RNA–Protein interactions for RNA: ENST00000553039.1

CKAP4-203, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 4

Gene CKAP4, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-203ENST00000553039 C9orf170A2RU37 121 aa3.49□□□□□ -1.85
CKAP4-203ENST00000553039 PCP4L1A6NKN8 68 aa3.49□□□□□ -1.85
CKAP4-203ENST00000553039 UPK2O00526 184 aa3.49□□□□□ -1.85
CKAP4-203ENST00000553039 GOSR2O14653 212 aa3.49□□□□□ -1.85
CKAP4-203ENST00000553039 PSCAO43653 123 aa3.49□□□□□ -1.85
CKAP4-203ENST00000553039 PPYP01298 95 aa3.49□□□□□ -1.85
CKAP4-203ENST00000553039 GIPP09681 153 aaPredicted RBP3.49□□□□□ -1.85
CKAP4-203ENST00000553039 DNAH10OSP0CZ25 163 aa3.49□□□□□ -1.85
CKAP4-203ENST00000553039 S100GP29377 79 aa3.49□□□□□ -1.85
CKAP4-203ENST00000553039 ID1P41134 155 aa3.49□□□□□ -1.85
CKAP4-203ENST00000553039 P2RY1P47900 373 aa3.49□□□□□ -1.85
CKAP4-203ENST00000553039 FXYD7P58549 80 aa3.49□□□□□ -1.85
CKAP4-203ENST00000553039 FXYD4P59646 89 aa3.49□□□□□ -1.85
CKAP4-203ENST00000553039 CD300CQ08708 224 aa3.49□□□□□ -1.85
CKAP4-203ENST00000553039 PPP1R1AQ13522 171 aa3.49□□□□□ -1.85
CKAP4-203ENST00000553039 TDRG1Q3Y452 100 aa3.49□□□□□ -1.85
CKAP4-203ENST00000553039 ZNF600Q6ZNG1 722 aa3.49□□□□□ -1.85
CKAP4-203ENST00000553039 C12orf45Q8N5I9 185 aaPredicted RBP3.49□□□□□ -1.85
CKAP4-203ENST00000553039 CCDC71LQ8N9Z2 235 aa3.49□□□□□ -1.85
CKAP4-203ENST00000553039 OR4B1Q8NGF8 309 aa3.49□□□□□ -1.85
CKAP4-203ENST00000553039 OR1L8Q8NGR8 309 aa3.49□□□□□ -1.85
CKAP4-203ENST00000553039 COQ8AQ8NI60 647 aa3.49□□□□□ -1.85
CKAP4-203ENST00000553039 ZNF486Q96H40 463 aaPredicted RBP3.49□□□□□ -1.85
CKAP4-203ENST00000553039 TMEM56Q96MV1 263 aa3.49□□□□□ -1.85
CKAP4-203ENST00000553039 CABLES2Q9BTV7 478 aa3.49□□□□□ -1.85
CKAP4-203ENST00000553039 FXYD6Q9H0Q3 95 aa3.49□□□□□ -1.85
CKAP4-203ENST00000553039 TNFRSF18Q9Y5U5 241 aa3.49□□□□□ -1.85
CKAP4-203ENST00000553039 RNF213Q63HN8 5207 aa3.49□□□□□ -1.85
CKAP4-203ENST00000553039 A0A0B4J2A0 478 aa3.48□□□□□ -1.85
CKAP4-203ENST00000553039 PIGBOS1A0A0B4J2F0 54 aa3.48□□□□□ -1.85
CKAP4-203ENST00000553039 TEX50A0A1B0GTY4 177 aa3.48□□□□□ -1.85
CKAP4-203ENST00000553039 FBLL1A6NHQ2 334 aaKnown RBP3.48□□□□□ -1.85
CKAP4-203ENST00000553039 CRYM-AS1A6NIL9 109 aa3.48□□□□□ -1.85
CKAP4-203ENST00000553039 K7EIM0 57 aa3.48□□□□□ -1.85
CKAP4-203ENST00000553039 SFT2D2O95562 160 aa3.48□□□□□ -1.85
CKAP4-203ENST00000553039 IGKV3-20P01619 116 aa3.48□□□□□ -1.85
CKAP4-203ENST00000553039 CXCL3P19876 107 aa3.48□□□□□ -1.85
CKAP4-203ENST00000553039 EVI2AP22794 236 aa3.48□□□□□ -1.85
CKAP4-203ENST00000553039 NFYAP23511 347 aaPredicted RBP3.48□□□□□ -1.85
CKAP4-203ENST00000553039 CRYBB3P26998 211 aa3.48□□□□□ -1.85
CKAP4-203ENST00000553039 TSPOP30536 169 aa3.48□□□□□ -1.85
CKAP4-203ENST00000553039 PIGPP57054 158 aa3.48□□□□□ -1.85
CKAP4-203ENST00000553039 SRPXP78539 464 aa3.48□□□□□ -1.85
CKAP4-203ENST00000553039 DHODHQ02127 395 aa3.48□□□□□ -1.85
CKAP4-203ENST00000553039 TWIST1Q15672 202 aa3.48□□□□□ -1.85
CKAP4-203ENST00000553039 LRRC37A5PQ49AS3 106 aa3.48□□□□□ -1.85
CKAP4-203ENST00000553039 MORN5Q5VZ52 161 aa3.48□□□□□ -1.85
CKAP4-203ENST00000553039 EBLN2Q6P2I7 272 aa3.48□□□□□ -1.85
CKAP4-203ENST00000553039 Q6ZRU5 148 aa3.48□□□□□ -1.85
CKAP4-203ENST00000553039 H1FOOQ8IZA3 346 aaPredicted RBP3.48□□□□□ -1.85
CKAP4-203ENST00000553039 C1orf158Q8N1D5 194 aa3.48□□□□□ -1.85
CKAP4-203ENST00000553039 OR10W1Q8NGF6 305 aa3.48□□□□□ -1.85
CKAP4-203ENST00000553039 OR1P1Q8NH06 330 aa3.48□□□□□ -1.85
CKAP4-203ENST00000553039 MITD1Q8WV92 249 aa3.48□□□□□ -1.85
CKAP4-203ENST00000553039 TCTEX1D2Q8WW35 142 aa3.48□□□□□ -1.85
CKAP4-203ENST00000553039 LSM10Q969L4 123 aaKnown RBP3.48□□□□□ -1.85
CKAP4-203ENST00000553039 TMEM230Q96A57 120 aa3.48□□□□□ -1.85
CKAP4-203ENST00000553039 HYLS1Q96M11 299 aa3.48□□□□□ -1.85
CKAP4-203ENST00000553039 RTBDNQ9BSG5 229 aaPredicted RBP3.48□□□□□ -1.85
CKAP4-203ENST00000553039 PDCD10Q9BUL8 212 aa3.48□□□□□ -1.85
CKAP4-203ENST00000553039 HINT2Q9BX68 163 aa3.48□□□□□ -1.85
CKAP4-203ENST00000553039 FKBP11Q9NYL4 201 aa3.48□□□□□ -1.85
CKAP4-203ENST00000553039 SHPKQ9UHJ6 478 aa3.48□□□□□ -1.85
CKAP4-203ENST00000553039 KCNIP3Q9Y2W7 256 aa3.48□□□□□ -1.85
CKAP4-203ENST00000553039 TIMM8BQ9Y5J9 83 aaPredicted RBP3.48□□□□□ -1.85
CKAP4-203ENST00000553039 IGLV9-49A0A0B4J1Y8 123 aa3.47□□□□□ -1.85
CKAP4-203ENST00000553039 TRAV5A0A0B4J249 113 aa3.47□□□□□ -1.85
CKAP4-203ENST00000553039 A0A0J9YY99 117 aa3.47□□□□□ -1.85
CKAP4-203ENST00000553039 GPR31O00270 319 aa3.47□□□□□ -1.85
CKAP4-203ENST00000553039 SNAPC5O75971 98 aa3.47□□□□□ -1.85
CKAP4-203ENST00000553039 HPRT1P00492 218 aa3.47□□□□□ -1.85
CKAP4-203ENST00000553039 NQO2P16083 231 aa3.47□□□□□ -1.85
CKAP4-203ENST00000553039 FHITP49789 147 aa3.47□□□□□ -1.85
CKAP4-203ENST00000553039 H2BFSP57053 126 aa3.47□□□□□ -1.85
CKAP4-203ENST00000553039 RND3P61587 244 aa3.47□□□□□ -1.85
CKAP4-203ENST00000553039 SUPT4H1P63272 117 aaKnown RBP3.47□□□□□ -1.85
CKAP4-203ENST00000553039 CYCSP99999 105 aaKnown RBP3.47□□□□□ -1.85
CKAP4-203ENST00000553039 WT1-ASQ06250 92 aa3.47□□□□□ -1.85
CKAP4-203ENST00000553039 FGL1Q08830 312 aa3.47□□□□□ -1.85
CKAP4-203ENST00000553039 OR2B11Q5JQS5 317 aa3.47□□□□□ -1.85
CKAP4-203ENST00000553039 FOXI2Q6ZQN5 318 aa3.47□□□□□ -1.85
CKAP4-203ENST00000553039 HSD17B11Q8NBQ5 300 aa3.47□□□□□ -1.85
CKAP4-203ENST00000553039 DMBX1Q8NFW5 382 aa3.47□□□□□ -1.85
CKAP4-203ENST00000553039 OR2T35Q8NGX2 323 aa3.47□□□□□ -1.85
CKAP4-203ENST00000553039 SECTM1Q8WVN6 248 aa3.47□□□□□ -1.85
CKAP4-203ENST00000553039 NAA60Q9H7X0 242 aa3.47□□□□□ -1.85
CKAP4-203ENST00000553039 NRN1Q9NPD7 142 aa3.47□□□□□ -1.85
CKAP4-203ENST00000553039 NDUFA4L2Q9NRX3 87 aa3.47□□□□□ -1.85
CKAP4-203ENST00000553039 COMMD9Q9P000 198 aa3.47□□□□□ -1.85
CKAP4-203ENST00000553039 LY96Q9Y6Y9 160 aa3.47□□□□□ -1.85
CKAP4-203ENST00000553039 IGLV5-45A0A087WSX0 123 aa3.46□□□□□ -1.86
CKAP4-203ENST00000553039 A0A087WZ39 114 aa3.46□□□□□ -1.86
CKAP4-203ENST00000553039 IGKV1D-13A0A0B4J2D9 117 aa3.46□□□□□ -1.86
CKAP4-203ENST00000553039 C3orf85A0A1B0GTC6 90 aa3.46□□□□□ -1.86
CKAP4-203ENST00000553039 ZNF705GA8MUZ8 300 aaPredicted RBP3.46□□□□□ -1.86
CKAP4-203ENST00000553039 SMLR1H3BR10 107 aa3.46□□□□□ -1.86
CKAP4-203ENST00000553039 I3L2K1 104 aa3.46□□□□□ -1.86
CKAP4-203ENST00000553039 RBFOX2O43251 390 aaKnown RBP eCLIP3.46□□□□□ -1.86
CKAP4-203ENST00000553039 NXPH4O95158 308 aa3.46□□□□□ -1.86
CKAP4-203ENST00000553039 TMEM50AO95807 157 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms