RNA–Protein interactions for RNA: ENST00000553823.5

NEK9-202, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-202ENST00000553823 LURAP1LQ8IV03 231 aa8.85□□□□□ -0.99
NEK9-202ENST00000553823 TMEM61Q8N0U2 210 aa8.85□□□□□ -0.99
NEK9-202ENST00000553823 DCANP1Q8TF63 244 aa8.85□□□□□ -0.99
NEK9-202ENST00000553823 MRPL53Q96EL3 112 aaKnown RBP8.85□□□□□ -0.99
NEK9-202ENST00000553823 ATG101Q9BSB4 218 aa8.85□□□□□ -0.99
NEK9-202ENST00000553823 RPH3ALQ9UNE2 315 aa8.85□□□□□ -0.99
NEK9-202ENST00000553823 TRAV2A0A0B4J234 112 aa8.84□□□□□ -0.99
NEK9-202ENST00000553823 F8W036 122 aa8.84□□□□□ -0.99
NEK9-202ENST00000553823 J3QL48 77 aa8.84□□□□□ -0.99
NEK9-202ENST00000553823 TSPAN4O14817 238 aa8.84□□□□□ -0.99
NEK9-202ENST00000553823 TCRAP04437 139 aa8.84□□□□□ -0.99
NEK9-202ENST00000553823 HLA-DMBP28068 263 aa8.84□□□□□ -0.99
NEK9-202ENST00000553823 AKR1C3P42330 323 aa8.84□□□□□ -0.99
NEK9-202ENST00000553823 TFPI2P48307 235 aa8.84□□□□□ -0.99
NEK9-202ENST00000553823 SMCPP49901 116 aaPredicted RBP8.84□□□□□ -0.99
NEK9-202ENST00000553823 CD300EQ496F6 205 aaPredicted RBP8.84□□□□□ -0.99
NEK9-202ENST00000553823 LCN12Q6JVE5 192 aa8.84□□□□□ -0.99
NEK9-202ENST00000553823 RNF182Q8N6D2 247 aa8.84□□□□□ -0.99
NEK9-202ENST00000553823 ARL6IP6Q8N6S5 226 aa8.84□□□□□ -0.99
NEK9-202ENST00000553823 C2CD4CQ8TF44 421 aa8.84□□□□□ -0.99
NEK9-202ENST00000553823 RPUSD4Q96CM3 377 aaKnown RBP8.84□□□□□ -0.99
NEK9-202ENST00000553823 LINC00052Q96N35 136 aa8.84□□□□□ -0.99
NEK9-202ENST00000553823 SEC11CQ9BY50 192 aa8.84□□□□□ -0.99
NEK9-202ENST00000553823 PARLQ9H300 379 aa8.84□□□□□ -0.99
NEK9-202ENST00000553823 VWFP04275 2813 aa8.83□□□□□ -1
NEK9-202ENST00000553823 DIRC3C9JPN6 131 aa8.83□□□□□ -1
NEK9-202ENST00000553823 K7EQG2 157 aa8.83□□□□□ -1
NEK9-202ENST00000553823 ADCYAP1P18509 176 aa8.83□□□□□ -1
NEK9-202ENST00000553823 S100A1P23297 94 aa8.83□□□□□ -1
NEK9-202ENST00000553823 CNN1P51911 297 aaKnown RBP8.83□□□□□ -1
NEK9-202ENST00000553823 PSG3Q16557 428 aa8.83□□□□□ -1
NEK9-202ENST00000553823 ZNF674Q2M3X9 581 aa8.83□□□□□ -1
NEK9-202ENST00000553823 FAM74A3Q4VXF1 159 aa8.83□□□□□ -1
NEK9-202ENST00000553823 GOLT1AQ6ZVE7 132 aa8.83□□□□□ -1
NEK9-202ENST00000553823 SMIM7Q9BQ49 75 aa8.83□□□□□ -1
NEK9-202ENST00000553823 DERL1Q9BUN8 251 aa8.83□□□□□ -1
NEK9-202ENST00000553823 AGRNO00468 2067 aa8.82□□□□□ -1
NEK9-202ENST00000553823 SERTM2A0A1B0GWG4 89 aa8.82□□□□□ -1
NEK9-202ENST00000553823 ZNF727A8MUV8 499 aa8.82□□□□□ -1
NEK9-202ENST00000553823 ZNF705FA8MVS1 300 aaPredicted RBP8.82□□□□□ -1
NEK9-202ENST00000553823 K7EQM0 130 aa8.82□□□□□ -1
NEK9-202ENST00000553823 IGLV1-51P01701 117 aa8.82□□□□□ -1
NEK9-202ENST00000553823 CD33P20138 364 aa8.82□□□□□ -1
NEK9-202ENST00000553823 RPL35P42766 123 aaKnown RBP8.82□□□□□ -1
NEK9-202ENST00000553823 SNRPD3P62318 126 aaKnown RBP8.82□□□□□ -1
NEK9-202ENST00000553823 C10orf91Q5T1B1 145 aa8.82□□□□□ -1
NEK9-202ENST00000553823 ZNF738Q8NE65 137 aa8.82□□□□□ -1
NEK9-202ENST00000553823 OR2K2Q8NGT1 345 aa8.82□□□□□ -1
NEK9-202ENST00000553823 C20orf173Q96LM9 149 aa8.82□□□□□ -1
NEK9-202ENST00000553823 SPAG8Q99932 426 aaPredicted RBP8.82□□□□□ -1
NEK9-202ENST00000553823 CARHSP1Q9Y2V2 147 aaKnown RBP8.82□□□□□ -1
NEK9-202ENST00000553823 TRAV34A0A0B4J273 112 aa8.81□□□□□ -1
NEK9-202ENST00000553823 IZUMO1RA6ND01 250 aa8.81□□□□□ -1
NEK9-202ENST00000553823 OR4C46A6NHA9 309 aa8.81□□□□□ -1
NEK9-202ENST00000553823 S100A9P06702 114 aaKnown RBP8.81□□□□□ -1
NEK9-202ENST00000553823 ZNF688P0C7X2 276 aa8.81□□□□□ -1
NEK9-202ENST00000553823 INSL3P51460 131 aa8.81□□□□□ -1
NEK9-202ENST00000553823 UBE2G1P62253 170 aa8.81□□□□□ -1
NEK9-202ENST00000553823 TMEM183BQ1AE95 376 aa8.81□□□□□ -1
NEK9-202ENST00000553823 C9orf66Q5T8R8 295 aa8.81□□□□□ -1
NEK9-202ENST00000553823 FAM24BQ8N5W8 94 aa8.81□□□□□ -1
NEK9-202ENST00000553823 WFDC9Q8NEX5 89 aa8.81□□□□□ -1
NEK9-202ENST00000553823 SPATA3Q8NHX4 192 aa8.81□□□□□ -1
NEK9-202ENST00000553823 FMC1Q96HJ9 113 aa8.81□□□□□ -1
NEK9-202ENST00000553823 LINC00479Q96M42 142 aa8.81□□□□□ -1
NEK9-202ENST00000553823 MCRIP2Q9BUT9 160 aaKnown RBP8.81□□□□□ -1
NEK9-202ENST00000553823 KLF12Q9Y4X4 402 aa8.81□□□□□ -1
NEK9-202ENST00000553823 IGKV2-40A0A087WW87 121 aaPredicted RBP8.8□□□□□ -1
NEK9-202ENST00000553823 RBAKDNA6NC62 111 aa8.8□□□□□ -1
NEK9-202ENST00000553823 PRAC2D3DTV9 90 aa8.8□□□□□ -1
NEK9-202ENST00000553823 IGKV2D-40P01614 121 aaPredicted RBP8.8□□□□□ -1
NEK9-202ENST00000553823 APOC3P02656 99 aa8.8□□□□□ -1
NEK9-202ENST00000553823 PRB4P10163 310 aaPredicted RBP8.8□□□□□ -1
NEK9-202ENST00000553823 TAS2R60P59551 318 aa8.8□□□□□ -1
NEK9-202ENST00000553823 GUCA2BQ16661 112 aa8.8□□□□□ -1
NEK9-202ENST00000553823 TMEM75Q8N9X5 138 aa8.8□□□□□ -1
NEK9-202ENST00000553823 NIPSNAP3BQ9BS92 247 aa8.8□□□□□ -1
NEK9-202ENST00000553823 TRAV8-1A0A0A6YYK1 113 aa8.79□□□□□ -1
NEK9-202ENST00000553823 TRBV6-1A0A0K0K1D8 114 aa8.79□□□□□ -1
NEK9-202ENST00000553823 FBLL1A6NHQ2 334 aaKnown RBP8.79□□□□□ -1
NEK9-202ENST00000553823 C9JCJ5 164 aa8.79□□□□□ -1
NEK9-202ENST00000553823 IGLV2-11P01706 119 aa8.79□□□□□ -1
NEK9-202ENST00000553823 GNG4P50150 75 aa8.79□□□□□ -1
NEK9-202ENST00000553823 FLI1Q01543 452 aaPredicted RBP8.79□□□□□ -1
NEK9-202ENST00000553823 TMEM241Q24JQ0 296 aa8.79□□□□□ -1
NEK9-202ENST00000553823 CENPWQ5EE01 88 aa8.79□□□□□ -1
NEK9-202ENST00000553823 PSMG4Q5JS54 123 aa8.79□□□□□ -1
NEK9-202ENST00000553823 TVP23CQ96ET8 276 aa8.79□□□□□ -1
NEK9-202ENST00000553823 SGK494Q96LW2 274 aa8.79□□□□□ -1
NEK9-202ENST00000553823 IGF2BP2-AS1Q96M15 143 aa8.79□□□□□ -1
NEK9-202ENST00000553823 NAT8Q9UHE5 227 aa8.79□□□□□ -1
NEK9-202ENST00000553823 ZNF256Q9Y2P7 627 aaPredicted RBP8.79□□□□□ -1
NEK9-202ENST00000553823 TRBV20OR9-2A0A075B6H5 130 aa8.78□□□□□ -1
NEK9-202ENST00000553823 PRNTQ86SH4 94 aa8.78□□□□□ -1
NEK9-202ENST00000553823 BAGE2Q86Y30 109 aa8.78□□□□□ -1
NEK9-202ENST00000553823 OR10J6PQ8NGY7 276 aa8.78□□□□□ -1
NEK9-202ENST00000553823 MDFIQ99750 246 aa8.78□□□□□ -1
NEK9-202ENST00000553823 VGLL1Q99990 258 aa8.78□□□□□ -1
NEK9-202ENST00000553823 SDF2L1Q9HCN8 221 aa8.78□□□□□ -1
NEK9-202ENST00000553823 PSG8Q9UQ74 426 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms