RNA–Protein interactions for RNA: ENST00000554486.1

SCFD1-212, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-212ENST00000554486 ZNF98A6NK75 572 aa4.72□□□□□ -1.65
SCFD1-212ENST00000554486 UMAD1C9J7I0 102 aa4.72□□□□□ -1.65
SCFD1-212ENST00000554486 M0QZ24 198 aa4.72□□□□□ -1.65
SCFD1-212ENST00000554486 BUB3O43684 328 aa4.72□□□□□ -1.65
SCFD1-212ENST00000554486 MBP02144 154 aa4.72□□□□□ -1.65
SCFD1-212ENST00000554486 IGHV4-30-4P0DP06 118 aa4.72□□□□□ -1.65
SCFD1-212ENST00000554486 CBLN1P23435 193 aa4.72□□□□□ -1.65
SCFD1-212ENST00000554486 SULT1A2P50226 295 aa4.72□□□□□ -1.65
SCFD1-212ENST00000554486 FAM78BQ5VT40 261 aa4.72□□□□□ -1.65
SCFD1-212ENST00000554486 EIF5AL1Q6IS14 154 aaKnown RBP4.72□□□□□ -1.65
SCFD1-212ENST00000554486 C16orf54Q6UWD8 224 aa4.72□□□□□ -1.65
SCFD1-212ENST00000554486 TEX261Q6UWH6 196 aa4.72□□□□□ -1.65
SCFD1-212ENST00000554486 SSX7Q7RTT5 188 aa4.72□□□□□ -1.65
SCFD1-212ENST00000554486 LINC00305Q7Z4B0 112 aa4.72□□□□□ -1.65
SCFD1-212ENST00000554486 ZNF680Q8NEM1 530 aa4.72□□□□□ -1.65
SCFD1-212ENST00000554486 WFDC9Q8NEX5 89 aa4.72□□□□□ -1.65
SCFD1-212ENST00000554486 PFDN5Q99471 154 aa4.72□□□□□ -1.65
SCFD1-212ENST00000554486 RHPN1-AS1Q9BWJ2 59 aa4.72□□□□□ -1.65
SCFD1-212ENST00000554486 SLC25A22Q9H936 323 aa4.72□□□□□ -1.65
SCFD1-212ENST00000554486 TECRQ9NZ01 308 aaKnown RBP4.72□□□□□ -1.65
SCFD1-212ENST00000554486 MLXQ9UH92 298 aa4.72□□□□□ -1.65
SCFD1-212ENST00000554486 FUT9Q9Y231 359 aa4.72□□□□□ -1.65
SCFD1-212ENST00000554486 SELENOKQ9Y6D0 94 aa4.72□□□□□ -1.65
SCFD1-212ENST00000554486 MRPS12O15235 138 aaKnown RBP4.71□□□□□ -1.66
SCFD1-212ENST00000554486 HMGB3O15347 200 aaKnown RBP4.71□□□□□ -1.66
SCFD1-212ENST00000554486 GP9P14770 177 aa4.71□□□□□ -1.66
SCFD1-212ENST00000554486 CDC34P49427 236 aaPredicted RBP4.71□□□□□ -1.66
SCFD1-212ENST00000554486 RAB5CP51148 216 aa4.71□□□□□ -1.66
SCFD1-212ENST00000554486 RHOBP62745 196 aa4.71□□□□□ -1.66
SCFD1-212ENST00000554486 C1orf194Q5T5A4 169 aa4.71□□□□□ -1.66
SCFD1-212ENST00000554486 DPPA3Q6W0C5 159 aa4.71□□□□□ -1.66
SCFD1-212ENST00000554486 FAM213BQ8TBF2 198 aa4.71□□□□□ -1.66
SCFD1-212ENST00000554486 MARC2Q969Z3 335 aa4.71□□□□□ -1.66
SCFD1-212ENST00000554486 C17orf77Q96MU5 243 aa4.71□□□□□ -1.66
SCFD1-212ENST00000554486 RNF2Q99496 336 aa4.71□□□□□ -1.66
SCFD1-212ENST00000554486 SLC25A2Q9BXI2 301 aa4.71□□□□□ -1.66
SCFD1-212ENST00000554486 MRPL32Q9BYC8 188 aaKnown RBP4.71□□□□□ -1.66
SCFD1-212ENST00000554486 ACTR3CQ9C0K3 210 aaPredicted RBP4.71□□□□□ -1.66
SCFD1-212ENST00000554486 SIGLEC8Q9NYZ4 499 aa4.71□□□□□ -1.66
SCFD1-212ENST00000554486 PAM16Q9Y3D7 125 aa4.71□□□□□ -1.66
SCFD1-212ENST00000554486 SMAD5-AS1Q9Y6J3 95 aa4.71□□□□□ -1.66
SCFD1-212ENST00000554486 DNHD1Q96M86 4753 aa4.71□□□□□ -1.66
SCFD1-212ENST00000554486 MGAM2Q2M2H8 2515 aa4.7□□□□□ -1.66
SCFD1-212ENST00000554486 CTXND1A0A1B0GTU2 59 aa4.7□□□□□ -1.66
SCFD1-212ENST00000554486 A0A1W2PPV4 95 aa4.7□□□□□ -1.66
SCFD1-212ENST00000554486 A0A1W2PS18 150 aa4.7□□□□□ -1.66
SCFD1-212ENST00000554486 ZNF705EA8MWA4 302 aaPredicted RBP4.7□□□□□ -1.66
SCFD1-212ENST00000554486 IFNA7P01567 189 aa4.7□□□□□ -1.66
SCFD1-212ENST00000554486 STAG3L2P0CL84 134 aa4.7□□□□□ -1.66
SCFD1-212ENST00000554486 STAG3L3P0CL85 134 aa4.7□□□□□ -1.66
SCFD1-212ENST00000554486 ARL14EPLP0DKL9 152 aa4.7□□□□□ -1.66
SCFD1-212ENST00000554486 PYYP10082 97 aa4.7□□□□□ -1.66
SCFD1-212ENST00000554486 FGF8P55075 233 aaPredicted RBP4.7□□□□□ -1.66
SCFD1-212ENST00000554486 DEFB114Q30KQ6 69 aa4.7□□□□□ -1.66
SCFD1-212ENST00000554486 TCF24Q7RTU0 167 aa4.7□□□□□ -1.66
SCFD1-212ENST00000554486 S100A7AQ86SG5 101 aa4.7□□□□□ -1.66
SCFD1-212ENST00000554486 OR8I2Q8N0Y5 310 aa4.7□□□□□ -1.66
SCFD1-212ENST00000554486 MBD3L1Q8WWY6 194 aa4.7□□□□□ -1.66
SCFD1-212ENST00000554486 NARS2Q96I59 477 aaKnown RBP4.7□□□□□ -1.66
SCFD1-212ENST00000554486 TMEM231Q9H6L2 316 aa4.7□□□□□ -1.66
SCFD1-212ENST00000554486 TMEM14CQ9P0S9 112 aa4.7□□□□□ -1.66
SCFD1-212ENST00000554486 UBQLN2Q9UHD9 624 aa4.7□□□□□ -1.66
SCFD1-212ENST00000554486 NBEAL1Q6ZS30 2694 aa4.69□□□□□ -1.66
SCFD1-212ENST00000554486 TRAV1-1A0A0B4J248 108 aa4.69□□□□□ -1.66
SCFD1-212ENST00000554486 MAP1LC3B2A6NCE7 125 aa4.69□□□□□ -1.66
SCFD1-212ENST00000554486 IZUMO1RA6ND01 250 aa4.69□□□□□ -1.66
SCFD1-212ENST00000554486 H3BQ15 152 aa4.69□□□□□ -1.66
SCFD1-212ENST00000554486 OR7C2O60412 319 aa4.69□□□□□ -1.66
SCFD1-212ENST00000554486 SAP30O75446 220 aa4.69□□□□□ -1.66
SCFD1-212ENST00000554486 GAGE7O76087 117 aa4.69□□□□□ -1.66
SCFD1-212ENST00000554486 CXorf1O96002 111 aa4.69□□□□□ -1.66
SCFD1-212ENST00000554486 IGLV1-51P01701 117 aa4.69□□□□□ -1.66
SCFD1-212ENST00000554486 PRSS2P07478 247 aa4.69□□□□□ -1.66
SCFD1-212ENST00000554486 SNRPCP09234 159 aaKnown RBP4.69□□□□□ -1.66
SCFD1-212ENST00000554486 GAGE12FP0CL80 117 aa4.69□□□□□ -1.66
SCFD1-212ENST00000554486 GAGE12GP0CL81 117 aa4.69□□□□□ -1.66
SCFD1-212ENST00000554486 GAGE12IP0CL82 117 aa4.69□□□□□ -1.66
SCFD1-212ENST00000554486 IGLC2P0DOY2 106 aa4.69□□□□□ -1.66
SCFD1-212ENST00000554486 HIST1H1EP10412 219 aaKnown RBP4.69□□□□□ -1.66
SCFD1-212ENST00000554486 IGLL1P15814 213 aa4.69□□□□□ -1.66
SCFD1-212ENST00000554486 RPL7P18124 248 aaKnown RBP4.69□□□□□ -1.66
SCFD1-212ENST00000554486 GCHFRP30047 84 aa4.69□□□□□ -1.66
SCFD1-212ENST00000554486 S100A7P31151 101 aa4.69□□□□□ -1.66
SCFD1-212ENST00000554486 BMI1P35226 326 aa4.69□□□□□ -1.66
SCFD1-212ENST00000554486 TAS2R45P59539 299 aa4.69□□□□□ -1.66
SCFD1-212ENST00000554486 GAGE1Q13065 139 aa4.69□□□□□ -1.66
SCFD1-212ENST00000554486 GAGE4Q13068 117 aa4.69□□□□□ -1.66
SCFD1-212ENST00000554486 KHDC3LQ587J8 217 aa4.69□□□□□ -1.66
SCFD1-212ENST00000554486 WDR73Q6P4I2 378 aa4.69□□□□□ -1.66
SCFD1-212ENST00000554486 CFAP161Q6P656 301 aa4.69□□□□□ -1.66
SCFD1-212ENST00000554486 LCN15Q6UWW0 184 aa4.69□□□□□ -1.66
SCFD1-212ENST00000554486 SIGLEC15Q6ZMC9 328 aa4.69□□□□□ -1.66
SCFD1-212ENST00000554486 BPIFA4PQ86YQ2 179 aa4.69□□□□□ -1.66
SCFD1-212ENST00000554486 TMEM61Q8N0U2 210 aa4.69□□□□□ -1.66
SCFD1-212ENST00000554486 SUN5Q8TC36 379 aa4.69□□□□□ -1.66
SCFD1-212ENST00000554486 DYNLRB2Q8TF09 96 aa4.69□□□□□ -1.66
SCFD1-212ENST00000554486 SFT2D1Q8WV19 159 aa4.69□□□□□ -1.66
SCFD1-212ENST00000554486 PCNPQ8WW12 178 aaKnown RBP4.69□□□□□ -1.66
SCFD1-212ENST00000554486 FXYD5Q96DB9 178 aa4.69□□□□□ -1.66
SCFD1-212ENST00000554486 SAT2Q96F10 170 aaPredicted RBP4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 101.9 ms