RNA–Protein interactions for RNA: ENST00000546211.5

SKP2-208, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 5 BASIC

Gene SKP2, Length 1,589 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-208ENST00000546211 FN1P02751 2386 aaKnown RBP14.76□□□□□ -0.05
SKP2-208ENST00000546211 NSD1Q96L73 2696 aaPredicted RBP14.76□□□□□ -0.05
SKP2-208ENST00000546211 C2orf70A6NJV1 201 aa14.76□□□□□ -0.05
SKP2-208ENST00000546211 TSPAN4O14817 238 aa14.76□□□□□ -0.05
SKP2-208ENST00000546211 RNF212Q495C1 297 aa14.76□□□□□ -0.05
SKP2-208ENST00000546211 TCF24Q7RTU0 167 aa14.76□□□□□ -0.05
SKP2-208ENST00000546211 NRN1Q9NPD7 142 aa14.76□□□□□ -0.05
SKP2-208ENST00000546211 CBLN1P23435 193 aa14.75□□□□□ -0.05
SKP2-208ENST00000546211 HLA-DMBP28068 263 aa14.75□□□□□ -0.05
SKP2-208ENST00000546211 TMEM75Q8N9X5 138 aa14.75□□□□□ -0.05
SKP2-208ENST00000546211 RAX2Q96IS3 184 aa14.75□□□□□ -0.05
SKP2-208ENST00000546211 SGK494Q96LW2 274 aa14.75□□□□□ -0.05
SKP2-208ENST00000546211 CTDSP1Q9GZU7 261 aa14.75□□□□□ -0.05
SKP2-208ENST00000546211 SREK1IP1Q8N9Q2 155 aaPredicted RBP14.74□□□□□ -0.05
SKP2-208ENST00000546211 OR9G4Q8NGQ1 327 aa14.74□□□□□ -0.05
SKP2-208ENST00000546211 MRPL53Q96EL3 112 aaKnown RBP14.74□□□□□ -0.05
SKP2-208ENST00000546211 SMIM12Q96EX1 92 aa14.74□□□□□ -0.05
SKP2-208ENST00000546211 TRAV8-2A0A0B4J237 113 aa14.73□□□□□ -0.05
SKP2-208ENST00000546211 TRBV6-1A0A0K0K1D8 114 aa14.73□□□□□ -0.05
SKP2-208ENST00000546211 K7EN84 100 aa14.73□□□□□ -0.05
SKP2-208ENST00000546211 CCL24O00175 119 aa14.73□□□□□ -0.05
SKP2-208ENST00000546211 MGST1P10620 155 aaKnown RBP14.73□□□□□ -0.05
SKP2-208ENST00000546211 FOLR2P14207 255 aa14.73□□□□□ -0.05
SKP2-208ENST00000546211 FHL3Q13643 280 aa14.73□□□□□ -0.05
SKP2-208ENST00000546211 PSG3Q16557 428 aa14.73□□□□□ -0.05
SKP2-208ENST00000546211 LCN12Q6JVE5 192 aa14.73□□□□□ -0.05
SKP2-208ENST00000546211 RNF182Q8N6D2 247 aa14.73□□□□□ -0.05
SKP2-208ENST00000546211 DLX4Q92988 240 aaPredicted RBP14.73□□□□□ -0.05
SKP2-208ENST00000546211 ANAPC16Q96DE5 110 aa14.73□□□□□ -0.05
SKP2-208ENST00000546211 TMEM242Q9NWH2 141 aa14.73□□□□□ -0.05
SKP2-208ENST00000546211 IGKV3-7A0A075B6H7 116 aa14.73□□□□□ -0.05
SKP2-208ENST00000546211 LTAP01374 205 aa14.73□□□□□ -0.05
SKP2-208ENST00000546211 IGLV2-8P01709 118 aa14.73□□□□□ -0.05
SKP2-208ENST00000546211 FLI1Q01543 452 aaPredicted RBP14.73□□□□□ -0.05
SKP2-208ENST00000546211 SAMD13Q5VXD3 122 aa14.73□□□□□ -0.05
SKP2-208ENST00000546211 Q86TA4 180 aa14.73□□□□□ -0.05
SKP2-208ENST00000546211 SFRP2Q96HF1 295 aa14.73□□□□□ -0.05
SKP2-208ENST00000546211 TUBA4BQ9H853 241 aa14.73□□□□□ -0.05
SKP2-208ENST00000546211 TRAV8-1A0A0A6YYK1 113 aa14.72□□□□□ -0.05
SKP2-208ENST00000546211 FBLL1A6NHQ2 334 aaKnown RBP14.72□□□□□ -0.05
SKP2-208ENST00000546211 ZNF705FA8MVS1 300 aaPredicted RBP14.72□□□□□ -0.05
SKP2-208ENST00000546211 H7BYZ3 331 aa14.72□□□□□ -0.05
SKP2-208ENST00000546211 PPP1R2P9O14990 202 aa14.72□□□□□ -0.05
SKP2-208ENST00000546211 PRNTQ86SH4 94 aa14.72□□□□□ -0.05
SKP2-208ENST00000546211 NHLRC2Q8NBF2 726 aa14.72□□□□□ -0.05
SKP2-208ENST00000546211 CXorf65A6NEN9 183 aa14.71□□□□□ -0.05
SKP2-208ENST00000546211 SOCS3O14543 225 aa14.71□□□□□ -0.05
SKP2-208ENST00000546211 GCGP01275 180 aa14.71□□□□□ -0.05
SKP2-208ENST00000546211 IGLV2-11P01706 119 aa14.71□□□□□ -0.05
SKP2-208ENST00000546211 MLXQ9UH92 298 aa14.71□□□□□ -0.05
SKP2-208ENST00000546211 PSG8Q9UQ74 426 aa14.71□□□□□ -0.05
SKP2-208ENST00000546211 SELENOKQ9Y6D0 94 aa14.71□□□□□ -0.05
SKP2-208ENST00000546211 F8P00451 2351 aa14.7□□□□□ -0.06
SKP2-208ENST00000546211 IGKV2-40A0A087WW87 121 aaPredicted RBP14.7□□□□□ -0.06
SKP2-208ENST00000546211 IGKV2D-40P01614 121 aaPredicted RBP14.7□□□□□ -0.06
SKP2-208ENST00000546211 PRB4P10163 310 aaPredicted RBP14.7□□□□□ -0.06
SKP2-208ENST00000546211 FOXL1Q12952 345 aa14.7□□□□□ -0.06
SKP2-208ENST00000546211 OR5I1Q13606 314 aa14.7□□□□□ -0.06
SKP2-208ENST00000546211 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP14.7□□□□□ -0.06
SKP2-208ENST00000546211 ZFP30Q9Y2G7 519 aa14.7□□□□□ -0.06
SKP2-208ENST00000546211 ID1P41134 155 aa14.69□□□□□ -0.06
SKP2-208ENST00000546211 ERVFC1-1P60608 527 aa14.69□□□□□ -0.06
SKP2-208ENST00000546211 NSUN5P1Q3KNT7 163 aa14.69□□□□□ -0.06
SKP2-208ENST00000546211 NDUFA11Q86Y39 141 aa14.69□□□□□ -0.06
SKP2-208ENST00000546211 C15orf54Q8N8G6 183 aa14.69□□□□□ -0.06
SKP2-208ENST00000546211 OR10G8Q8NGN5 311 aa14.69□□□□□ -0.06
SKP2-208ENST00000546211 BIN3Q9NQY0 253 aa14.69□□□□□ -0.06
SKP2-208ENST00000546211 RBAKDNA6NC62 111 aa14.68□□□□□ -0.06
SKP2-208ENST00000546211 ADAMTSL5Q6ZMM2 481 aa14.68□□□□□ -0.06
SKP2-208ENST00000546211 TMEM183AQ8IXX5 376 aa14.68□□□□□ -0.06
SKP2-208ENST00000546211 GBGT1Q8N5D6 347 aa14.68□□□□□ -0.06
SKP2-208ENST00000546211 ZNF738Q8NE65 137 aa14.68□□□□□ -0.06
SKP2-208ENST00000546211 MLST8Q9BVC4 326 aa14.68□□□□□ -0.06
SKP2-208ENST00000546211 ADARB2-AS1A8MUL3 147 aa14.68□□□□□ -0.06
SKP2-208ENST00000546211 CSN3P07498 182 aa14.68□□□□□ -0.06
SKP2-208ENST00000546211 KRTAP10-3P60369 221 aa14.68□□□□□ -0.06
SKP2-208ENST00000546211 MS4A6AQ9H2W1 248 aa14.68□□□□□ -0.06
SKP2-208ENST00000546211 NF1P21359 2839 aa14.67□□□□□ -0.06
SKP2-208ENST00000546211 PRAC2D3DTV9 90 aa14.67□□□□□ -0.06
SKP2-208ENST00000546211 OVOL1O14753 267 aa14.67□□□□□ -0.06
SKP2-208ENST00000546211 PAFAH1B2P68402 229 aa14.67□□□□□ -0.06
SKP2-208ENST00000546211 IBA57Q5T440 356 aaKnown RBP14.67□□□□□ -0.06
SKP2-208ENST00000546211 WFDC3Q8IUB2 231 aa14.67□□□□□ -0.06
SKP2-208ENST00000546211 DYNLRB2Q8TF09 96 aa14.67□□□□□ -0.06
SKP2-208ENST00000546211 DCANP1Q8TF63 244 aa14.67□□□□□ -0.06
SKP2-208ENST00000546211 C20orf173Q96LM9 149 aa14.67□□□□□ -0.06
SKP2-208ENST00000546211 OSTCQ9NRP0 149 aa14.67□□□□□ -0.06
SKP2-208ENST00000546211 PRR27Q6MZM9 219 aa14.66□□□□□ -0.06
SKP2-208ENST00000546211 VGLL1Q99990 258 aa14.66□□□□□ -0.06
SKP2-208ENST00000546211 RNASE7Q9H1E1 156 aaKnown RBP14.66□□□□□ -0.06
SKP2-208ENST00000546211 S100PP25815 95 aa14.65□□□□□ -0.06
SKP2-208ENST00000546211 TFPI2P48307 235 aa14.65□□□□□ -0.06
SKP2-208ENST00000546211 SAPCD1Q5SSQ6 148 aa14.65□□□□□ -0.06
SKP2-208ENST00000546211 URGCP-MRPS24S4R325 110 aa14.65□□□□□ -0.06
SKP2-208ENST00000546211 SETXQ7Z333 2677 aaKnown RBP14.65□□□□□ -0.06
SKP2-208ENST00000546211 TMEM78Q5T7P6 136 aa14.64□□□□□ -0.07
SKP2-208ENST00000546211 FAM231DQ6ZW35 169 aa14.64□□□□□ -0.07
SKP2-208ENST00000546211 FAM24BQ8N5W8 94 aa14.64□□□□□ -0.07
SKP2-208ENST00000546211 NDFIP1Q9BT67 221 aa14.64□□□□□ -0.07
SKP2-208ENST00000546211 SNRPD3P62318 126 aaKnown RBP14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms