RNA–Protein interactions for RNA: ENST00000556071.5

LINC00871-202, long intergenic non-protein coding RNA 871, humanhuman

TSL 3 BASIC

Gene LINC00871, Length 554 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00871-202ENST00000556071 PRR15Q8IV56 129 aa-0.11□□□□□ -2.43
LINC00871-202ENST00000556071 PAIP2Q9BPZ3 127 aaKnown RBP-0.11□□□□□ -2.43
LINC00871-202ENST00000556071 NSD1Q96L73 2696 aaPredicted RBP-0.12□□□□□ -2.43
LINC00871-202ENST00000556071 PDE6GP18545 87 aa-0.12□□□□□ -2.43
LINC00871-202ENST00000556071 FADDQ13158 208 aa-0.12□□□□□ -2.43
LINC00871-202ENST00000556071 SCGB2B2Q4G0G5 96 aa-0.12□□□□□ -2.43
LINC00871-202ENST00000556071 NCOR2Q9Y618 2525 aa-0.12□□□□□ -2.43
LINC00871-202ENST00000556071 ANKRD17O75179 2603 aaKnown RBP-0.12□□□□□ -2.43
LINC00871-202ENST00000556071 A0A0J9YY99 117 aa-0.13□□□□□ -2.43
LINC00871-202ENST00000556071 LYRM1O43325 122 aa-0.13□□□□□ -2.43
LINC00871-202ENST00000556071 HIST1H2BKO60814 126 aa-0.13□□□□□ -2.43
LINC00871-202ENST00000556071 IFNA14P01570 189 aa-0.13□□□□□ -2.43
LINC00871-202ENST00000556071 HIST1H2BJP06899 126 aa-0.13□□□□□ -2.43
LINC00871-202ENST00000556071 MYH2Q9UKX2 1941 aa-0.13□□□□□ -2.43
LINC00871-202ENST00000556071 TRAV5A0A0B4J249 113 aa-0.14□□□□□ -2.43
LINC00871-202ENST00000556071 H7C1C5 153 aa-0.14□□□□□ -2.43
LINC00871-202ENST00000556071 OGNP20774 298 aaKnown RBP-0.14□□□□□ -2.43
LINC00871-202ENST00000556071 LCN6P62502 163 aa-0.14□□□□□ -2.43
LINC00871-202ENST00000556071 PXT1Q8NFP0 134 aa-0.14□□□□□ -2.43
LINC00871-202ENST00000556071 CACNA1HO95180 2353 aa-0.14□□□□□ -2.43
LINC00871-202ENST00000556071 FRMPD1Q5SYB0 1578 aa-0.15□□□□□ -2.43
LINC00871-202ENST00000556071 BCORL1Q5H9F3 1711 aa-0.15□□□□□ -2.43
LINC00871-202ENST00000556071 RIIAD1A6NNX1 92 aa-0.15□□□□□ -2.43
LINC00871-202ENST00000556071 GPR31O00270 319 aa-0.15□□□□□ -2.43
LINC00871-202ENST00000556071 DIAPH2-AS1Q14236 149 aa-0.15□□□□□ -2.43
LINC00871-202ENST00000556071 SNCBQ16143 134 aa-0.15□□□□□ -2.43
LINC00871-202ENST00000556071 CST11Q9H112 138 aa-0.15□□□□□ -2.43
LINC00871-202ENST00000556071 CELSR1Q9NYQ6 3014 aa-0.15□□□□□ -2.43
LINC00871-202ENST00000556071 NINQ8N4C6 2090 aa-0.15□□□□□ -2.43
LINC00871-202ENST00000556071 HRNRQ86YZ3 2850 aaPredicted RBP-0.16□□□□□ -2.43
LINC00871-202ENST00000556071 PIEZO1Q92508 2521 aa-0.16□□□□□ -2.43
LINC00871-202ENST00000556071 CAMSAP1Q5T5Y3 1602 aa-0.16□□□□□ -2.43
LINC00871-202ENST00000556071 NISCHQ9Y2I1 1504 aa-0.16□□□□□ -2.43
LINC00871-202ENST00000556071 HSD11B1P28845 292 aa-0.16□□□□□ -2.44
LINC00871-202ENST00000556071 CASC2Q6XLA1 102 aa-0.16□□□□□ -2.44
LINC00871-202ENST00000556071 ZCCHC23Q6ZST2 131 aa-0.16□□□□□ -2.44
LINC00871-202ENST00000556071 FAM216BQ8N7L0 139 aa-0.16□□□□□ -2.44
LINC00871-202ENST00000556071 UHRF1BP1Q6BDS2 1440 aa-0.16□□□□□ -2.44
LINC00871-202ENST00000556071 OTOGQ6ZRI0 2925 aa-0.17□□□□□ -2.44
LINC00871-202ENST00000556071 LY6G6CO95867 125 aa-0.17□□□□□ -2.44
LINC00871-202ENST00000556071 PHBP35232 272 aa-0.17□□□□□ -2.44
LINC00871-202ENST00000556071 VMA21Q3ZAQ7 101 aa-0.17□□□□□ -2.44
LINC00871-202ENST00000556071 AKR1C8PQ5T2L2 129 aa-0.17□□□□□ -2.44
LINC00871-202ENST00000556071 C10orf111Q8N326 155 aa-0.17□□□□□ -2.44
LINC00871-202ENST00000556071 SSR3Q9UNL2 185 aa-0.17□□□□□ -2.44
LINC00871-202ENST00000556071 NCAPD3P42695 1498 aa-0.17□□□□□ -2.44
LINC00871-202ENST00000556071 CACNA1CQ13936 2221 aa-0.18□□□□□ -2.44
LINC00871-202ENST00000556071 CAPZBP47756 277 aa-0.18□□□□□ -2.44
LINC00871-202ENST00000556071 HBBP68871 147 aa-0.18□□□□□ -2.44
LINC00871-202ENST00000556071 C1orf140Q5VVS0 124 aa-0.18□□□□□ -2.44
LINC00871-202ENST00000556071 LINC00269Q8N2A0 174 aa-0.18□□□□□ -2.44
LINC00871-202ENST00000556071 LRP1Q07954 4544 aaKnown RBP-0.18□□□□□ -2.44
LINC00871-202ENST00000556071 UBR5O95071 2799 aaPredicted RBP-0.18□□□□□ -2.44
LINC00871-202ENST00000556071 ATG12O94817 140 aa-0.19□□□□□ -2.44
LINC00871-202ENST00000556071 APOA2P02652 100 aa-0.19□□□□□ -2.44
LINC00871-202ENST00000556071 CAV3P56539 151 aa-0.19□□□□□ -2.44
LINC00871-202ENST00000556071 PHF5AQ7RTV0 110 aaKnown RBP-0.19□□□□□ -2.44
LINC00871-202ENST00000556071 SH3BGRL3Q9H299 93 aa-0.19□□□□□ -2.44
LINC00871-202ENST00000556071 LYRM2Q9NU23 88 aaPredicted RBP-0.19□□□□□ -2.44
LINC00871-202ENST00000556071 DSTQ03001 7570 aaKnown RBP-0.19□□□□□ -2.44
LINC00871-202ENST00000556071 ABCA4P78363 2273 aa-0.19□□□□□ -2.44
LINC00871-202ENST00000556071 ABCA12Q86UK0 2595 aa-0.19□□□□□ -2.44
LINC00871-202ENST00000556071 CD109Q6YHK3 1445 aa-0.2□□□□□ -2.44
LINC00871-202ENST00000556071 TMEM210A6NLX4 147 aa-0.2□□□□□ -2.44
LINC00871-202ENST00000556071 A6NN06 94 aa-0.2□□□□□ -2.44
LINC00871-202ENST00000556071 MRPS25P82663 173 aaKnown RBP-0.2□□□□□ -2.44
LINC00871-202ENST00000556071 KRTAP6-1Q3LI64 71 aa-0.2□□□□□ -2.44
LINC00871-202ENST00000556071 DHRS4L2Q6PKH6 230 aa-0.2□□□□□ -2.44
LINC00871-202ENST00000556071 CEP19Q96LK0 163 aa-0.2□□□□□ -2.44
LINC00871-202ENST00000556071 SS18L2Q9UHA2 77 aa-0.2□□□□□ -2.44
LINC00871-202ENST00000556071 NAT8BQ9UHF3 227 aa-0.2□□□□□ -2.44
LINC00871-202ENST00000556071 TTC28Q96AY4 2481 aa-0.21□□□□□ -2.44
LINC00871-202ENST00000556071 TMED2Q15363 201 aa-0.21□□□□□ -2.44
LINC00871-202ENST00000556071 MALSU1Q96EH3 234 aa-0.21□□□□□ -2.44
LINC00871-202ENST00000556071 PBDC1Q9BVG4 233 aa-0.21□□□□□ -2.44
LINC00871-202ENST00000556071 HIVEP3Q5T1R4 2406 aa-0.21□□□□□ -2.44
LINC00871-202ENST00000556071 ASXL3Q9C0F0 2248 aa-0.21□□□□□ -2.44
LINC00871-202ENST00000556071 HMCN2Q8NDA2 5059 aa-0.22□□□□□ -2.44
LINC00871-202ENST00000556071 FLNCQ14315 2725 aa-0.22□□□□□ -2.44
LINC00871-202ENST00000556071 SULT1C4O75897 302 aa-0.22□□□□□ -2.44
LINC00871-202ENST00000556071 IGHV3-30P01768 117 aa-0.22□□□□□ -2.44
LINC00871-202ENST00000556071 IGHV3-30-5P0DP03 117 aa-0.22□□□□□ -2.44
LINC00871-202ENST00000556071 NEDD8Q15843 81 aa-0.22□□□□□ -2.44
LINC00871-202ENST00000556071 C10orf99Q6UWK7 81 aa-0.22□□□□□ -2.44
LINC00871-202ENST00000556071 MUC2Q02817 5179 aa-0.22□□□□□ -2.45
LINC00871-202ENST00000556071 ANK2Q01484 3957 aa-0.22□□□□□ -2.45
LINC00871-202ENST00000556071 PIAS1O75925 651 aa-0.23□□□□□ -2.45
LINC00871-202ENST00000556071 CST7O76096 145 aa-0.23□□□□□ -2.45
LINC00871-202ENST00000556071 RPL35P42766 123 aaKnown RBP-0.23□□□□□ -2.45
LINC00871-202ENST00000556071 ASB16-AS1Q495Z4 193 aa-0.23□□□□□ -2.45
LINC00871-202ENST00000556071 HACD4Q5VWC8 232 aa-0.23□□□□□ -2.45
LINC00871-202ENST00000556071 LYG2Q86SG7 212 aa-0.23□□□□□ -2.45
LINC00871-202ENST00000556071 TPRKBQ9Y3C4 175 aa-0.23□□□□□ -2.45
LINC00871-202ENST00000556071 CAMSAP2Q08AD1 1489 aa-0.23□□□□□ -2.45
LINC00871-202ENST00000556071 MYH3P11055 1940 aa-0.24□□□□□ -2.45
LINC00871-202ENST00000556071 PPP1R2P41236 205 aa-0.24□□□□□ -2.45
LINC00871-202ENST00000556071 C5orf17Q8NAS9 161 aa-0.24□□□□□ -2.45
LINC00871-202ENST00000556071 MNS1Q8NEH6 495 aa-0.24□□□□□ -2.45
LINC00871-202ENST00000556071 OR4C12Q96R67 309 aa-0.24□□□□□ -2.45
LINC00871-202ENST00000556071 EFCAB11Q9BUY7 163 aa-0.24□□□□□ -2.45
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms