RNA–Protein interactions for RNA: ENST00000555252.5

MTHFD1-210, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 1 (best)

Gene MTHFD1, Length 2,053 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-210ENST00000555252 PDE6HQ13956 83 aa8.42□□□□□ -1.06
MTHFD1-210ENST00000555252 PRR30Q53SZ7 412 aaPredicted RBP8.42□□□□□ -1.06
MTHFD1-210ENST00000555252 SIGLEC9Q9Y336 463 aa8.42□□□□□ -1.06
MTHFD1-210ENST00000555252 F11RQ9Y624 299 aaKnown RBP8.42□□□□□ -1.06
MTHFD1-210ENST00000555252 IGHV1-3A0A0C4DH29 117 aa8.42□□□□□ -1.06
MTHFD1-210ENST00000555252 IGHV3-48P01763 117 aa8.42□□□□□ -1.06
MTHFD1-210ENST00000555252 SRSF2Q01130 221 aaKnown RBP8.42□□□□□ -1.06
MTHFD1-210ENST00000555252 CD300EQ496F6 205 aaPredicted RBP8.42□□□□□ -1.06
MTHFD1-210ENST00000555252 SHANK2-AS3Q9BTD1 123 aa8.42□□□□□ -1.06
MTHFD1-210ENST00000555252 TM2D2Q9BX73 214 aa8.42□□□□□ -1.06
MTHFD1-210ENST00000555252 TPSG1Q9NRR2 321 aa8.42□□□□□ -1.06
MTHFD1-210ENST00000555252 DMXL2Q8TDJ6 3036 aa8.42□□□□□ -1.06
MTHFD1-210ENST00000555252 PPIAL4CA0A0B4J2A2 164 aa8.41□□□□□ -1.06
MTHFD1-210ENST00000555252 H3BRN7 92 aa8.41□□□□□ -1.06
MTHFD1-210ENST00000555252 NDUFS7O75251 213 aa8.41□□□□□ -1.06
MTHFD1-210ENST00000555252 EVI2AP22794 236 aa8.41□□□□□ -1.06
MTHFD1-210ENST00000555252 LYZP61626 148 aa8.41□□□□□ -1.06
MTHFD1-210ENST00000555252 PRSS57Q6UWY2 283 aa8.41□□□□□ -1.06
MTHFD1-210ENST00000555252 SIGLEC15Q6ZMC9 328 aa8.41□□□□□ -1.06
MTHFD1-210ENST00000555252 PPP1R27Q86WC6 154 aa8.41□□□□□ -1.06
MTHFD1-210ENST00000555252 EXOC3-AS1Q8N2X6 119 aa8.41□□□□□ -1.06
MTHFD1-210ENST00000555252 RAB37Q96AX2 223 aa8.41□□□□□ -1.06
MTHFD1-210ENST00000555252 SPATA25Q9BR10 227 aa8.41□□□□□ -1.06
MTHFD1-210ENST00000555252 FAM106CPP0CH98 169 aa8.41□□□□□ -1.06
MTHFD1-210ENST00000555252 NMUP48645 174 aa8.41□□□□□ -1.06
MTHFD1-210ENST00000555252 LOXL1Q08397 574 aaPredicted RBP8.41□□□□□ -1.06
MTHFD1-210ENST00000555252 FAM106AQ4KMX7 169 aa8.41□□□□□ -1.06
MTHFD1-210ENST00000555252 MRPL51Q4U2R6 128 aaKnown RBP8.41□□□□□ -1.06
MTHFD1-210ENST00000555252 RPEQ96AT9 228 aa8.41□□□□□ -1.06
MTHFD1-210ENST00000555252 RASL11BQ9BPW5 248 aa8.41□□□□□ -1.06
MTHFD1-210ENST00000555252 IGHV3-72A0A0B4J1Y9 119 aa8.4□□□□□ -1.06
MTHFD1-210ENST00000555252 TEX48A0A1B0GUV7 120 aa8.4□□□□□ -1.06
MTHFD1-210ENST00000555252 CRIP1P50238 77 aa8.4□□□□□ -1.06
MTHFD1-210ENST00000555252 ZNF672Q499Z4 452 aaPredicted RBP8.4□□□□□ -1.06
MTHFD1-210ENST00000555252 HCP5Q6MZN7 132 aa8.4□□□□□ -1.06
MTHFD1-210ENST00000555252 LYZL1Q6UWQ5 148 aa8.4□□□□□ -1.06
MTHFD1-210ENST00000555252 PCP2Q8IVA1 136 aa8.4□□□□□ -1.06
MTHFD1-210ENST00000555252 BCL6BQ8N143 479 aaPredicted RBP8.4□□□□□ -1.06
MTHFD1-210ENST00000555252 PHLDA1Q8WV24 401 aaPredicted RBP8.4□□□□□ -1.06
MTHFD1-210ENST00000555252 TEX22C9J3V5 150 aa8.39□□□□□ -1.07
MTHFD1-210ENST00000555252 E9PLD3 99 aa8.39□□□□□ -1.07
MTHFD1-210ENST00000555252 ATP5LO75964 103 aa8.39□□□□□ -1.07
MTHFD1-210ENST00000555252 UCNP55089 124 aa8.39□□□□□ -1.07
MTHFD1-210ENST00000555252 RPL24P83731 157 aaKnown RBP8.39□□□□□ -1.07
MTHFD1-210ENST00000555252 CHAC1Q9BUX1 264 aa8.39□□□□□ -1.07
MTHFD1-210ENST00000555252 MAP1LC3AQ9H492 121 aa8.39□□□□□ -1.07
MTHFD1-210ENST00000555252 NXT2Q9NPJ8 142 aaKnown RBP8.39□□□□□ -1.07
MTHFD1-210ENST00000555252 NCOR2Q9Y618 2525 aa8.39□□□□□ -1.07
MTHFD1-210ENST00000555252 LOC389332A0A1B0GUA5 103 aa8.39□□□□□ -1.07
MTHFD1-210ENST00000555252 LY6LH3BQJ8 138 aa8.39□□□□□ -1.07
MTHFD1-210ENST00000555252 H3BTX0 84 aa8.39□□□□□ -1.07
MTHFD1-210ENST00000555252 I3L2K1 104 aa8.39□□□□□ -1.07
MTHFD1-210ENST00000555252 AZU1P20160 251 aa8.39□□□□□ -1.07
MTHFD1-210ENST00000555252 FCER1GP30273 86 aa8.39□□□□□ -1.07
MTHFD1-210ENST00000555252 CKS2P33552 79 aa8.39□□□□□ -1.07
MTHFD1-210ENST00000555252 RUSC1-AS1Q66K80 236 aa8.39□□□□□ -1.07
MTHFD1-210ENST00000555252 AMN1Q8IY45 258 aa8.39□□□□□ -1.07
MTHFD1-210ENST00000555252 CEND1Q8N111 149 aa8.39□□□□□ -1.07
MTHFD1-210ENST00000555252 LY6G5BQ8NDX9 201 aa8.39□□□□□ -1.07
MTHFD1-210ENST00000555252 ZNF502Q8TBZ5 544 aa8.39□□□□□ -1.07
MTHFD1-210ENST00000555252 RAB1BQ9H0U4 201 aa8.39□□□□□ -1.07
MTHFD1-210ENST00000555252 APC2O95996 2303 aa8.39□□□□□ -1.07
MTHFD1-210ENST00000555252 PLCE1Q9P212 2302 aa8.38□□□□□ -1.07
MTHFD1-210ENST00000555252 WI2-2373I1.2A0A1W2PRP0 233 aa8.38□□□□□ -1.07
MTHFD1-210ENST00000555252 GAGE12HA6NDE8 117 aa8.38□□□□□ -1.07
MTHFD1-210ENST00000555252 LINC01619G3V211 115 aa8.38□□□□□ -1.07
MTHFD1-210ENST00000555252 MRPS12O15235 138 aaKnown RBP8.38□□□□□ -1.07
MTHFD1-210ENST00000555252 GCSHP23434 173 aa8.38□□□□□ -1.07
MTHFD1-210ENST00000555252 ODF1Q14990 250 aa8.38□□□□□ -1.07
MTHFD1-210ENST00000555252 LINC01560Q8TB33 94 aa8.38□□□□□ -1.07
MTHFD1-210ENST00000555252 ATP6V0BQ99437 205 aa8.38□□□□□ -1.07
MTHFD1-210ENST00000555252 NAA38Q9BRA0 125 aaKnown RBP8.38□□□□□ -1.07
MTHFD1-210ENST00000555252 AAMDCQ9H7C9 122 aa8.38□□□□□ -1.07
MTHFD1-210ENST00000555252 MGAQ8IWI9 3026 aa8.38□□□□□ -1.07
MTHFD1-210ENST00000555252 GNG7O60262 68 aa8.38□□□□□ -1.07
MTHFD1-210ENST00000555252 IGKCP01834 107 aa8.38□□□□□ -1.07
MTHFD1-210ENST00000555252 COX7A1P24310 79 aa8.38□□□□□ -1.07
MTHFD1-210ENST00000555252 CNTFRP26992 372 aa8.38□□□□□ -1.07
MTHFD1-210ENST00000555252 FCGR2BP31994 310 aaPredicted RBP8.38□□□□□ -1.07
MTHFD1-210ENST00000555252 FXYD2P54710 66 aa8.38□□□□□ -1.07
MTHFD1-210ENST00000555252 TCTEX1D4Q5JR98 221 aa8.38□□□□□ -1.07
MTHFD1-210ENST00000555252 TIMD4Q96H15 378 aa8.38□□□□□ -1.07
MTHFD1-210ENST00000555252 CNFNQ9BYD5 112 aa8.38□□□□□ -1.07
MTHFD1-210ENST00000555252 SPANXB1Q9NS25 103 aaPredicted RBP8.38□□□□□ -1.07
MTHFD1-210ENST00000555252 HHLA3Q9XRX5 114 aa8.38□□□□□ -1.07
MTHFD1-210ENST00000555252 PRRC2CQ9Y520 2896 aaKnown RBP8.37□□□□□ -1.07
MTHFD1-210ENST00000555252 IGF2RP11717 2491 aa8.37□□□□□ -1.07
MTHFD1-210ENST00000555252 A0A1W2PRD5 423 aa8.37□□□□□ -1.07
MTHFD1-210ENST00000555252 A0A1W2PRF3 423 aa8.37□□□□□ -1.07
MTHFD1-210ENST00000555252 A0A1W2PRM7 423 aa8.37□□□□□ -1.07
MTHFD1-210ENST00000555252 TMEM213A2RRL7 107 aa8.37□□□□□ -1.07
MTHFD1-210ENST00000555252 FAM90A27PA6NNH2 459 aa8.37□□□□□ -1.07
MTHFD1-210ENST00000555252 NPYP01303 97 aa8.37□□□□□ -1.07
MTHFD1-210ENST00000555252 TWIST1Q15672 202 aa8.37□□□□□ -1.07
MTHFD1-210ENST00000555252 MTURNQ8N3F0 131 aa8.37□□□□□ -1.07
MTHFD1-210ENST00000555252 OR11H6Q8NGC7 330 aa8.37□□□□□ -1.07
MTHFD1-210ENST00000555252 FBXL15Q9H469 300 aa8.37□□□□□ -1.07
MTHFD1-210ENST00000555252 DKK2Q9UBU2 259 aa8.37□□□□□ -1.07
MTHFD1-210ENST00000555252 MSRB2Q9Y3D2 182 aa8.37□□□□□ -1.07
MTHFD1-210ENST00000555252 PLXNB1O43157 2135 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 99.7 ms