RNA–Protein interactions for RNA: ENST00000553612.5

GTF2A1-203, Transcript of general transcription factor IIA subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2A1, Length 6,306 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-203ENST00000553612 CFC1P0CG37 223 aa7.22□□□□□ -1.25
GTF2A1-203ENST00000553612 SLC25A15Q9Y619 301 aa7.22□□□□□ -1.25
GTF2A1-203ENST00000553612 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.22□□□□□ -1.25
GTF2A1-203ENST00000553612 SPRY2O43597 315 aa7.22□□□□□ -1.25
GTF2A1-203ENST00000553612 TIRAPP58753 221 aa7.22□□□□□ -1.25
GTF2A1-203ENST00000553612 KLHL30-AS1Q8NEE0 82 aa7.22□□□□□ -1.25
GTF2A1-203ENST00000553612 TDRD15B5MCY1 1934 aaKnown RBP7.22□□□□□ -1.25
GTF2A1-203ENST00000553612 PPP1R17O96001 155 aa7.22□□□□□ -1.25
GTF2A1-203ENST00000553612 GHRHP01286 108 aa7.22□□□□□ -1.25
GTF2A1-203ENST00000553612 GDF5OSQ5U4N7 250 aa7.22□□□□□ -1.25
GTF2A1-203ENST00000553612 MRPL32Q9BYC8 188 aaKnown RBP7.22□□□□□ -1.25
GTF2A1-203ENST00000553612 PRDM6Q9NQX0 595 aa7.22□□□□□ -1.25
GTF2A1-203ENST00000553612 WIPF1O43516 503 aa7.21□□□□□ -1.25
GTF2A1-203ENST00000553612 LOXP28300 417 aaPredicted RBP7.21□□□□□ -1.25
GTF2A1-203ENST00000553612 EFNA4P52798 201 aa7.21□□□□□ -1.25
GTF2A1-203ENST00000553612 FMC1Q96HJ9 113 aa7.21□□□□□ -1.25
GTF2A1-203ENST00000553612 AGPAT4-IT1Q9H0P7 198 aa7.21□□□□□ -1.25
GTF2A1-203ENST00000553612 TANC2Q9HCD6 1990 aa7.21□□□□□ -1.25
GTF2A1-203ENST00000553612 A0A0B4J2C4 111 aa7.21□□□□□ -1.25
GTF2A1-203ENST00000553612 NCKAP5O14513 1909 aa7.21□□□□□ -1.25
GTF2A1-203ENST00000553612 IGKV3-20P01619 116 aa7.21□□□□□ -1.26
GTF2A1-203ENST00000553612 CRYGSP22914 178 aa7.21□□□□□ -1.26
GTF2A1-203ENST00000553612 LAGE3Q14657 143 aa7.21□□□□□ -1.26
GTF2A1-203ENST00000553612 TMEM14EPQ6UXP3 125 aa7.21□□□□□ -1.26
GTF2A1-203ENST00000553612 Q6ZT83 130 aa7.21□□□□□ -1.26
GTF2A1-203ENST00000553612 FAM90A1Q86YD7 464 aa7.21□□□□□ -1.26
GTF2A1-203ENST00000553612 TRAV26-2A0A0B4J265 109 aa7.21□□□□□ -1.26
GTF2A1-203ENST00000553612 DPH3Q96FX2 82 aa7.21□□□□□ -1.26
GTF2A1-203ENST00000553612 M0R1W7 72 aa7.21□□□□□ -1.26
GTF2A1-203ENST00000553612 ELANEP08246 267 aa7.21□□□□□ -1.26
GTF2A1-203ENST00000553612 Q6ZNB5 142 aa7.21□□□□□ -1.26
GTF2A1-203ENST00000553612 SLC25A29Q8N8R3 303 aa7.21□□□□□ -1.26
GTF2A1-203ENST00000553612 IGKV1-12A0A0C4DH73 117 aa7.2□□□□□ -1.26
GTF2A1-203ENST00000553612 IGKV1D-12P01611 117 aa7.2□□□□□ -1.26
GTF2A1-203ENST00000553612 LPAL2Q16609 132 aa7.2□□□□□ -1.26
GTF2A1-203ENST00000553612 RASL10AQ92737 203 aa7.2□□□□□ -1.26
GTF2A1-203ENST00000553612 SPANXDQ9BXN6 97 aa7.2□□□□□ -1.26
GTF2A1-203ENST00000553612 SNURFQ9Y675 71 aa7.2□□□□□ -1.26
GTF2A1-203ENST00000553612 PCNTO95613 3336 aa7.2□□□□□ -1.26
GTF2A1-203ENST00000553612 WISP1O95388 367 aa7.2□□□□□ -1.26
GTF2A1-203ENST00000553612 PF4P02776 101 aa7.2□□□□□ -1.26
GTF2A1-203ENST00000553612 ADARB2-AS1A8MUL3 147 aa7.2□□□□□ -1.26
GTF2A1-203ENST00000553612 FOLR3P41439 243 aa7.2□□□□□ -1.26
GTF2A1-203ENST00000553612 CEMP1Q6PRD7 247 aaPredicted RBP7.2□□□□□ -1.26
GTF2A1-203ENST00000553612 IGHV5-10-1A0A0J9YXX1 117 aa7.2□□□□□ -1.26
GTF2A1-203ENST00000553612 THBDP07204 575 aa7.2□□□□□ -1.26
GTF2A1-203ENST00000553612 TFF2Q03403 129 aa7.2□□□□□ -1.26
GTF2A1-203ENST00000553612 PRORYQ9H606 182 aa7.2□□□□□ -1.26
GTF2A1-203ENST00000553612 F6UB75 175 aa7.2□□□□□ -1.26
GTF2A1-203ENST00000553612 LINC01561Q8N1V8 128 aa7.2□□□□□ -1.26
GTF2A1-203ENST00000553612 PHLDA3Q9Y5J5 127 aa7.2□□□□□ -1.26
GTF2A1-203ENST00000553612 LRCOL1A6NCL2 159 aa7.19□□□□□ -1.26
GTF2A1-203ENST00000553612 LINC01548A6NM66 108 aa7.19□□□□□ -1.26
GTF2A1-203ENST00000553612 AHCTF1Q8WYP5 2266 aa7.19□□□□□ -1.26
GTF2A1-203ENST00000553612 ZGRF1Q86YA3 2104 aa7.19□□□□□ -1.26
GTF2A1-203ENST00000553612 IGKV1-27A0A075B6S5 117 aa7.19□□□□□ -1.26
GTF2A1-203ENST00000553612 E9PLN8 166 aa7.19□□□□□ -1.26
GTF2A1-203ENST00000553612 SLC25A48Q6ZT89 311 aaKnown RBP7.19□□□□□ -1.26
GTF2A1-203ENST00000553612 LY6G5BQ8NDX9 201 aa7.19□□□□□ -1.26
GTF2A1-203ENST00000553612 ZNF576Q9H609 170 aa7.19□□□□□ -1.26
GTF2A1-203ENST00000553612 HHLA3Q9XRX5 114 aa7.19□□□□□ -1.26
GTF2A1-203ENST00000553612 TRPM7Q96QT4 1865 aa7.19□□□□□ -1.26
GTF2A1-203ENST00000553612 FAM90A20PA6NIJ5 464 aa7.19□□□□□ -1.26
GTF2A1-203ENST00000553612 FKBP2P26885 142 aaKnown RBP7.19□□□□□ -1.26
GTF2A1-203ENST00000553612 UBE2E1P51965 193 aa7.19□□□□□ -1.26
GTF2A1-203ENST00000553612 TRGV9Q99603 122 aa7.19□□□□□ -1.26
GTF2A1-203ENST00000553612 MAPKAPK5-AS1Q8N8E1 139 aa7.19□□□□□ -1.26
GTF2A1-203ENST00000553612 Q8TAT8 98 aa7.19□□□□□ -1.26
GTF2A1-203ENST00000553612 ITGB4P16144 1822 aa7.19□□□□□ -1.26
GTF2A1-203ENST00000553612 FAM90A18PA6NE21 464 aa7.19□□□□□ -1.26
GTF2A1-203ENST00000553612 FAM90A16PA6NEW6 464 aa7.19□□□□□ -1.26
GTF2A1-203ENST00000553612 FAM90A9PA6NNJ1 464 aa7.19□□□□□ -1.26
GTF2A1-203ENST00000553612 Q6Q795 121 aa7.19□□□□□ -1.26
GTF2A1-203ENST00000553612 OTORQ9NRC9 128 aa7.19□□□□□ -1.26
GTF2A1-203ENST00000553612 IGKV2-40A0A087WW87 121 aaPredicted RBP7.18□□□□□ -1.26
GTF2A1-203ENST00000553612 IGKV2D-40P01614 121 aaPredicted RBP7.18□□□□□ -1.26
GTF2A1-203ENST00000553612 CSRP1P21291 193 aaKnown RBP7.18□□□□□ -1.26
GTF2A1-203ENST00000553612 SIPA1L3O60292 1781 aaPredicted RBP7.18□□□□□ -1.26
GTF2A1-203ENST00000553612 TRBV10-2A0A0K0K1G8 114 aa7.18□□□□□ -1.26
GTF2A1-203ENST00000553612 CELA2AP08217 269 aa7.18□□□□□ -1.26
GTF2A1-203ENST00000553612 FHL3Q13643 280 aa7.18□□□□□ -1.26
GTF2A1-203ENST00000553612 FHL5Q5TD97 284 aa7.18□□□□□ -1.26
GTF2A1-203ENST00000553612 HIST2H2BCQ6DN03 193 aa7.18□□□□□ -1.26
GTF2A1-203ENST00000553612 HIST2H2BDQ6DRA6 164 aa7.18□□□□□ -1.26
GTF2A1-203ENST00000553612 AKAP6Q13023 2319 aa7.18□□□□□ -1.26
GTF2A1-203ENST00000553612 LGALS9O00182 355 aa7.18□□□□□ -1.26
GTF2A1-203ENST00000553612 TNFAIP6P98066 277 aaPredicted RBP7.18□□□□□ -1.26
GTF2A1-203ENST00000553612 HS3ST6Q96QI5 342 aa7.18□□□□□ -1.26
GTF2A1-203ENST00000553612 DENND4CQ5VZ89 1909 aa7.18□□□□□ -1.26
GTF2A1-203ENST00000553612 OVOL1O14753 267 aa7.18□□□□□ -1.26
GTF2A1-203ENST00000553612 IGHG2P01859 326 aa7.18□□□□□ -1.26
GTF2A1-203ENST00000553612 ZNF22P17026 224 aaPredicted RBP7.18□□□□□ -1.26
GTF2A1-203ENST00000553612 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.18□□□□□ -1.26
GTF2A1-203ENST00000553612 DLL1O00548 723 aa7.18□□□□□ -1.26
GTF2A1-203ENST00000553612 RPL27AP46776 148 aaKnown RBP7.18□□□□□ -1.26
GTF2A1-203ENST00000553612 FAM201AQ5SY85 155 aa7.18□□□□□ -1.26
GTF2A1-203ENST00000553612 VWCEQ96DN2 955 aa7.18□□□□□ -1.26
GTF2A1-203ENST00000553612 RP1L1Q8IWN7 2480 aaPredicted RBP7.18□□□□□ -1.26
GTF2A1-203ENST00000553612 H3BT86 120 aa7.17□□□□□ -1.26
GTF2A1-203ENST00000553612 GUSBP11Q6P575 273 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 176.4 ms