RNA–Protein interactions for RNA: ENST00000553474.5

SHMT2-205, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-205ENST00000553474 ZNF705AQ6ZN79 300 aaPredicted RBP10.11□□□□□ -0.79
SHMT2-205ENST00000553474 Q8N9W7 124 aa10.11□□□□□ -0.79
SHMT2-205ENST00000553474 FAM110DQ8TAY7 271 aaPredicted RBP10.11□□□□□ -0.79
SHMT2-205ENST00000553474 ZC2HC1AQ96GY0 325 aa10.11□□□□□ -0.79
SHMT2-205ENST00000553474 RABAC1Q9UI14 185 aa10.11□□□□□ -0.79
SHMT2-205ENST00000553474 SH2D7A6NKC9 451 aaPredicted RBP10.1□□□□□ -0.79
SHMT2-205ENST00000553474 HSBP1L1C9JCN9 74 aa10.1□□□□□ -0.79
SHMT2-205ENST00000553474 CRXO43186 299 aaPredicted RBP10.1□□□□□ -0.79
SHMT2-205ENST00000553474 TDRG1Q3Y452 100 aa10.1□□□□□ -0.79
SHMT2-205ENST00000553474 KLF17Q5JT82 389 aaPredicted RBP10.1□□□□□ -0.79
SHMT2-205ENST00000553474 RNASEKQ6P5S7 137 aaKnown RBP10.1□□□□□ -0.79
SHMT2-205ENST00000553474 DYNAPQ8N1N2 210 aa10.1□□□□□ -0.79
SHMT2-205ENST00000553474 FAM19A2Q8N3H0 131 aa10.1□□□□□ -0.79
SHMT2-205ENST00000553474 ATP6V0BQ99437 205 aa10.1□□□□□ -0.79
SHMT2-205ENST00000553474 UQCR10Q9UDW1 63 aa10.1□□□□□ -0.79
SHMT2-205ENST00000553474 EREGO14944 169 aa10.09□□□□□ -0.79
SHMT2-205ENST00000553474 GOSR1O95249 250 aa10.09□□□□□ -0.79
SHMT2-205ENST00000553474 CTSGP08311 255 aa10.09□□□□□ -0.79
SHMT2-205ENST00000553474 C17orf77Q96MU5 243 aa10.09□□□□□ -0.79
SHMT2-205ENST00000553474 RNF114Q9Y508 228 aa10.09□□□□□ -0.79
SHMT2-205ENST00000553474 ABCA12Q86UK0 2595 aa10.09□□□□□ -0.79
SHMT2-205ENST00000553474 TACC2O95359 2948 aa10.09□□□□□ -0.79
SHMT2-205ENST00000553474 NDUFS8O00217 210 aa10.09□□□□□ -0.79
SHMT2-205ENST00000553474 EGR2P11161 476 aaPredicted RBP10.09□□□□□ -0.79
SHMT2-205ENST00000553474 SPATA45Q537H7 98 aa10.09□□□□□ -0.79
SHMT2-205ENST00000553474 TMEM70Q9BUB7 260 aa10.09□□□□□ -0.79
SHMT2-205ENST00000553474 A0A1W2PRD5 423 aa10.08□□□□□ -0.8
SHMT2-205ENST00000553474 A0A1W2PRF3 423 aa10.08□□□□□ -0.8
SHMT2-205ENST00000553474 A0A1W2PRM7 423 aa10.08□□□□□ -0.8
SHMT2-205ENST00000553474 C2orf70A6NJV1 201 aa10.08□□□□□ -0.8
SHMT2-205ENST00000553474 LINC00614P0C842 121 aa10.08□□□□□ -0.8
SHMT2-205ENST00000553474 RPS20P60866 119 aaKnown RBP10.08□□□□□ -0.8
SHMT2-205ENST00000553474 SRSF2Q01130 221 aaKnown RBP10.08□□□□□ -0.8
SHMT2-205ENST00000553474 ZNF493Q6ZR52 646 aa10.08□□□□□ -0.8
SHMT2-205ENST00000553474 WNK2Q9Y3S1 2297 aa10.08□□□□□ -0.8
SHMT2-205ENST00000553474 ZNF785A8K8V0 405 aa10.07□□□□□ -0.8
SHMT2-205ENST00000553474 OVOL3O00110 214 aa10.07□□□□□ -0.8
SHMT2-205ENST00000553474 LMO4P61968 165 aa10.07□□□□□ -0.8
SHMT2-205ENST00000553474 FBLN7Q53RD9 439 aa10.07□□□□□ -0.8
SHMT2-205ENST00000553474 ZNF502Q8TBZ5 544 aa10.07□□□□□ -0.8
SHMT2-205ENST00000553474 BAHCC1Q9P281 2608 aa10.07□□□□□ -0.8
SHMT2-205ENST00000553474 A0A087X0K7 114 aa10.06□□□□□ -0.8
SHMT2-205ENST00000553474 OR2T8A6NH00 312 aa10.06□□□□□ -0.8
SHMT2-205ENST00000553474 IGLC3P0DOY3 106 aa10.06□□□□□ -0.8
SHMT2-205ENST00000553474 BMI1P35226 326 aa10.06□□□□□ -0.8
SHMT2-205ENST00000553474 URB1-AS1Q96HZ7 61 aa10.06□□□□□ -0.8
SHMT2-205ENST00000553474 AJUBAQ96IF1 538 aa10.06□□□□□ -0.8
SHMT2-205ENST00000553474 CELSR2Q9HCU4 2923 aa10.06□□□□□ -0.8
SHMT2-205ENST00000553474 SPG11Q96JI7 2443 aa10.06□□□□□ -0.8
SHMT2-205ENST00000553474 TRAV9-2A0A087WT02 112 aa10.06□□□□□ -0.8
SHMT2-205ENST00000553474 RBAKDNA6NC62 111 aa10.06□□□□□ -0.8
SHMT2-205ENST00000553474 M0R3E3 92 aa10.06□□□□□ -0.8
SHMT2-205ENST00000553474 SAA4P35542 130 aa10.06□□□□□ -0.8
SHMT2-205ENST00000553474 CRIP1P50238 77 aa10.06□□□□□ -0.8
SHMT2-205ENST00000553474 EBLN2Q6P2I7 272 aa10.06□□□□□ -0.8
SHMT2-205ENST00000553474 NRGNQ92686 78 aa10.06□□□□□ -0.8
SHMT2-205ENST00000553474 TMUB1Q9BVT8 246 aa10.06□□□□□ -0.8
SHMT2-205ENST00000553474 TRBV7-1A0A0A6YYK4 115 aa10.05□□□□□ -0.8
SHMT2-205ENST00000553474 IGHV1-24A0A0C4DH33 117 aa10.05□□□□□ -0.8
SHMT2-205ENST00000553474 LEPROTL1O95214 131 aa10.05□□□□□ -0.8
SHMT2-205ENST00000553474 RPLP1P05386 114 aaKnown RBP10.05□□□□□ -0.8
SHMT2-205ENST00000553474 ARMS2P0C7Q2 107 aa10.05□□□□□ -0.8
SHMT2-205ENST00000553474 UNQ5815/PRO19632Q6UWF5 114 aa10.05□□□□□ -0.8
SHMT2-205ENST00000553474 PRR25Q96S07 402 aa10.05□□□□□ -0.8
SHMT2-205ENST00000553474 SLC50A1Q9BRV3 221 aa10.05□□□□□ -0.8
SHMT2-205ENST00000553474 ANKRD17O75179 2603 aaKnown RBP10.05□□□□□ -0.8
SHMT2-205ENST00000553474 POLQO75417 2590 aa10.05□□□□□ -0.8
SHMT2-205ENST00000553474 TMEM189A5PLL7 270 aa10.04□□□□□ -0.8
SHMT2-205ENST00000553474 NPFFO15130 113 aa10.04□□□□□ -0.8
SHMT2-205ENST00000553474 C15orf32Q32M92 178 aa10.04□□□□□ -0.8
SHMT2-205ENST00000553474 BPESC1Q9GZL8 116 aa10.04□□□□□ -0.8
SHMT2-205ENST00000553474 HSPB8Q9UJY1 196 aa10.04□□□□□ -0.8
SHMT2-205ENST00000553474 S4R3C0 116 aa10.04□□□□□ -0.8
SHMT2-205ENST00000553474 UNC79Q9P2D8 2635 aa10.04□□□□□ -0.8
SHMT2-205ENST00000553474 CENPVL3A0A0U1RRI6 287 aa10.03□□□□□ -0.8
SHMT2-205ENST00000553474 TCAPO15273 167 aa10.03□□□□□ -0.8
SHMT2-205ENST00000553474 NDUFS7O75251 213 aa10.03□□□□□ -0.8
SHMT2-205ENST00000553474 KRTAP10-9P60411 292 aa10.03□□□□□ -0.8
SHMT2-205ENST00000553474 FAM120AOSQ5T036 256 aa10.03□□□□□ -0.8
SHMT2-205ENST00000553474 EEF1AKMT3Q96AZ1 226 aa10.03□□□□□ -0.8
SHMT2-205ENST00000553474 CCL19Q99731 98 aa10.03□□□□□ -0.8
SHMT2-205ENST00000553474 CLEC5AQ9NY25 188 aa10.03□□□□□ -0.8
SHMT2-205ENST00000553474 ATP6V0E1O15342 81 aa10.03□□□□□ -0.8
SHMT2-205ENST00000553474 BUB3O43684 328 aa10.03□□□□□ -0.8
SHMT2-205ENST00000553474 CRIP2P52943 208 aaPredicted RBP10.03□□□□□ -0.8
SHMT2-205ENST00000553474 RHOGP84095 191 aa10.03□□□□□ -0.8
SHMT2-205ENST00000553474 PET117Q6UWS5 81 aa10.03□□□□□ -0.8
SHMT2-205ENST00000553474 BCL6BQ8N143 479 aaPredicted RBP10.03□□□□□ -0.8
SHMT2-205ENST00000553474 MRPL53Q96EL3 112 aaKnown RBP10.03□□□□□ -0.8
SHMT2-205ENST00000553474 ZFAND3Q9H8U3 227 aa10.03□□□□□ -0.8
SHMT2-205ENST00000553474 MRPS16Q9Y3D3 137 aaKnown RBP10.03□□□□□ -0.8
SHMT2-205ENST00000553474 FBN2P35556 2912 aa10.02□□□□□ -0.8
SHMT2-205ENST00000553474 SYS1-DBNDD2H3BUS1 97 aa10.02□□□□□ -0.81
SHMT2-205ENST00000553474 SH2D1AO60880 128 aa10.02□□□□□ -0.81
SHMT2-205ENST00000553474 COL5A1-AS1Q5SY13 56 aa10.02□□□□□ -0.81
SHMT2-205ENST00000553474 MAP1LC3CQ9BXW4 147 aa10.02□□□□□ -0.81
SHMT2-205ENST00000553474 TMEM191AQ9H0A3 160 aa10.02□□□□□ -0.81
SHMT2-205ENST00000553474 ST20Q9HBF5 79 aa10.02□□□□□ -0.81
SHMT2-205ENST00000553474 AP5S1Q9NUS5 200 aa10.02□□□□□ -0.81
SHMT2-205ENST00000553474 NBPF19A0A087WUL8 3843 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 226.3 ms