RNA–Protein interactions for RNA: ENST00000555462.5

PPP4R3A-208, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3A, Length 3,236 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-208ENST00000555462 ERCC8Q13216 396 aa13.45□□□□□ -0.26
PPP4R3A-208ENST00000555462 Q6ZQT7 251 aa13.44□□□□□ -0.26
PPP4R3A-208ENST00000555462 PIP4P2Q8N4L2 257 aa13.44□□□□□ -0.26
PPP4R3A-208ENST00000555462 OR10AG1Q8NH19 301 aa13.44□□□□□ -0.26
PPP4R3A-208ENST00000555462 OTORQ9NRC9 128 aa13.44□□□□□ -0.26
PPP4R3A-208ENST00000555462 CKS2P33552 79 aa13.44□□□□□ -0.26
PPP4R3A-208ENST00000555462 CSN1S1P47710 185 aa13.44□□□□□ -0.26
PPP4R3A-208ENST00000555462 MEF2CQ06413 473 aaPredicted RBP13.44□□□□□ -0.26
PPP4R3A-208ENST00000555462 TMEM155Q4W5P6 130 aa13.44□□□□□ -0.26
PPP4R3A-208ENST00000555462 TMEM97Q5BJF2 176 aa13.44□□□□□ -0.26
PPP4R3A-208ENST00000555462 GFRALQ6UXV0 394 aa13.44□□□□□ -0.26
PPP4R3A-208ENST00000555462 RIGQ13278 110 aa13.43□□□□□ -0.26
PPP4R3A-208ENST00000555462 IGFL2Q6UWQ7 119 aa13.43□□□□□ -0.26
PPP4R3A-208ENST00000555462 ABHD17AQ96GS6 310 aa13.43□□□□□ -0.26
PPP4R3A-208ENST00000555462 VGLL1Q99990 258 aa13.43□□□□□ -0.26
PPP4R3A-208ENST00000555462 TRBV19A0A075B6N1 114 aa13.43□□□□□ -0.26
PPP4R3A-208ENST00000555462 PPIAL4CA0A0B4J2A2 164 aa13.43□□□□□ -0.26
PPP4R3A-208ENST00000555462 FAM90A27PA6NNH2 459 aa13.43□□□□□ -0.26
PPP4R3A-208ENST00000555462 PRRG2O14669 202 aa13.43□□□□□ -0.26
PPP4R3A-208ENST00000555462 NPYP01303 97 aa13.43□□□□□ -0.26
PPP4R3A-208ENST00000555462 PPIAL4GP0DN37 164 aa13.43□□□□□ -0.26
PPP4R3A-208ENST00000555462 GCSHP23434 173 aa13.43□□□□□ -0.26
PPP4R3A-208ENST00000555462 MC5RP33032 325 aa13.43□□□□□ -0.26
PPP4R3A-208ENST00000555462 RNF182Q8N6D2 247 aa13.43□□□□□ -0.26
PPP4R3A-208ENST00000555462 RNF125Q96EQ8 232 aa13.43□□□□□ -0.26
PPP4R3A-208ENST00000555462 NDFIP1Q9BT67 221 aa13.43□□□□□ -0.26
PPP4R3A-208ENST00000555462 A0A096LNJ9 63 aa13.43□□□□□ -0.26
PPP4R3A-208ENST00000555462 TMEM189A5PLL7 270 aa13.43□□□□□ -0.26
PPP4R3A-208ENST00000555462 CDKN1BP46527 198 aa13.43□□□□□ -0.26
PPP4R3A-208ENST00000555462 LINC00574Q9H8X3 128 aa13.43□□□□□ -0.26
PPP4R3A-208ENST00000555462 USP9YO00507 2555 aaPredicted RBP13.42□□□□□ -0.26
PPP4R3A-208ENST00000555462 LGALS7P47929 136 aa13.42□□□□□ -0.26
PPP4R3A-208ENST00000555462 ZNF80P51504 273 aaPredicted RBP13.42□□□□□ -0.26
PPP4R3A-208ENST00000555462 BUB1B-PAK6H3BSN5 160 aa13.42□□□□□ -0.26
PPP4R3A-208ENST00000555462 CRYGCP07315 174 aa13.42□□□□□ -0.26
PPP4R3A-208ENST00000555462 PET117Q6UWS5 81 aa13.42□□□□□ -0.26
PPP4R3A-208ENST00000555462 C2CD3Q4AC94 2353 aa13.42□□□□□ -0.26
PPP4R3A-208ENST00000555462 SH2D1AO60880 128 aa13.41□□□□□ -0.26
PPP4R3A-208ENST00000555462 RPL24P83731 157 aaKnown RBP13.41□□□□□ -0.26
PPP4R3A-208ENST00000555462 SIGLEC15Q6ZMC9 328 aa13.41□□□□□ -0.26
PPP4R3A-208ENST00000555462 KLK15Q9H2R5 256 aa13.41□□□□□ -0.26
PPP4R3A-208ENST00000555462 K7EIM0 57 aa13.41□□□□□ -0.26
PPP4R3A-208ENST00000555462 HIST1H1AQ02539 215 aaPredicted RBP13.41□□□□□ -0.26
PPP4R3A-208ENST00000555462 SAPCD1Q5SSQ6 148 aa13.41□□□□□ -0.26
PPP4R3A-208ENST00000555462 SFTA2Q6UW10 78 aa13.41□□□□□ -0.26
PPP4R3A-208ENST00000555462 ZNF491Q8N8L2 437 aa13.41□□□□□ -0.26
PPP4R3A-208ENST00000555462 TRAV26-2A0A0B4J265 109 aa13.41□□□□□ -0.26
PPP4R3A-208ENST00000555462 I3L2K1 104 aa13.41□□□□□ -0.26
PPP4R3A-208ENST00000555462 HAX1O00165 279 aa13.41□□□□□ -0.26
PPP4R3A-208ENST00000555462 PRSS1P07477 247 aa13.41□□□□□ -0.26
PPP4R3A-208ENST00000555462 FCER1GP30273 86 aa13.41□□□□□ -0.26
PPP4R3A-208ENST00000555462 ATP5IP56385 69 aaPredicted RBP13.41□□□□□ -0.26
PPP4R3A-208ENST00000555462 KIR3DS1Q14943 382 aa13.41□□□□□ -0.26
PPP4R3A-208ENST00000555462 SCNM1Q9BWG6 230 aa13.41□□□□□ -0.26
PPP4R3A-208ENST00000555462 HIVEP3Q5T1R4 2406 aa13.4□□□□□ -0.26
PPP4R3A-208ENST00000555462 CRXO43186 299 aaPredicted RBP13.4□□□□□ -0.26
PPP4R3A-208ENST00000555462 EGR2P11161 476 aaPredicted RBP13.4□□□□□ -0.26
PPP4R3A-208ENST00000555462 MRPL51Q4U2R6 128 aaKnown RBP13.4□□□□□ -0.26
PPP4R3A-208ENST00000555462 POLQO75417 2590 aa13.4□□□□□ -0.26
PPP4R3A-208ENST00000555462 COX8AP10176 69 aa13.4□□□□□ -0.26
PPP4R3A-208ENST00000555462 PSG3Q16557 428 aa13.4□□□□□ -0.26
PPP4R3A-208ENST00000555462 LINC01545Q5VT33 79 aa13.4□□□□□ -0.26
PPP4R3A-208ENST00000555462 FAM169BQ8N8A8 192 aa13.4□□□□□ -0.26
PPP4R3A-208ENST00000555462 CELSR2Q9HCU4 2923 aa13.4□□□□□ -0.26
PPP4R3A-208ENST00000555462 DLX6P56179 175 aa13.39□□□□□ -0.27
PPP4R3A-208ENST00000555462 ZNF414Q96IQ9 312 aa13.39□□□□□ -0.27
PPP4R3A-208ENST00000555462 IGKV3-7A0A075B6H7 116 aa13.39□□□□□ -0.27
PPP4R3A-208ENST00000555462 GTSCR1Q86UQ5 136 aa13.39□□□□□ -0.27
PPP4R3A-208ENST00000555462 FAM57AQ8TBR7 257 aa13.39□□□□□ -0.27
PPP4R3A-208ENST00000555462 ZNF492Q9P255 531 aa13.39□□□□□ -0.27
PPP4R3A-208ENST00000555462 IGKV2D-26A0A0A0MRZ7 120 aa13.38□□□□□ -0.27
PPP4R3A-208ENST00000555462 K7EQM0 130 aa13.38□□□□□ -0.27
PPP4R3A-208ENST00000555462 AAMDCQ9H7C9 122 aa13.38□□□□□ -0.27
PPP4R3A-208ENST00000555462 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.38□□□□□ -0.27
PPP4R3A-208ENST00000555462 LINC00527Q9UJ94 153 aa13.38□□□□□ -0.27
PPP4R3A-208ENST00000555462 PRAC2D3DTV9 90 aa13.37□□□□□ -0.27
PPP4R3A-208ENST00000555462 OVOL3O00110 214 aa13.37□□□□□ -0.27
PPP4R3A-208ENST00000555462 DEFB1P60022 68 aa13.37□□□□□ -0.27
PPP4R3A-208ENST00000555462 Q6ZS92 163 aa13.37□□□□□ -0.27
PPP4R3A-208ENST00000555462 OR4A5Q8NH83 315 aa13.37□□□□□ -0.27
PPP4R3A-208ENST00000555462 NCOR1P1Q9H4R4 102 aa13.37□□□□□ -0.27
PPP4R3A-208ENST00000555462 PEF1Q9UBV8 284 aaKnown RBP13.37□□□□□ -0.27
PPP4R3A-208ENST00000555462 CD5LO43866 347 aa13.37□□□□□ -0.27
PPP4R3A-208ENST00000555462 SHANK2-AS3Q9BTD1 123 aa13.37□□□□□ -0.27
PPP4R3A-208ENST00000555462 UFC1Q9Y3C8 167 aa13.37□□□□□ -0.27
PPP4R3A-208ENST00000555462 NDPQ00604 133 aa13.36□□□□□ -0.27
PPP4R3A-208ENST00000555462 FAM162BQ5T6X4 162 aa13.36□□□□□ -0.27
PPP4R3A-208ENST00000555462 ORMDL3Q8N138 153 aa13.36□□□□□ -0.27
PPP4R3A-208ENST00000555462 IFI27L1Q96BM0 104 aa13.36□□□□□ -0.27
PPP4R3A-208ENST00000555462 TLN2Q9Y4G6 2542 aa13.36□□□□□ -0.27
PPP4R3A-208ENST00000555462 A1L4Q6 167 aa13.36□□□□□ -0.27
PPP4R3A-208ENST00000555462 A0A0G2JLM5 398 aa13.35□□□□□ -0.27
PPP4R3A-208ENST00000555462 NPIPB6E9PJ23 425 aa13.35□□□□□ -0.27
PPP4R3A-208ENST00000555462 IGLV1-47P01700 117 aa13.35□□□□□ -0.27
PPP4R3A-208ENST00000555462 TMEM160Q9NX00 188 aa13.35□□□□□ -0.27
PPP4R3A-208ENST00000555462 LEPP41159 167 aa13.35□□□□□ -0.27
PPP4R3A-208ENST00000555462 ECSCRQ19T08 205 aa13.35□□□□□ -0.27
PPP4R3A-208ENST00000555462 SHISA9B4DS77 424 aa13.35□□□□□ -0.27
PPP4R3A-208ENST00000555462 CT83Q5H943 113 aa13.34□□□□□ -0.27
PPP4R3A-208ENST00000555462 FAM104BQ5XKR9 115 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms