RNA–Protein interactions for RNA: ENST00000546080.5

SRP54-202, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 2,187 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-202ENST00000546080 PPIAL4CA0A0B4J2A2 164 aa11.14□□□□□ -0.63
SRP54-202ENST00000546080 PPIAL4GP0DN37 164 aa11.14□□□□□ -0.63
SRP54-202ENST00000546080 IGKV2-40A0A087WW87 121 aaPredicted RBP11.14□□□□□ -0.63
SRP54-202ENST00000546080 SHISA9B4DS77 424 aa11.14□□□□□ -0.63
SRP54-202ENST00000546080 GNG7O60262 68 aa11.14□□□□□ -0.63
SRP54-202ENST00000546080 IGKV2D-40P01614 121 aaPredicted RBP11.14□□□□□ -0.63
SRP54-202ENST00000546080 IGLV1-47P01700 117 aa11.14□□□□□ -0.63
SRP54-202ENST00000546080 EGR2P11161 476 aaPredicted RBP11.14□□□□□ -0.63
SRP54-202ENST00000546080 ODF1Q14990 250 aa11.14□□□□□ -0.63
SRP54-202ENST00000546080 SRSF8Q9BRL6 282 aaKnown RBP11.14□□□□□ -0.63
SRP54-202ENST00000546080 KAAG1Q9UBP8 84 aa11.14□□□□□ -0.63
SRP54-202ENST00000546080 LOC400499M0QZD8 3231 aa11.13□□□□□ -0.63
SRP54-202ENST00000546080 BUB1B-PAK6H3BSN5 160 aa11.13□□□□□ -0.63
SRP54-202ENST00000546080 K7ERJ3 54 aa11.13□□□□□ -0.63
SRP54-202ENST00000546080 LEPP41159 167 aa11.13□□□□□ -0.63
SRP54-202ENST00000546080 A0A1W2PRD5 423 aa11.13□□□□□ -0.63
SRP54-202ENST00000546080 A0A1W2PRF3 423 aa11.13□□□□□ -0.63
SRP54-202ENST00000546080 A0A1W2PRM7 423 aa11.13□□□□□ -0.63
SRP54-202ENST00000546080 IGKCP01834 107 aa11.13□□□□□ -0.63
SRP54-202ENST00000546080 PRSS1P07477 247 aa11.13□□□□□ -0.63
SRP54-202ENST00000546080 BMI1P35226 326 aa11.13□□□□□ -0.63
SRP54-202ENST00000546080 RPEQ96AT9 228 aa11.13□□□□□ -0.63
SRP54-202ENST00000546080 PRR25Q96S07 402 aa11.13□□□□□ -0.63
SRP54-202ENST00000546080 VGLL1Q99990 258 aa11.13□□□□□ -0.63
SRP54-202ENST00000546080 TTTY13Q9BZ97 58 aa11.13□□□□□ -0.63
SRP54-202ENST00000546080 ZMAT4Q9H898 229 aa11.13□□□□□ -0.63
SRP54-202ENST00000546080 CACNA1HO95180 2353 aa11.12□□□□□ -0.63
SRP54-202ENST00000546080 FCER1GP30273 86 aa11.12□□□□□ -0.63
SRP54-202ENST00000546080 BSPH1Q075Z2 132 aa11.12□□□□□ -0.63
SRP54-202ENST00000546080 COX8CQ7Z4L0 72 aa11.12□□□□□ -0.63
SRP54-202ENST00000546080 NHP2Q9NX24 153 aaKnown RBP11.12□□□□□ -0.63
SRP54-202ENST00000546080 HHLA3Q9XRX5 114 aa11.12□□□□□ -0.63
SRP54-202ENST00000546080 S4R3C0 116 aa11.12□□□□□ -0.63
SRP54-202ENST00000546080 IGLC6P0CF74 106 aa11.11□□□□□ -0.63
SRP54-202ENST00000546080 CLEC2AQ6UVW9 174 aa11.11□□□□□ -0.63
SRP54-202ENST00000546080 ZNF562Q6V9R5 426 aa11.11□□□□□ -0.63
SRP54-202ENST00000546080 RNF185Q96GF1 192 aa11.11□□□□□ -0.63
SRP54-202ENST00000546080 RAB1BQ9H0U4 201 aa11.11□□□□□ -0.63
SRP54-202ENST00000546080 TRBV25-1A0A075B6N4 114 aa11.11□□□□□ -0.63
SRP54-202ENST00000546080 NPIPB5A8MRT5 1133 aa11.11□□□□□ -0.63
SRP54-202ENST00000546080 COX7A1P24310 79 aa11.11□□□□□ -0.63
SRP54-202ENST00000546080 GTSCR1Q86UQ5 136 aa11.11□□□□□ -0.63
SRP54-202ENST00000546080 CEND1Q8N111 149 aa11.11□□□□□ -0.63
SRP54-202ENST00000546080 Q8TAT8 98 aa11.11□□□□□ -0.63
SRP54-202ENST00000546080 PHLDA1Q8WV24 401 aaPredicted RBP11.11□□□□□ -0.63
SRP54-202ENST00000546080 FOXC2Q99958 501 aa11.11□□□□□ -0.63
SRP54-202ENST00000546080 NXT2Q9NPJ8 142 aaKnown RBP11.11□□□□□ -0.63
SRP54-202ENST00000546080 PLCE1Q9P212 2302 aa11.11□□□□□ -0.63
SRP54-202ENST00000546080 LINC01546A6NGU7 62 aa11.1□□□□□ -0.63
SRP54-202ENST00000546080 FTH1P19P0C7X4 201 aa11.1□□□□□ -0.63
SRP54-202ENST00000546080 SCGB1A1P11684 91 aa11.1□□□□□ -0.63
SRP54-202ENST00000546080 AZU1P20160 251 aa11.1□□□□□ -0.63
SRP54-202ENST00000546080 EVI2AP22794 236 aa11.1□□□□□ -0.63
SRP54-202ENST00000546080 GTSF1LQ9H1H1 148 aa11.1□□□□□ -0.63
SRP54-202ENST00000546080 DYNLRB1Q9NP97 96 aa11.1□□□□□ -0.63
SRP54-202ENST00000546080 C16orf97H3BN30 126 aa11.1□□□□□ -0.63
SRP54-202ENST00000546080 ATP5LO75964 103 aa11.1□□□□□ -0.63
SRP54-202ENST00000546080 DPM2O94777 84 aa11.1□□□□□ -0.63
SRP54-202ENST00000546080 ZNF80P51504 273 aaPredicted RBP11.1□□□□□ -0.63
SRP54-202ENST00000546080 LINC01559Q495D7 138 aa11.1□□□□□ -0.63
SRP54-202ENST00000546080 SIGMAR1Q99720 223 aa11.1□□□□□ -0.63
SRP54-202ENST00000546080 RNF5Q99942 180 aa11.1□□□□□ -0.63
SRP54-202ENST00000546080 MSRB1Q9NZV6 116 aa11.1□□□□□ -0.63
SRP54-202ENST00000546080 GOSR1O95249 250 aa11.09□□□□□ -0.63
SRP54-202ENST00000546080 TNFRSF6BO95407 300 aa11.09□□□□□ -0.63
SRP54-202ENST00000546080 ORM1P02763 201 aa11.09□□□□□ -0.63
SRP54-202ENST00000546080 ZC2HC1BQ5TFG8 222 aa11.09□□□□□ -0.63
SRP54-202ENST00000546080 GFRALQ6UXV0 394 aa11.09□□□□□ -0.63
SRP54-202ENST00000546080 RNASE6Q93091 150 aaKnown RBP11.09□□□□□ -0.63
SRP54-202ENST00000546080 TM2D2Q9BX73 214 aa11.09□□□□□ -0.63
SRP54-202ENST00000546080 SMPXQ9UHP9 88 aa11.09□□□□□ -0.63
SRP54-202ENST00000546080 RALYQ9UKM9 306 aaKnown RBP11.09□□□□□ -0.63
SRP54-202ENST00000546080 SVILO95425 2214 aa11.09□□□□□ -0.63
SRP54-202ENST00000546080 VSTM5A8MXK1 200 aa11.09□□□□□ -0.63
SRP54-202ENST00000546080 GAS8-AS1O95177 125 aa11.09□□□□□ -0.63
SRP54-202ENST00000546080 KLF17Q5JT82 389 aaPredicted RBP11.09□□□□□ -0.63
SRP54-202ENST00000546080 ZNF318Q5VUA4 2279 aa11.08□□□□□ -0.64
SRP54-202ENST00000546080 F8W1H4 67 aa11.08□□□□□ -0.64
SRP54-202ENST00000546080 J3QR89 54 aa11.08□□□□□ -0.64
SRP54-202ENST00000546080 HLA-DRB4P13762 266 aa11.08□□□□□ -0.64
SRP54-202ENST00000546080 RPL7P18124 248 aaKnown RBP11.08□□□□□ -0.64
SRP54-202ENST00000546080 TMEM158Q8WZ71 300 aa11.08□□□□□ -0.64
SRP54-202ENST00000546080 TSSC4Q9Y5U2 329 aaPredicted RBP11.08□□□□□ -0.64
SRP54-202ENST00000546080 HLA-DRB4X5D2U9 266 aa11.08□□□□□ -0.64
SRP54-202ENST00000546080 SMG1Q96Q15 3661 aaKnown RBP11.07□□□□□ -0.64
SRP54-202ENST00000546080 TMEM8BA6NDV4 472 aa11.07□□□□□ -0.64
SRP54-202ENST00000546080 E9PLD3 99 aa11.07□□□□□ -0.64
SRP54-202ENST00000546080 MFAP4P55083 255 aa11.07□□□□□ -0.64
SRP54-202ENST00000546080 SRSF2Q01130 221 aaKnown RBP11.07□□□□□ -0.64
SRP54-202ENST00000546080 SMAGPQ0VAQ4 97 aa11.07□□□□□ -0.64
SRP54-202ENST00000546080 GPR179Q6PRD1 2367 aa11.07□□□□□ -0.64
SRP54-202ENST00000546080 IGLL5B9A064 214 aa11.07□□□□□ -0.64
SRP54-202ENST00000546080 ZNF207O43670 478 aaKnown RBP11.07□□□□□ -0.64
SRP54-202ENST00000546080 CD300EQ496F6 205 aaPredicted RBP11.07□□□□□ -0.64
SRP54-202ENST00000546080 FAM57AQ8TBR7 257 aa11.07□□□□□ -0.64
SRP54-202ENST00000546080 ZNF479Q96JC4 524 aa11.07□□□□□ -0.64
SRP54-202ENST00000546080 CNFNQ9BYD5 112 aa11.07□□□□□ -0.64
SRP54-202ENST00000546080 TMEM160Q9NX00 188 aa11.07□□□□□ -0.64
SRP54-202ENST00000546080 ASPMQ8IZT6 3477 aa11.07□□□□□ -0.64
SRP54-202ENST00000546080 K7EMI3 77 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 203.3 ms