RNA–Protein interactions for RNA: ENST00000551320.1

PRPF40B-214, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-214ENST00000551320 LRRC20Q8TCA0 184 aa4.71□□□□□ -1.66
PRPF40B-214ENST00000551320 DYNC2LI1Q8TCX1 351 aa4.71□□□□□ -1.66
PRPF40B-214ENST00000551320 RPUSD4Q96CM3 377 aaKnown RBP4.71□□□□□ -1.66
PRPF40B-214ENST00000551320 GNPNAT1Q96EK6 184 aaPredicted RBP4.71□□□□□ -1.66
PRPF40B-214ENST00000551320 SOSTQ9BQB4 213 aa4.71□□□□□ -1.66
PRPF40B-214ENST00000551320 SHANK2-AS3Q9BTD1 123 aa4.71□□□□□ -1.66
PRPF40B-214ENST00000551320 SCP2D1Q9UJQ7 156 aa4.71□□□□□ -1.66
PRPF40B-214ENST00000551320 HIGD1AQ9Y241 93 aa4.71□□□□□ -1.66
PRPF40B-214ENST00000551320 TEX48A0A1B0GUV7 120 aa4.7□□□□□ -1.66
PRPF40B-214ENST00000551320 FABP12A6NFH5 140 aa4.7□□□□□ -1.66
PRPF40B-214ENST00000551320 H3BQ15 152 aa4.7□□□□□ -1.66
PRPF40B-214ENST00000551320 MRPS12O15235 138 aaKnown RBP4.7□□□□□ -1.66
PRPF40B-214ENST00000551320 TRIAP1O43715 76 aa4.7□□□□□ -1.66
PRPF40B-214ENST00000551320 HYPMO75409 117 aa4.7□□□□□ -1.66
PRPF40B-214ENST00000551320 DUSP14O95147 198 aaKnown RBP4.7□□□□□ -1.66
PRPF40B-214ENST00000551320 CT45A10P0DMU9 189 aa4.7□□□□□ -1.66
PRPF40B-214ENST00000551320 LINC00315P59091 139 aa4.7□□□□□ -1.66
PRPF40B-214ENST00000551320 GFI1BQ5VTD9 330 aa4.7□□□□□ -1.66
PRPF40B-214ENST00000551320 SPATA31B1PQ5VZV4 182 aa4.7□□□□□ -1.66
PRPF40B-214ENST00000551320 TMEM144Q7Z5S9 345 aa4.7□□□□□ -1.66
PRPF40B-214ENST00000551320 GPR141Q7Z602 305 aa4.7□□□□□ -1.66
PRPF40B-214ENST00000551320 MCFD2Q8NI22 146 aa4.7□□□□□ -1.66
PRPF40B-214ENST00000551320 RNASE8Q8TDE3 154 aaKnown RBP4.7□□□□□ -1.66
PRPF40B-214ENST00000551320 TRIM63Q969Q1 353 aa4.7□□□□□ -1.66
PRPF40B-214ENST00000551320 VSIG2Q96IQ7 327 aa4.7□□□□□ -1.66
PRPF40B-214ENST00000551320 SLIRPQ9GZT3 109 aaKnown RBP4.7□□□□□ -1.66
PRPF40B-214ENST00000551320 PSENENQ9NZ42 101 aa4.7□□□□□ -1.66
PRPF40B-214ENST00000551320 RABL2BQ9UNT1 228 aa4.7□□□□□ -1.66
PRPF40B-214ENST00000551320 TIMM8BQ9Y5J9 83 aaPredicted RBP4.7□□□□□ -1.66
PRPF40B-214ENST00000551320 CCSO14618 274 aa4.69□□□□□ -1.66
PRPF40B-214ENST00000551320 CTDSPLO15194 276 aa4.69□□□□□ -1.66
PRPF40B-214ENST00000551320 SFT2D2O95562 160 aa4.69□□□□□ -1.66
PRPF40B-214ENST00000551320 FABP1P07148 127 aa4.69□□□□□ -1.66
PRPF40B-214ENST00000551320 NUP62P37198 522 aaPredicted RBP4.69□□□□□ -1.66
PRPF40B-214ENST00000551320 MEOX2P50222 304 aa4.69□□□□□ -1.66
PRPF40B-214ENST00000551320 XGP55808 180 aa4.69□□□□□ -1.66
PRPF40B-214ENST00000551320 TAS2R60P59551 318 aa4.69□□□□□ -1.66
PRPF40B-214ENST00000551320 KRTAP10-1P60331 282 aa4.69□□□□□ -1.66
PRPF40B-214ENST00000551320 MRPS10P82664 201 aaKnown RBP4.69□□□□□ -1.66
PRPF40B-214ENST00000551320 SSBP1Q04837 148 aaKnown RBP4.69□□□□□ -1.66
PRPF40B-214ENST00000551320 GSN-AS1Q9NRJ2 163 aa4.69□□□□□ -1.66
PRPF40B-214ENST00000551320 TP53TG3Q9ULZ0 132 aa4.69□□□□□ -1.66
PRPF40B-214ENST00000551320 STRAPQ9Y3F4 350 aaKnown RBP4.69□□□□□ -1.66
PRPF40B-214ENST00000551320 KLF12Q9Y4X4 402 aa4.69□□□□□ -1.66
PRPF40B-214ENST00000551320 H3BMQ9 156 aa4.68□□□□□ -1.66
PRPF40B-214ENST00000551320 M0R3E3 92 aa4.68□□□□□ -1.66
PRPF40B-214ENST00000551320 ANXA3P12429 323 aa4.68□□□□□ -1.66
PRPF40B-214ENST00000551320 M6PRP20645 277 aa4.68□□□□□ -1.66
PRPF40B-214ENST00000551320 TSPOP30536 169 aa4.68□□□□□ -1.66
PRPF40B-214ENST00000551320 CDKN1BP46527 198 aa4.68□□□□□ -1.66
PRPF40B-214ENST00000551320 CD300CQ08708 224 aa4.68□□□□□ -1.66
PRPF40B-214ENST00000551320 BTN1A1Q13410 526 aa4.68□□□□□ -1.66
PRPF40B-214ENST00000551320 OPCMLQ14982 345 aa4.68□□□□□ -1.66
PRPF40B-214ENST00000551320 TMEM128Q5BJH2 165 aa4.68□□□□□ -1.66
PRPF40B-214ENST00000551320 Q6ZRN7 208 aaPredicted RBP4.68□□□□□ -1.66
PRPF40B-214ENST00000551320 LINC00305Q7Z4B0 112 aa4.68□□□□□ -1.66
PRPF40B-214ENST00000551320 OR4D5Q8NGN0 318 aa4.68□□□□□ -1.66
PRPF40B-214ENST00000551320 RXFP4Q8TDU9 374 aa4.68□□□□□ -1.66
PRPF40B-214ENST00000551320 RAB2BQ8WUD1 216 aa4.68□□□□□ -1.66
PRPF40B-214ENST00000551320 C15orf40Q8WUR7 153 aa4.68□□□□□ -1.66
PRPF40B-214ENST00000551320 TMEM37Q8WXS4 190 aa4.68□□□□□ -1.66
PRPF40B-214ENST00000551320 C16orf74Q96GX8 76 aa4.68□□□□□ -1.66
PRPF40B-214ENST00000551320 MRPS26Q9BYN8 205 aaKnown RBP4.68□□□□□ -1.66
PRPF40B-214ENST00000551320 ARV1Q9H2C2 271 aa4.68□□□□□ -1.66
PRPF40B-214ENST00000551320 Q9H3A6 140 aa4.68□□□□□ -1.66
PRPF40B-214ENST00000551320 CCDC59Q9P031 241 aaKnown RBP4.68□□□□□ -1.66
PRPF40B-214ENST00000551320 GSKIPQ9P0R6 139 aa4.68□□□□□ -1.66
PRPF40B-214ENST00000551320 V9GYH0 126 aa4.68□□□□□ -1.66
PRPF40B-214ENST00000551320 TRGV1A0A0A0MS02 117 aa4.67□□□□□ -1.66
PRPF40B-214ENST00000551320 C9orf170A2RU37 121 aa4.67□□□□□ -1.66
PRPF40B-214ENST00000551320 EPM2AB3EWF7 344 aa4.67□□□□□ -1.66
PRPF40B-214ENST00000551320 AGPAT2O15120 278 aa4.67□□□□□ -1.66
PRPF40B-214ENST00000551320 MED6O75586 246 aa4.67□□□□□ -1.66
PRPF40B-214ENST00000551320 EIF3GO75821 320 aaKnown RBP eCLIP4.67□□□□□ -1.66
PRPF40B-214ENST00000551320 INAFM2P0DMQ5 153 aa4.67□□□□□ -1.66
PRPF40B-214ENST00000551320 RPL7P18124 248 aaKnown RBP4.67□□□□□ -1.66
PRPF40B-214ENST00000551320 RNASE4P34096 147 aaKnown RBP4.67□□□□□ -1.66
PRPF40B-214ENST00000551320 FAM3BP58499 235 aaPredicted RBP4.67□□□□□ -1.66
PRPF40B-214ENST00000551320 PRR9Q5T870 116 aa4.67□□□□□ -1.66
PRPF40B-214ENST00000551320 MIC13Q5XKP0 118 aa4.67□□□□□ -1.66
PRPF40B-214ENST00000551320 TOMM5Q8N4H5 51 aa4.67□□□□□ -1.66
PRPF40B-214ENST00000551320 ZNF431Q8TF32 576 aaPredicted RBP4.67□□□□□ -1.66
PRPF40B-214ENST00000551320 TMEM263Q8WUH6 116 aaKnown RBP4.67□□□□□ -1.66
PRPF40B-214ENST00000551320 SCGB3A2Q96PL1 93 aa4.67□□□□□ -1.66
PRPF40B-214ENST00000551320 MGST2Q99735 147 aa4.67□□□□□ -1.66
PRPF40B-214ENST00000551320 ZNF331Q9NQX6 463 aaPredicted RBP4.67□□□□□ -1.66
PRPF40B-214ENST00000551320 MRPL16Q9NX20 251 aaKnown RBP4.67□□□□□ -1.66
PRPF40B-214ENST00000551320 RSL24D1Q9UHA3 163 aaKnown RBP4.67□□□□□ -1.66
PRPF40B-214ENST00000551320 IGKV2-40A0A087WW87 121 aaPredicted RBP4.66□□□□□ -1.66
PRPF40B-214ENST00000551320 A0A087X0K7 114 aa4.66□□□□□ -1.66
PRPF40B-214ENST00000551320 COX7A2P2O60397 106 aa4.66□□□□□ -1.66
PRPF40B-214ENST00000551320 CST7O76096 145 aa4.66□□□□□ -1.66
PRPF40B-214ENST00000551320 NXPH4O95158 308 aa4.66□□□□□ -1.66
PRPF40B-214ENST00000551320 IGKV2D-40P01614 121 aaPredicted RBP4.66□□□□□ -1.66
PRPF40B-214ENST00000551320 RLN2P04090 185 aa4.66□□□□□ -1.66
PRPF40B-214ENST00000551320 SFTA3P0C7M3 94 aa4.66□□□□□ -1.66
PRPF40B-214ENST00000551320 PYYP10082 97 aa4.66□□□□□ -1.66
PRPF40B-214ENST00000551320 BTF3P20290 206 aaKnown RBP4.66□□□□□ -1.66
PRPF40B-214ENST00000551320 SRPXP78539 464 aa4.66□□□□□ -1.66
PRPF40B-214ENST00000551320 BAK1Q16611 211 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms