RNA–Protein interactions for RNA: ENST00000546215.5

SCARB1-211, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARB1, Length 1,597 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-211ENST00000546215 EXOC3-AS1Q8N2X6 119 aa15.24■□□□□ 0.03
SCARB1-211ENST00000546215 CLUHP3Q96NS8 147 aa15.24■□□□□ 0.03
SCARB1-211ENST00000546215 SPATA25Q9BR10 227 aa15.24■□□□□ 0.03
SCARB1-211ENST00000546215 ZMAT4Q9H898 229 aa15.24■□□□□ 0.03
SCARB1-211ENST00000546215 CTXND1A0A1B0GTU2 59 aa15.23■□□□□ 0.03
SCARB1-211ENST00000546215 A8MTW9 85 aa15.23■□□□□ 0.03
SCARB1-211ENST00000546215 IGKV3-20P01619 116 aa15.23■□□□□ 0.03
SCARB1-211ENST00000546215 ZNF705DP0CH99 300 aaPredicted RBP15.23■□□□□ 0.03
SCARB1-211ENST00000546215 ZNF705BP0CI00 300 aaPredicted RBP15.23■□□□□ 0.03
SCARB1-211ENST00000546215 Q6ZWC4 215 aa15.23■□□□□ 0.03
SCARB1-211ENST00000546215 TMED6Q8WW62 240 aa15.23■□□□□ 0.03
SCARB1-211ENST00000546215 MRPL53Q96EL3 112 aaKnown RBP15.23■□□□□ 0.03
SCARB1-211ENST00000546215 UMAD1C9J7I0 102 aa15.22■□□□□ 0.03
SCARB1-211ENST00000546215 PRAC2D3DTV9 90 aa15.22■□□□□ 0.03
SCARB1-211ENST00000546215 M0R3E3 92 aa15.22■□□□□ 0.03
SCARB1-211ENST00000546215 FHITP49789 147 aa15.22■□□□□ 0.03
SCARB1-211ENST00000546215 MORN3Q6PF18 240 aaPredicted RBP15.22■□□□□ 0.03
SCARB1-211ENST00000546215 OR4B1Q8NGF8 309 aa15.22■□□□□ 0.03
SCARB1-211ENST00000546215 OR8A1Q8NGG7 326 aa15.22■□□□□ 0.03
SCARB1-211ENST00000546215 SUN5Q8TC36 379 aa15.22■□□□□ 0.03
SCARB1-211ENST00000546215 AAMDCQ9H7C9 122 aa15.22■□□□□ 0.03
SCARB1-211ENST00000546215 RETNQ9HD89 108 aa15.22■□□□□ 0.03
SCARB1-211ENST00000546215 CXorf1O96002 111 aa15.21■□□□□ 0.03
SCARB1-211ENST00000546215 CA1P00915 261 aaPredicted RBP15.21■□□□□ 0.03
SCARB1-211ENST00000546215 C4BPBP20851 252 aa15.21■□□□□ 0.03
SCARB1-211ENST00000546215 GCHFRP30047 84 aa15.21■□□□□ 0.03
SCARB1-211ENST00000546215 CNN1P51911 297 aaKnown RBP15.21■□□□□ 0.03
SCARB1-211ENST00000546215 RANP62826 216 aaKnown RBP15.21■□□□□ 0.03
SCARB1-211ENST00000546215 ICAM4Q14773 271 aa15.21■□□□□ 0.03
SCARB1-211ENST00000546215 LYPD1Q8N2G4 141 aa15.21■□□□□ 0.03
SCARB1-211ENST00000546215 PRELID1Q9Y255 219 aa15.21■□□□□ 0.03
SCARB1-211ENST00000546215 DUSP14O95147 198 aaKnown RBP15.2■□□□□ 0.02
SCARB1-211ENST00000546215 DEFB135Q30KP9 77 aa15.2■□□□□ 0.02
SCARB1-211ENST00000546215 NUTF2P61970 127 aaKnown RBP15.19■□□□□ 0.02
SCARB1-211ENST00000546215 AMTNQ6UX39 209 aa15.19■□□□□ 0.02
SCARB1-211ENST00000546215 RCHY1Q96PM5 261 aa15.19■□□□□ 0.02
SCARB1-211ENST00000546215 OVOL2Q9BRP0 275 aa15.19■□□□□ 0.02
SCARB1-211ENST00000546215 Q9H3A6 140 aa15.19■□□□□ 0.02
SCARB1-211ENST00000546215 HIST1H1AQ02539 215 aaPredicted RBP15.19■□□□□ 0.02
SCARB1-211ENST00000546215 TP53TG1Q9Y2A0 90 aa15.19■□□□□ 0.02
SCARB1-211ENST00000546215 EIF5AL1Q6IS14 154 aaKnown RBP15.18■□□□□ 0.02
SCARB1-211ENST00000546215 RNF183Q96D59 192 aa15.18■□□□□ 0.02
SCARB1-211ENST00000546215 SLC35B3Q9H1N7 401 aa15.18■□□□□ 0.02
SCARB1-211ENST00000546215 U3KQK5 164 aa15.18■□□□□ 0.02
SCARB1-211ENST00000546215 STAB2Q8WWQ8 2551 aa15.17■□□□□ 0.02
SCARB1-211ENST00000546215 SPRY2O43597 315 aa15.17■□□□□ 0.02
SCARB1-211ENST00000546215 FGF8P55075 233 aaPredicted RBP15.17■□□□□ 0.02
SCARB1-211ENST00000546215 DPPA3Q6W0C5 159 aa15.17■□□□□ 0.02
SCARB1-211ENST00000546215 FAM213BQ8TBF2 198 aa15.17■□□□□ 0.02
SCARB1-211ENST00000546215 TMEM167BQ9NRX6 74 aa15.17■□□□□ 0.02
SCARB1-211ENST00000546215 BOLA1Q9Y3E2 137 aa15.17■□□□□ 0.02
SCARB1-211ENST00000546215 MAP1LC3B2A6NCE7 125 aa15.16■□□□□ 0.02
SCARB1-211ENST00000546215 FXYD7P58549 80 aa15.16■□□□□ 0.02
SCARB1-211ENST00000546215 CSNK1G2-AS1Q8NCQ2 148 aa15.16■□□□□ 0.02
SCARB1-211ENST00000546215 OR10J6PQ8NGY7 276 aa15.16■□□□□ 0.02
SCARB1-211ENST00000546215 MAP1LC3BQ9GZQ8 125 aa15.16■□□□□ 0.02
SCARB1-211ENST00000546215 TMPRSS5Q9H3S3 457 aa15.16■□□□□ 0.02
SCARB1-211ENST00000546215 OTORQ9NRC9 128 aa15.16■□□□□ 0.02
SCARB1-211ENST00000546215 PGPA6NDG6 321 aa15.15■□□□□ 0.02
SCARB1-211ENST00000546215 MBD3L1Q8WWY6 194 aa15.15■□□□□ 0.02
SCARB1-211ENST00000546215 C1QTNF4Q9BXJ3 329 aa15.15■□□□□ 0.02
SCARB1-211ENST00000546215 XCL2Q9UBD3 114 aa15.15■□□□□ 0.02
SCARB1-211ENST00000546215 IQCF2Q8IXL9 164 aa15.15■□□□□ 0.02
SCARB1-211ENST00000546215 NPIPB6E9PJ23 425 aa15.14■□□□□ 0.01
SCARB1-211ENST00000546215 SULT1A2P50226 295 aa15.14■□□□□ 0.01
SCARB1-211ENST00000546215 RAB5CP51148 216 aa15.14■□□□□ 0.01
SCARB1-211ENST00000546215 CSN1S1P47710 185 aa15.13■□□□□ 0.01
SCARB1-211ENST00000546215 SFT2D1Q8WV19 159 aa15.13■□□□□ 0.01
SCARB1-211ENST00000546215 IGKV2-40A0A087WW87 121 aaPredicted RBP15.12■□□□□ 0.01
SCARB1-211ENST00000546215 IGKV2D-40P01614 121 aaPredicted RBP15.12■□□□□ 0.01
SCARB1-211ENST00000546215 ERCC8Q13216 396 aa15.12■□□□□ 0.01
SCARB1-211ENST00000546215 SPINK13Q1W4C9 94 aa15.12■□□□□ 0.01
SCARB1-211ENST00000546215 FAM74A1Q5RGS3 127 aa15.12■□□□□ 0.01
SCARB1-211ENST00000546215 RXFP4Q8TDU9 374 aa15.12■□□□□ 0.01
SCARB1-211ENST00000546215 BOLA2-SMG1P6H3BVE0 249 aa15.11■□□□□ 0.01
SCARB1-211ENST00000546215 M0R2Z0 102 aa15.11■□□□□ 0.01
SCARB1-211ENST00000546215 H2AFB1P0C5Y9 115 aa15.11■□□□□ 0.01
SCARB1-211ENST00000546215 CT45A10P0DMU9 189 aa15.11■□□□□ 0.01
SCARB1-211ENST00000546215 C9orf47Q6ZRZ4 202 aa15.11■□□□□ 0.01
SCARB1-211ENST00000546215 ARL6IP6Q8N6S5 226 aa15.11■□□□□ 0.01
SCARB1-211ENST00000546215 AGPAT4-IT1Q9H0P7 198 aa15.11■□□□□ 0.01
SCARB1-211ENST00000546215 A0A1W2PRE2 83 aa15.11■□□□□ 0.01
SCARB1-211ENST00000546215 DIRC3C9JPN6 131 aa15.11■□□□□ 0.01
SCARB1-211ENST00000546215 CRXO43186 299 aaPredicted RBP15.11■□□□□ 0.01
SCARB1-211ENST00000546215 CMTM2Q8TAZ6 248 aa15.11■□□□□ 0.01
SCARB1-211ENST00000546215 LINC00477Q96M19 166 aa15.11■□□□□ 0.01
SCARB1-211ENST00000546215 RARRES2Q99969 163 aa15.11■□□□□ 0.01
SCARB1-211ENST00000546215 VGLL1Q99990 258 aa15.11■□□□□ 0.01
SCARB1-211ENST00000546215 PPP1R14DQ9NXH3 145 aa15.11■□□□□ 0.01
SCARB1-211ENST00000546215 GGTLC3B5MD39 225 aa15.1■□□□□ 0.01
SCARB1-211ENST00000546215 AMBPP02760 352 aa15.1■□□□□ 0.01
SCARB1-211ENST00000546215 SUMO1P63165 101 aaKnown RBP15.1■□□□□ 0.01
SCARB1-211ENST00000546215 OR11H2Q8NH07 326 aa15.1■□□□□ 0.01
SCARB1-211ENST00000546215 ODF3Q96PU9 254 aa15.1■□□□□ 0.01
SCARB1-211ENST00000546215 YTHDF2Q9Y5A9 579 aaKnown RBP15.1■□□□□ 0.01
SCARB1-211ENST00000546215 DNAH7Q8WXX0 4024 aa15.09■□□□□ 0.01
SCARB1-211ENST00000546215 RBAKDNA6NC62 111 aa15.09■□□□□ 0.01
SCARB1-211ENST00000546215 ZNF705EA8MWA4 302 aaPredicted RBP15.09■□□□□ 0.01
SCARB1-211ENST00000546215 CDKN1BP46527 198 aa15.09■□□□□ 0.01
SCARB1-211ENST00000546215 UBE2G2P60604 165 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms