P55056 127 aa7.27□□□□□ -1.25
SYNE3-205ENST00000557275 M0R1W7 72 aa7.26□□□□□ -1.25
SYNE3-205ENST00000557275 HS3ST6Q96QI5 342 aa7.26□□□□□ -1.25
SYNE3-205ENST00000557275 CHCHD2P9Q5T1J5 151 aaPredicted RBP7.26□□□□□ -1.25
SYNE3-205ENST00000557275 Q8N8P6 123 aa7.26□□□□□ -1.25
SYNE3-205ENST00000557275 RNF152Q8N8N0 203 aa7.26□□□□□ -1.25
SYNE3-205ENST00000557275 PFN1P07737 140 aaKnown RBP7.26□□□□□ -1.25
SYNE3-205ENST00000557275 GATA3P23771 443 aa7.26□□□□□ -1.25
SYNE3-205ENST00000557275 RNF126Q9BV68 326 aa7.26□□□□□ -1.25
SYNE3-205ENST00000557275 ZNF492Q9P255 531 aa7.26□□□□□ -1.25
SYNE3-205ENST00000557275 SH2D1AO60880 128 aa7.26□□□□□ -1.25
SYNE3-205ENST00000557275 C20orf78Q9BR46 151 aa7.26□□□□□ -1.25
SYNE3-205ENST00000557275 GAS1P54826 345 aa7.26□□□□□ -1.25
SYNE3-205ENST00000557275 BMPERQ8N8U9 685 aa7.26□□□□□ -1.25
SYNE3-205ENST00000557275 NPYP01303 97 aa7.26□□□□□ -1.25
SYNE3-205ENST00000557275 LCN12Q6JVE5 192 aa7.26□□□□□ -1.25
SYNE3-205ENST00000557275 C20orf204Q6ZNR8 217 aa7.26□□□□□ -1.25
SYNE3-205ENST00000557275 PPP1R32Q7Z5V6 425 aa7.26□□□□□ -1.25
SYNE3-205ENST00000557275 LILRA6Q6PI73 481 aa7.26□□□□□ -1.25
SYNE3-205ENST00000557275 SAP30O75446 220 aa7.25□□□□□ -1.25
SYNE3-205ENST00000557275 UBE2AP49459 152 aa7.25□□□□□ -1.25
SYNE3-205ENST00000557275 LINC01590Q5TEZ4 76 aa7.25□□□□□ -1.25
SYNE3-205ENST00000557275 TP53TG1Q9Y2A0 90 aa7.25□□□□□ -1.25
SYNE3-205ENST00000557275 PCOLCEQ15113 449 aa7.25□□□□□ -1.25
SYNE3-205ENST00000557275 CFHR4Q92496 578 aa7.25□□□□□ -1.25
SYNE3-205ENST00000557275 NDUFA12Q9UI09 145 aa7.25□□□□□ -1.25
SYNE3-205ENST00000557275 NDUFC1O43677 76 aa7.25□□□□□ -1.25
SYNE3-205ENST00000557275 CECR9P0C854 216 aa7.25□□□□□ -1.25
SYNE3-205ENST00000557275 A0A1W2PR77 199 aa7.25□□□□□ -1.25
SYNE3-205ENST00000557275 CCL4P13236 92 aa7.25□□□□□ -1.25
SYNE3-205ENST00000557275 PSMB8P28062 276 aa7.25□□□□□ -1.25
SYNE3-205ENST00000557275 IGLC2P0DOY2 106 aa7.25□□□□□ -1.25
SYNE3-205ENST00000557275 IGLC3P0DOY3 106 aa7.25□□□□□ -1.25
SYNE3-205ENST00000557275 ZFP2Q6ZN57 461 aa7.25□□□□□ -1.25
SYNE3-205ENST00000557275 COL18A1P39060 1754 aa7.25□□□□□ -1.25
SYNE3-205ENST00000557275 E9PQ18 207 aa7.25□□□□□ -1.25
SYNE3-205ENST00000557275 TMEM92Q6UXU6 159 aa7.25□□□□□ -1.25
SYNE3-205ENST00000557275 C14orf178Q8N769 122 aaPredicted RBP7.25□□□□□ -1.25
SYNE3-205ENST00000557275 C15orf53Q8NAA6 179 aa7.25□□□□□ -1.25
SYNE3-205ENST00000557275 EXPH5Q8NEV8 1989 aa7.25□□□□□ -1.25
SYNE3-205ENST00000557275 PYYP10082 97 aa7.25□□□□□ -1.25
SYNE3-205ENST00000557275 LINC01565O15544 149 aa7.25□□□□□ -1.25
SYNE3-205ENST00000557275 GPHA2Q96T91 129 aa7.25□□□□□ -1.25
SYNE3-205ENST00000557275 RHOHQ15669 191 aa7.25□□□□□ -1.25
SYNE3-205ENST00000557275 COX6A1P12074 109 aa7.25□□□□□ -1.25
SYNE3-205ENST00000557275 ZNF319Q9P2F9 582 aa7.25□□□□□ -1.25
SYNE3-205ENST00000557275 IGHV3-23P01764 117 aa7.24□□□□□ -1.25
SYNE3-205ENST00000557275 C14orf132Q9NPU4 83 aa7.24□□□□□ -1.25
SYNE3-205ENST00000557275 ZSWIM8A7E2V4 1837 aa7.24□□□□□ -1.25
SYNE3-205ENST00000557275 C19orf48Q6RUI8 117 aa7.24□□□□□ -1.25
SYNE3-205ENST00000557275 CDKN1AP38936 164 aa7.24□□□□□ -1.25
SYNE3-205ENST00000557275 MORN5Q5VZ52 161 aa7.24□□□□□ -1.25
SYNE3-205ENST00000557275 RNASE6Q93091 150 aaKnown RBP7.24□□□□□ -1.25
SYNE3-205ENST00000557275 NRTNQ99748 197 aa7.24□□□□□ -1.25
SYNE3-205ENST00000557275 TRAV40A0A0B4J280 105 aa7.24□□□□□ -1.25
SYNE3-205ENST00000557275 NTN3O00634 580 aaPredicted RBP7.24□□□□□ -1.25
SYNE3-205ENST00000557275 PIN1P1O15428 100 aa7.24□□□□□ -1.25
SYNE3-205ENST00000557275 FAM240AA0A1B0GVK7 77 aa7.24□□□□□ -1.25
SYNE3-205ENST00000557275 PLAC1Q9HBJ0 212 aa7.24□□□□□ -1.25
SYNE3-205ENST00000557275 IGLV3-21P80748 117 aaPredicted RBP7.24□□□□□ -1.25
SYNE3-205ENST00000557275 Q5BKY6 102 aa7.24□□□□□ -1.25
SYNE3-205ENST00000557275 VSIG2Q96IQ7 327 aa7.24□□□□□ -1.25
SYNE3-205ENST00000557275 SIGLEC12Q96PQ1 595 aa7.24□□□□□ -1.25
SYNE3-205ENST00000557275 C2orf66Q6UXQ4 117 aa7.23□□□□□ -1.25
SYNE3-205ENST00000557275 ZNF664Q8N3J9 261 aa7.23□□□□□ -1.25
SYNE3-205ENST00000557275 PRR19A6NJB7 356 aa7.23□□□□□ -1.25
SYNE3-205ENST00000557275 PYGO2Q9BRQ0 406 aa7.23□□□□□ -1.25
SYNE3-205ENST00000557275 A0A0B4J2C4 111 aa7.23□□□□□ -1.25
SYNE3-205ENST00000557275 B5MCH6 92 aa7.23□□□□□ -1.25
SYNE3-205ENST00000557275 NUP210Q8TEM1 1887 aaPredicted RBP7.23□□□□□ -1.25
SYNE3-205ENST00000557275 TEN1Q86WV5 123 aa7.23□□□□□ -1.25
SYNE3-205ENST00000557275 TNRC6BQ9UPQ9 1833 aaKnown RBP7.23□□□□□ -1.25
SYNE3-205ENST00000557275 TRAV12-1A0A0B4J245 112 aa7.23□□□□□ -1.25
SYNE3-205ENST00000557275 CELA3AP09093 270 aa7.23□□□□□ -1.25
SYNE3-205ENST00000557275 CXCL1P09341 107 aa7.23□□□□□ -1.25
SYNE3-205ENST00000557275 RNASE2P10153 161 aaKnown RBP7.23□□□□□ -1.25
SYNE3-205ENST00000557275 ZNF474Q6S9Z5 364 aaPredicted RBP7.23□□□□□ -1.25
SYNE3-205ENST00000557275 SCRT1Q9BWW7 348 aa7.23□□□□□ -1.25
SYNE3-205ENST00000557275 IGKV2-40A0A087WW87 121 aaPredicted RBP7.23□□□□□ -1.25
SYNE3-205ENST00000557275 IGKV2D-40P01614 121 aaPredicted RBP7.23□□□□□ -1.25
SYNE3-205ENST00000557275 Q86TA4 180 aa7.23□□□□□ -1.25
SYNE3-205ENST00000557275 ATP6V0E2Q8NHE4 81 aa7.23□□□□□ -1.25
SYNE3-205ENST00000557275 UBE2E2Q96LR5 201 aa7.23□□□□□ -1.25
SYNE3-205ENST00000557275 BRWD3Q6RI45 1802 aa7.23□□□□□ -1.25
SYNE3-205ENST00000557275 C5orf67F2Z3F1 127 aa7.23□□□□□ -1.25
SYNE3-205ENST00000557275 VWC2Q2TAL6 325 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms