RNA–Protein interactions for RNA: ENST00000550841.1

NEK3-202, Transcript of NIMA related kinase 3, humanhuman

TSL 4

Gene NEK3, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-202ENST00000550841 CSTL1Q9H114 145 aa15.82■□□□□ 0.12
NEK3-202ENST00000550841 PLA2G2EQ9NZK7 142 aa15.82■□□□□ 0.12
NEK3-202ENST00000550841 A0A0J9YX75 114 aa15.81■□□□□ 0.12
NEK3-202ENST00000550841 RANP62826 216 aaKnown RBP15.81■□□□□ 0.12
NEK3-202ENST00000550841 MORN3Q6PF18 240 aaPredicted RBP15.81■□□□□ 0.12
NEK3-202ENST00000550841 TRPT1Q86TN4 253 aaKnown RBP15.81■□□□□ 0.12
NEK3-202ENST00000550841 SUN5Q8TC36 379 aa15.81■□□□□ 0.12
NEK3-202ENST00000550841 MAP1LC3B2A6NCE7 125 aa15.8■□□□□ 0.12
NEK3-202ENST00000550841 CSN1S1P47710 185 aa15.8■□□□□ 0.12
NEK3-202ENST00000550841 SULT1A2P50226 295 aa15.8■□□□□ 0.12
NEK3-202ENST00000550841 ICAM4Q14773 271 aa15.8■□□□□ 0.12
NEK3-202ENST00000550841 SSX7Q7RTT5 188 aa15.8■□□□□ 0.12
NEK3-202ENST00000550841 SBSPONQ8IVN8 264 aa15.8■□□□□ 0.12
NEK3-202ENST00000550841 IQCF2Q8IXL9 164 aa15.8■□□□□ 0.12
NEK3-202ENST00000550841 MBD3L1Q8WWY6 194 aa15.8■□□□□ 0.12
NEK3-202ENST00000550841 MAP1LC3BQ9GZQ8 125 aa15.8■□□□□ 0.12
NEK3-202ENST00000550841 EXOC3-AS1Q8N2X6 119 aa15.79■□□□□ 0.12
NEK3-202ENST00000550841 OR4B1Q8NGF8 309 aa15.79■□□□□ 0.12
NEK3-202ENST00000550841 OR8A1Q8NGG7 326 aa15.79■□□□□ 0.12
NEK3-202ENST00000550841 OR10J6PQ8NGY7 276 aa15.79■□□□□ 0.12
NEK3-202ENST00000550841 RXFP4Q8TDU9 374 aa15.79■□□□□ 0.12
NEK3-202ENST00000550841 ASCL2Q99929 193 aa15.79■□□□□ 0.12
NEK3-202ENST00000550841 Q9H3A6 140 aa15.79■□□□□ 0.12
NEK3-202ENST00000550841 OTORQ9NRC9 128 aa15.79■□□□□ 0.12
NEK3-202ENST00000550841 AGRNO00468 2067 aa15.79■□□□□ 0.12
NEK3-202ENST00000550841 ZNF705FA8MVS1 300 aaPredicted RBP15.78■□□□□ 0.12
NEK3-202ENST00000550841 F6UB75 175 aa15.78■□□□□ 0.12
NEK3-202ENST00000550841 H2AFB1P0C5Y9 115 aa15.78■□□□□ 0.12
NEK3-202ENST00000550841 FHITP49789 147 aa15.78■□□□□ 0.12
NEK3-202ENST00000550841 GDF5OSQ5U4N7 250 aa15.78■□□□□ 0.12
NEK3-202ENST00000550841 SFT2D1Q8WV19 159 aa15.78■□□□□ 0.12
NEK3-202ENST00000550841 ZMAT4Q9H898 229 aa15.78■□□□□ 0.12
NEK3-202ENST00000550841 BOLA1Q9Y3E2 137 aa15.78■□□□□ 0.12
NEK3-202ENST00000550841 PGPA6NDG6 321 aa15.77■□□□□ 0.12
NEK3-202ENST00000550841 TEX46H3BTG2 121 aa15.77■□□□□ 0.12
NEK3-202ENST00000550841 DEFB1P60022 68 aa15.77■□□□□ 0.12
NEK3-202ENST00000550841 ARL6IP6Q8N6S5 226 aa15.77■□□□□ 0.12
NEK3-202ENST00000550841 CNN1P51911 297 aaKnown RBP15.76■□□□□ 0.11
NEK3-202ENST00000550841 FGF8P55075 233 aaPredicted RBP15.76■□□□□ 0.11
NEK3-202ENST00000550841 HIST1H1AQ02539 215 aaPredicted RBP15.76■□□□□ 0.11
NEK3-202ENST00000550841 Q6ZWC4 215 aa15.76■□□□□ 0.11
NEK3-202ENST00000550841 CMTM2Q8TAZ6 248 aa15.76■□□□□ 0.11
NEK3-202ENST00000550841 SPATA25Q9BR10 227 aa15.76■□□□□ 0.11
NEK3-202ENST00000550841 PPP1R14DQ9NXH3 145 aa15.76■□□□□ 0.11
NEK3-202ENST00000550841 A0A1W2PRE2 83 aa15.75■□□□□ 0.11
NEK3-202ENST00000550841 A8MTW9 85 aa15.75■□□□□ 0.11
NEK3-202ENST00000550841 M0R3E3 92 aa15.75■□□□□ 0.11
NEK3-202ENST00000550841 IGKV3-20P01619 116 aa15.75■□□□□ 0.11
NEK3-202ENST00000550841 TM2D3Q9BRN9 247 aa15.75■□□□□ 0.11
NEK3-202ENST00000550841 C1QTNF4Q9BXJ3 329 aa15.75■□□□□ 0.11
NEK3-202ENST00000550841 NKX6-2Q9C056 277 aaPredicted RBP15.75■□□□□ 0.11
NEK3-202ENST00000550841 BOLA2-SMG1P6H3BVE0 249 aa15.74■□□□□ 0.11
NEK3-202ENST00000550841 CA1P00915 261 aaPredicted RBP15.74■□□□□ 0.11
NEK3-202ENST00000550841 HBE1P02100 147 aa15.74■□□□□ 0.11
NEK3-202ENST00000550841 PPT1P50897 306 aa15.74■□□□□ 0.11
NEK3-202ENST00000550841 TMPRSS5Q9H3S3 457 aa15.74■□□□□ 0.11
NEK3-202ENST00000550841 PRAC2D3DTV9 90 aa15.73■□□□□ 0.11
NEK3-202ENST00000550841 ZNF705DP0CH99 300 aaPredicted RBP15.73■□□□□ 0.11
NEK3-202ENST00000550841 ZNF705BP0CI00 300 aaPredicted RBP15.73■□□□□ 0.11
NEK3-202ENST00000550841 LINC00477Q96M19 166 aa15.73■□□□□ 0.11
NEK3-202ENST00000550841 TRAV1-1A0A0B4J248 108 aa15.72■□□□□ 0.11
NEK3-202ENST00000550841 ZNF705EA8MWA4 302 aaPredicted RBP15.72■□□□□ 0.11
NEK3-202ENST00000550841 AMBPP02760 352 aa15.72■□□□□ 0.11
NEK3-202ENST00000550841 ALKAL2Q6UX46 152 aa15.72■□□□□ 0.11
NEK3-202ENST00000550841 TP53TG1Q9Y2A0 90 aa15.72■□□□□ 0.11
NEK3-202ENST00000550841 RBAKDNA6NC62 111 aa15.71■□□□□ 0.11
NEK3-202ENST00000550841 SLC25A5P05141 298 aaKnown RBP15.71■□□□□ 0.11
NEK3-202ENST00000550841 SUMO1P63165 101 aaKnown RBP15.71■□□□□ 0.11
NEK3-202ENST00000550841 BLOC1S1P78537 153 aa15.71■□□□□ 0.11
NEK3-202ENST00000550841 RCHY1Q96PM5 261 aa15.71■□□□□ 0.11
NEK3-202ENST00000550841 ARL2-SNX15V9GYD0 113 aa15.71■□□□□ 0.11
NEK3-202ENST00000550841 DIRC3C9JPN6 131 aa15.7■□□□□ 0.1
NEK3-202ENST00000550841 NPIPB6E9PJ23 425 aa15.7■□□□□ 0.1
NEK3-202ENST00000550841 TSPOP30536 169 aa15.7■□□□□ 0.1
NEK3-202ENST00000550841 C9orf47Q6ZRZ4 202 aa15.7■□□□□ 0.1
NEK3-202ENST00000550841 C5orf17Q8NAS9 161 aa15.7■□□□□ 0.1
NEK3-202ENST00000550841 SERTM2A0A1B0GWG4 89 aa15.69■□□□□ 0.1
NEK3-202ENST00000550841 FAM74A7A6NL05 159 aa15.69■□□□□ 0.1
NEK3-202ENST00000550841 SPRY2O43597 315 aa15.69■□□□□ 0.1
NEK3-202ENST00000550841 UBE2G2P60604 165 aa15.69■□□□□ 0.1
NEK3-202ENST00000550841 TMEM78Q5T7P6 136 aa15.69■□□□□ 0.1
NEK3-202ENST00000550841 AMTNQ6UX39 209 aa15.69■□□□□ 0.1
NEK3-202ENST00000550841 RNF183Q96D59 192 aa15.69■□□□□ 0.1
NEK3-202ENST00000550841 ODF3Q96PU9 254 aa15.69■□□□□ 0.1
NEK3-202ENST00000550841 XCL2Q9UBD3 114 aa15.69■□□□□ 0.1
NEK3-202ENST00000550841 A0A1B0GV50 99 aa15.68■□□□□ 0.1
NEK3-202ENST00000550841 K7EQM0 130 aa15.68■□□□□ 0.1
NEK3-202ENST00000550841 GIG44P09565 113 aaPredicted RBP15.68■□□□□ 0.1
NEK3-202ENST00000550841 DEFB135Q30KP9 77 aa15.68■□□□□ 0.1
NEK3-202ENST00000550841 AGPAT4-IT1Q9H0P7 198 aa15.68■□□□□ 0.1
NEK3-202ENST00000550841 SLC35B3Q9H1N7 401 aa15.68■□□□□ 0.1
NEK3-202ENST00000550841 EPDR1Q9UM22 224 aa15.68■□□□□ 0.1
NEK3-202ENST00000550841 IGKV2-40A0A087WW87 121 aaPredicted RBP15.67■□□□□ 0.1
NEK3-202ENST00000550841 IFNA7P01567 189 aa15.67■□□□□ 0.1
NEK3-202ENST00000550841 IGKV2D-40P01614 121 aaPredicted RBP15.67■□□□□ 0.1
NEK3-202ENST00000550841 PRB4P10163 310 aaPredicted RBP15.67■□□□□ 0.1
NEK3-202ENST00000550841 LEPP41159 167 aa15.67■□□□□ 0.1
NEK3-202ENST00000550841 FXYD7P58549 80 aa15.67■□□□□ 0.1
NEK3-202ENST00000550841 CST9LP1Q5W188 147 aa15.67■□□□□ 0.1
NEK3-202ENST00000550841 OVOL2Q9BRP0 275 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms