RNA–Protein interactions for RNA: ENST00000548825.6

PRPF40B-209, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRPF40B, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-209ENST00000548825 IGHV1-24A0A0C4DH33 117 aa10.74□□□□□ -0.69
PRPF40B-209ENST00000548825 TMEM189A5PLL7 270 aa10.74□□□□□ -0.69
PRPF40B-209ENST00000548825 LYZL1Q6UWQ5 148 aa10.74□□□□□ -0.69
PRPF40B-209ENST00000548825 LCNL1Q6ZST4 164 aa10.74□□□□□ -0.69
PRPF40B-209ENST00000548825 VGLL1Q99990 258 aa10.74□□□□□ -0.69
PRPF40B-209ENST00000548825 SHANK2-AS3Q9BTD1 123 aa10.74□□□□□ -0.69
PRPF40B-209ENST00000548825 CBY3A6NI87 242 aa10.74□□□□□ -0.69
PRPF40B-209ENST00000548825 CRYGBP07316 175 aa10.74□□□□□ -0.69
PRPF40B-209ENST00000548825 IGLC2P0DOY2 106 aa10.74□□□□□ -0.69
PRPF40B-209ENST00000548825 IGLC3P0DOY3 106 aa10.74□□□□□ -0.69
PRPF40B-209ENST00000548825 KLHDC1Q8N7A1 406 aa10.74□□□□□ -0.69
PRPF40B-209ENST00000548825 TNFRSF14Q92956 283 aa10.74□□□□□ -0.69
PRPF40B-209ENST00000548825 COL25A1Q9BXS0 654 aaPredicted RBP10.74□□□□□ -0.69
PRPF40B-209ENST00000548825 GOLT1BQ9Y3E0 138 aa10.74□□□□□ -0.69
PRPF40B-209ENST00000548825 MYCNOSP40205 109 aa10.73□□□□□ -0.69
PRPF40B-209ENST00000548825 Q8N976 141 aa10.73□□□□□ -0.69
PRPF40B-209ENST00000548825 D6R8Y8 96 aa10.73□□□□□ -0.69
PRPF40B-209ENST00000548825 IGHV3-11P01762 117 aa10.73□□□□□ -0.69
PRPF40B-209ENST00000548825 FAM231DQ6ZW35 169 aa10.73□□□□□ -0.69
PRPF40B-209ENST00000548825 C20orf144Q9BQM9 153 aa10.73□□□□□ -0.69
PRPF40B-209ENST00000548825 OR5AL1P0C617 328 aa10.73□□□□□ -0.69
PRPF40B-209ENST00000548825 EVI2AP22794 236 aa10.73□□□□□ -0.69
PRPF40B-209ENST00000548825 DEFB1P60022 68 aa10.73□□□□□ -0.69
PRPF40B-209ENST00000548825 RHOGP84095 191 aa10.73□□□□□ -0.69
PRPF40B-209ENST00000548825 COL5A1-AS1Q5SY13 56 aa10.73□□□□□ -0.69
PRPF40B-209ENST00000548825 WFDC12Q8WWY7 111 aa10.73□□□□□ -0.69
PRPF40B-209ENST00000548825 MSRB1Q9NZV6 116 aa10.73□□□□□ -0.69
PRPF40B-209ENST00000548825 THYN1Q9P016 225 aa10.73□□□□□ -0.69
PRPF40B-209ENST00000548825 IFI27P40305 119 aaPredicted RBP10.72□□□□□ -0.69
PRPF40B-209ENST00000548825 ZNF124Q15973 351 aa10.72□□□□□ -0.69
PRPF40B-209ENST00000548825 LBHQ53QV2 105 aaPredicted RBP10.72□□□□□ -0.69
PRPF40B-209ENST00000548825 SIGLEC15Q6ZMC9 328 aa10.72□□□□□ -0.69
PRPF40B-209ENST00000548825 FANCD2OSQ96PS1 177 aa10.72□□□□□ -0.69
PRPF40B-209ENST00000548825 MLST8Q9BVC4 326 aa10.72□□□□□ -0.69
PRPF40B-209ENST00000548825 SOX21Q9Y651 276 aaPredicted RBP10.72□□□□□ -0.69
PRPF40B-209ENST00000548825 LOC102724200A0A096LPH7 203 aaPredicted RBP10.72□□□□□ -0.69
PRPF40B-209ENST00000548825 SAA4P35542 130 aa10.72□□□□□ -0.69
PRPF40B-209ENST00000548825 AP5S1Q9NUS5 200 aa10.72□□□□□ -0.69
PRPF40B-209ENST00000548825 ABCA2Q9BZC7 2435 aa10.72□□□□□ -0.69
PRPF40B-209ENST00000548825 C20orf202A1L168 122 aa10.71□□□□□ -0.69
PRPF40B-209ENST00000548825 PRTN3P24158 256 aa10.71□□□□□ -0.69
PRPF40B-209ENST00000548825 RIGQ13278 110 aa10.71□□□□□ -0.69
PRPF40B-209ENST00000548825 UFC1Q9Y3C8 167 aa10.71□□□□□ -0.69
PRPF40B-209ENST00000548825 MTORP42345 2549 aa10.71□□□□□ -0.69
PRPF40B-209ENST00000548825 ATP6V0E1O15342 81 aa10.71□□□□□ -0.69
PRPF40B-209ENST00000548825 CRIP1P50238 77 aa10.71□□□□□ -0.69
PRPF40B-209ENST00000548825 NHLH1Q02575 133 aa10.71□□□□□ -0.69
PRPF40B-209ENST00000548825 LOXL1Q08397 574 aaPredicted RBP10.71□□□□□ -0.69
PRPF40B-209ENST00000548825 PSG3Q16557 428 aa10.71□□□□□ -0.69
PRPF40B-209ENST00000548825 URB1-AS1Q96HZ7 61 aa10.71□□□□□ -0.69
PRPF40B-209ENST00000548825 ZNF414Q96IQ9 312 aa10.71□□□□□ -0.69
PRPF40B-209ENST00000548825 MAP1LC3CQ9BXW4 147 aa10.71□□□□□ -0.69
PRPF40B-209ENST00000548825 C7orf69Q9H7B7 122 aa10.71□□□□□ -0.69
PRPF40B-209ENST00000548825 C1RLQ9NZP8 487 aa10.71□□□□□ -0.69
PRPF40B-209ENST00000548825 MRPL27Q9P0M9 148 aaKnown RBP10.71□□□□□ -0.69
PRPF40B-209ENST00000548825 VAMP3Q15836 100 aa10.71□□□□□ -0.7
PRPF40B-209ENST00000548825 RABAC1Q9UI14 185 aa10.71□□□□□ -0.7
PRPF40B-209ENST00000548825 SH2D1AO60880 128 aa10.7□□□□□ -0.7
PRPF40B-209ENST00000548825 NUDT3O95989 172 aa10.7□□□□□ -0.7
PRPF40B-209ENST00000548825 SRD5A1P18405 259 aa10.7□□□□□ -0.7
PRPF40B-209ENST00000548825 TSPOP30536 169 aa10.7□□□□□ -0.7
PRPF40B-209ENST00000548825 NAA38Q9BRA0 125 aaKnown RBP10.7□□□□□ -0.7
PRPF40B-209ENST00000548825 HIF1ANQ9NWT6 349 aa10.7□□□□□ -0.7
PRPF40B-209ENST00000548825 TRAV9-2A0A087WT02 112 aa10.7□□□□□ -0.7
PRPF40B-209ENST00000548825 INS-IGF2F8WCM5 200 aa10.7□□□□□ -0.7
PRPF40B-209ENST00000548825 H3BRN7 92 aa10.7□□□□□ -0.7
PRPF40B-209ENST00000548825 IGLV2-11P01706 119 aa10.7□□□□□ -0.7
PRPF40B-209ENST00000548825 ESDP10768 282 aa10.7□□□□□ -0.7
PRPF40B-209ENST00000548825 CKS2P33552 79 aa10.7□□□□□ -0.7
PRPF40B-209ENST00000548825 MPV17L2Q567V2 206 aa10.7□□□□□ -0.7
PRPF40B-209ENST00000548825 C8orf31Q8N9H6 132 aa10.7□□□□□ -0.7
PRPF40B-209ENST00000548825 GLMPQ8WWB7 406 aa10.7□□□□□ -0.7
PRPF40B-209ENST00000548825 RNF24Q9Y225 148 aa10.7□□□□□ -0.7
PRPF40B-209ENST00000548825 KLF12Q9Y4X4 402 aa10.7□□□□□ -0.7
PRPF40B-209ENST00000548825 PRAC2D3DTV9 90 aa10.69□□□□□ -0.7
PRPF40B-209ENST00000548825 PTTG1IPP53801 180 aa10.69□□□□□ -0.7
PRPF40B-209ENST00000548825 TM4SF20Q53R12 229 aa10.69□□□□□ -0.7
PRPF40B-209ENST00000548825 A0A087X0K7 114 aa10.69□□□□□ -0.7
PRPF40B-209ENST00000548825 C19orf71A6NCJ1 209 aa10.69□□□□□ -0.7
PRPF40B-209ENST00000548825 CCDC144NLQ6NUI1 221 aa10.69□□□□□ -0.7
PRPF40B-209ENST00000548825 ZNF562Q6V9R5 426 aa10.69□□□□□ -0.7
PRPF40B-209ENST00000548825 CFHR4Q92496 578 aa10.69□□□□□ -0.7
PRPF40B-209ENST00000548825 SYS1-DBNDD2H3BUS1 97 aa10.69□□□□□ -0.7
PRPF40B-209ENST00000548825 GNLYP22749 145 aa10.69□□□□□ -0.7
PRPF40B-209ENST00000548825 PVRIGQ6DKI7 326 aa10.69□□□□□ -0.7
PRPF40B-209ENST00000548825 MSRB2Q9Y3D2 182 aa10.69□□□□□ -0.7
PRPF40B-209ENST00000548825 Q6ZQT7 251 aa10.68□□□□□ -0.7
PRPF40B-209ENST00000548825 A0A1B0GXF2 115 aa10.68□□□□□ -0.7
PRPF40B-209ENST00000548825 C2orf70A6NJV1 201 aa10.68□□□□□ -0.7
PRPF40B-209ENST00000548825 LY6LH3BQJ8 138 aa10.68□□□□□ -0.7
PRPF40B-209ENST00000548825 M0QZK8 103 aa10.68□□□□□ -0.7
PRPF40B-209ENST00000548825 RPL7P18124 248 aaKnown RBP10.68□□□□□ -0.7
PRPF40B-209ENST00000548825 TMEM191AQ9H0A3 160 aa10.68□□□□□ -0.7
PRPF40B-209ENST00000548825 ANKRD17O75179 2603 aaKnown RBP10.68□□□□□ -0.7
PRPF40B-209ENST00000548825 IGHV7-81A0A0B4J1V7 117 aa10.68□□□□□ -0.7
PRPF40B-209ENST00000548825 GATA1P15976 413 aaPredicted RBP10.68□□□□□ -0.7
PRPF40B-209ENST00000548825 ZNF80P51504 273 aaPredicted RBP10.68□□□□□ -0.7
PRPF40B-209ENST00000548825 ATP5L2Q7Z4Y8 100 aa10.68□□□□□ -0.7
PRPF40B-209ENST00000548825 PRELID3AQ96N28 172 aa10.68□□□□□ -0.7
PRPF40B-209ENST00000548825 PRSS22Q9GZN4 317 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 112.4 ms