RNA–Protein interactions for RNA: ENST00000556413.1

SCFD1-219, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 512 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-219ENST00000556413 TALDO1P37837 337 aa1.57□□□□□ -2.16
SCFD1-219ENST00000556413 LPAR6P43657 344 aa1.57□□□□□ -2.16
SCFD1-219ENST00000556413 HSPA13P48723 471 aa1.57□□□□□ -2.16
SCFD1-219ENST00000556413 AQP4P55087 323 aa1.57□□□□□ -2.16
SCFD1-219ENST00000556413 TAS2R43P59537 309 aa1.57□□□□□ -2.16
SCFD1-219ENST00000556413 GNG2P59768 71 aa1.57□□□□□ -2.16
SCFD1-219ENST00000556413 ARPC4P59998 168 aa1.57□□□□□ -2.16
SCFD1-219ENST00000556413 DHRS2Q13268 280 aa1.57□□□□□ -2.16
SCFD1-219ENST00000556413 OXA1LQ15070 435 aa1.57□□□□□ -2.16
SCFD1-219ENST00000556413 CDNFQ49AH0 187 aa1.57□□□□□ -2.16
SCFD1-219ENST00000556413 C1orf134Q5TEV5 83 aa1.57□□□□□ -2.16
SCFD1-219ENST00000556413 FAM222AQ5U5X8 452 aa1.57□□□□□ -2.16
SCFD1-219ENST00000556413 HACD4Q5VWC8 232 aa1.57□□□□□ -2.16
SCFD1-219ENST00000556413 LAMTOR1Q6IAA8 161 aa1.57□□□□□ -2.16
SCFD1-219ENST00000556413 TOMM20LQ6UXN7 152 aa1.57□□□□□ -2.16
SCFD1-219ENST00000556413 LINC00336Q6ZUF6 198 aa1.57□□□□□ -2.16
SCFD1-219ENST00000556413 C8orf59Q8N0T1 100 aaPredicted RBP1.57□□□□□ -2.16
SCFD1-219ENST00000556413 GDPD1Q8N9F7 314 aa1.57□□□□□ -2.16
SCFD1-219ENST00000556413 ZNF436-AS1Q8NC38 126 aaPredicted RBP1.57□□□□□ -2.16
SCFD1-219ENST00000556413 OR10G9Q8NGN4 311 aa1.57□□□□□ -2.16
SCFD1-219ENST00000556413 FRZBQ92765 325 aa1.57□□□□□ -2.16
SCFD1-219ENST00000556413 MRGPRFQ96AM1 343 aa1.57□□□□□ -2.16
SCFD1-219ENST00000556413 LINC00052Q96N35 136 aa1.57□□□□□ -2.16
SCFD1-219ENST00000556413 RNF5Q99942 180 aa1.57□□□□□ -2.16
SCFD1-219ENST00000556413 TPPP3Q9BW30 176 aa1.57□□□□□ -2.16
SCFD1-219ENST00000556413 MND1Q9BWT6 205 aa1.57□□□□□ -2.16
SCFD1-219ENST00000556413 COMMD5Q9GZQ3 224 aa1.57□□□□□ -2.16
SCFD1-219ENST00000556413 C6orf62Q9GZU0 229 aaPredicted RBP1.57□□□□□ -2.16
SCFD1-219ENST00000556413 MFFQ9GZY8 342 aa1.57□□□□□ -2.16
SCFD1-219ENST00000556413 SLC35B3Q9H1N7 401 aa1.57□□□□□ -2.16
SCFD1-219ENST00000556413 FKBP14Q9NWM8 211 aa1.57□□□□□ -2.16
SCFD1-219ENST00000556413 MRPL27Q9P0M9 148 aaKnown RBP1.57□□□□□ -2.16
SCFD1-219ENST00000556413 SMPXQ9UHP9 88 aa1.57□□□□□ -2.16
SCFD1-219ENST00000556413 TBC1D24Q9ULP9 559 aa1.57□□□□□ -2.16
SCFD1-219ENST00000556413 PUS1Q9Y606 427 aaKnown RBP eCLIP1.57□□□□□ -2.16
SCFD1-219ENST00000556413 F11RQ9Y624 299 aaKnown RBP1.57□□□□□ -2.16
SCFD1-219ENST00000556413 PKHD1L1Q86WI1 4243 aa1.56□□□□□ -2.16
SCFD1-219ENST00000556413 LRP2P98164 4655 aa1.56□□□□□ -2.16
SCFD1-219ENST00000556413 TRAV12-2A0A075B6T6 113 aa1.56□□□□□ -2.16
SCFD1-219ENST00000556413 A0A096LPF7 62 aa1.56□□□□□ -2.16
SCFD1-219ENST00000556413 TRBV7-1A0A0A6YYK4 115 aa1.56□□□□□ -2.16
SCFD1-219ENST00000556413 TRAV25A0A0B4J276 109 aa1.56□□□□□ -2.16
SCFD1-219ENST00000556413 A0A0J9YY99 117 aa1.56□□□□□ -2.16
SCFD1-219ENST00000556413 LOC100506127A0A0U1RQW1 187 aa1.56□□□□□ -2.16
SCFD1-219ENST00000556413 IRGMA1A4Y4 181 aa1.56□□□□□ -2.16
SCFD1-219ENST00000556413 IFITM5A6NNB3 132 aa1.56□□□□□ -2.16
SCFD1-219ENST00000556413 ZNF705GA8MUZ8 300 aaPredicted RBP1.56□□□□□ -2.16
SCFD1-219ENST00000556413 I3L2K1 104 aa1.56□□□□□ -2.16
SCFD1-219ENST00000556413 NDUFA4O00483 81 aa1.56□□□□□ -2.16
SCFD1-219ENST00000556413 ATP8B1O43520 1251 aa1.56□□□□□ -2.16
SCFD1-219ENST00000556413 GNG7O60262 68 aa1.56□□□□□ -2.16
SCFD1-219ENST00000556413 CREBL2O60519 120 aaPredicted RBP1.56□□□□□ -2.16
SCFD1-219ENST00000556413 PPYP01298 95 aa1.56□□□□□ -2.16
SCFD1-219ENST00000556413 IGKV1-39P01597 117 aa1.56□□□□□ -2.16
SCFD1-219ENST00000556413 IGKV1D-39P04432 117 aa1.56□□□□□ -2.16
SCFD1-219ENST00000556413 EIF4EP06730 217 aaKnown RBP1.56□□□□□ -2.16
SCFD1-219ENST00000556413 TRAPPC2P0DI81 140 aa1.56□□□□□ -2.16
SCFD1-219ENST00000556413 TRAPPC2BP0DI82 140 aa1.56□□□□□ -2.16
SCFD1-219ENST00000556413 INAFM2P0DMQ5 153 aa1.56□□□□□ -2.16
SCFD1-219ENST00000556413 P0DMU3 169 aa1.56□□□□□ -2.16
SCFD1-219ENST00000556413 FAM231AP0DMU4 169 aa1.56□□□□□ -2.16
SCFD1-219ENST00000556413 FAM231CP0DMU5 169 aa1.56□□□□□ -2.16
SCFD1-219ENST00000556413 DEFB130BP0DP73 79 aa1.56□□□□□ -2.16
SCFD1-219ENST00000556413 DEFB130AP0DP74 79 aa1.56□□□□□ -2.16
SCFD1-219ENST00000556413 HIST1H1BP16401 226 aaKnown RBP1.56□□□□□ -2.16
SCFD1-219ENST00000556413 RAB3BP20337 219 aa1.56□□□□□ -2.16
SCFD1-219ENST00000556413 GADD45AP24522 165 aa1.56□□□□□ -2.16
SCFD1-219ENST00000556413 PSMB9P28065 219 aa1.56□□□□□ -2.16
SCFD1-219ENST00000556413 HLA-DMAP28067 261 aa1.56□□□□□ -2.16
SCFD1-219ENST00000556413 SERPINB10P48595 397 aa1.56□□□□□ -2.16
SCFD1-219ENST00000556413 FGF8P55075 233 aaPredicted RBP1.56□□□□□ -2.16
SCFD1-219ENST00000556413 OR2F1Q13607 317 aa1.56□□□□□ -2.16
SCFD1-219ENST00000556413 SP6Q3SY56 376 aa1.56□□□□□ -2.16
SCFD1-219ENST00000556413 IDNKQ5T6J7 187 aa1.56□□□□□ -2.16
SCFD1-219ENST00000556413 Q5VSD8 79 aa1.56□□□□□ -2.16
SCFD1-219ENST00000556413 TTC23Q5W5X9 447 aa1.56□□□□□ -2.16
SCFD1-219ENST00000556413 ZFP1Q6P2D0 407 aa1.56□□□□□ -2.16
SCFD1-219ENST00000556413 BAP18Q8IXM2 172 aa1.56□□□□□ -2.16
SCFD1-219ENST00000556413 OR4B1Q8NGF8 309 aa1.56□□□□□ -2.16
SCFD1-219ENST00000556413 OR4D5Q8NGN0 318 aa1.56□□□□□ -2.16
SCFD1-219ENST00000556413 OR1L8Q8NGR8 309 aa1.56□□□□□ -2.16
SCFD1-219ENST00000556413 LSM10Q969L4 123 aaKnown RBP1.56□□□□□ -2.16
SCFD1-219ENST00000556413 ADTRPQ96IZ2 230 aa1.56□□□□□ -2.16
SCFD1-219ENST00000556413 CNBD2Q96M20 576 aa1.56□□□□□ -2.16
SCFD1-219ENST00000556413 PBDC1Q9BVG4 233 aa1.56□□□□□ -2.16
SCFD1-219ENST00000556413 PARD6GQ9BYG4 376 aaPredicted RBP1.56□□□□□ -2.16
SCFD1-219ENST00000556413 NDUFA4L2Q9NRX3 87 aa1.56□□□□□ -2.16
SCFD1-219ENST00000556413 TMEM14BQ9NUH8 114 aa1.56□□□□□ -2.16
SCFD1-219ENST00000556413 BET1LQ9NYM9 111 aa1.56□□□□□ -2.16
SCFD1-219ENST00000556413 ANXA10Q9UJ72 324 aa1.56□□□□□ -2.16
SCFD1-219ENST00000556413 RAB22AQ9UL26 194 aa1.56□□□□□ -2.16
SCFD1-219ENST00000556413 RRP15Q9Y3B9 282 aaKnown RBP1.56□□□□□ -2.16
SCFD1-219ENST00000556413 LRRC42Q9Y546 428 aa1.56□□□□□ -2.16
SCFD1-219ENST00000556413 TRAV14DV4A0A0A6YYC5 116 aa1.55□□□□□ -2.16
SCFD1-219ENST00000556413 NBDYA0A0U1RRE5 68 aa1.55□□□□□ -2.16
SCFD1-219ENST00000556413 F5H768 121 aa1.55□□□□□ -2.16
SCFD1-219ENST00000556413 M0R2Z0 102 aa1.55□□□□□ -2.16
SCFD1-219ENST00000556413 PEX7O00628 323 aa1.55□□□□□ -2.16
SCFD1-219ENST00000556413 MRPS14O60783 128 aaKnown RBP1.55□□□□□ -2.16
SCFD1-219ENST00000556413 PGLYRP1O75594 196 aaPredicted RBP1.55□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 99.9 ms