RNA–Protein interactions for RNA: ENST00000543415.5

GTF2H3-213, Transcript of general transcription factor IIH subunit 3, humanhuman

TSL 5

Gene GTF2H3, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2H3-213ENST00000543415 SMIM6P0DI80 62 aa2.24□□□□□ -2.05
GTF2H3-213ENST00000543415 ZNF93P35789 620 aaPredicted RBP2.24□□□□□ -2.05
GTF2H3-213ENST00000543415 GNG4P50150 75 aa2.24□□□□□ -2.05
GTF2H3-213ENST00000543415 DSCR4P56555 118 aaPredicted RBP2.24□□□□□ -2.05
GTF2H3-213ENST00000543415 SNRPD3P62318 126 aaKnown RBP2.24□□□□□ -2.05
GTF2H3-213ENST00000543415 CLLU1Q5K131 121 aa2.24□□□□□ -2.05
GTF2H3-213ENST00000543415 GTF2H5Q6ZYL4 71 aa2.24□□□□□ -2.05
GTF2H3-213ENST00000543415 OR5AS1Q8N127 324 aa2.24□□□□□ -2.05
GTF2H3-213ENST00000543415 CLEC2BQ92478 149 aa2.24□□□□□ -2.05
GTF2H3-213ENST00000543415 TVP23CQ96ET8 276 aa2.24□□□□□ -2.05
GTF2H3-213ENST00000543415 ZC2HC1AQ96GY0 325 aa2.24□□□□□ -2.05
GTF2H3-213ENST00000543415 Q96M85 177 aa2.24□□□□□ -2.05
GTF2H3-213ENST00000543415 CIB3Q96Q77 187 aaPredicted RBP2.24□□□□□ -2.05
GTF2H3-213ENST00000543415 PLXND1Q9Y4D7 1925 aa2.24□□□□□ -2.05
GTF2H3-213ENST00000543415 ZNF106Q9H2Y7 1883 aaKnown RBP2.24□□□□□ -2.05
GTF2H3-213ENST00000543415 NACAE9PAV3 2078 aa2.23□□□□□ -2.05
GTF2H3-213ENST00000543415 COL27A1Q8IZC6 1860 aaPredicted RBP2.23□□□□□ -2.05
GTF2H3-213ENST00000543415 NUP210Q8TEM1 1887 aaPredicted RBP2.23□□□□□ -2.05
GTF2H3-213ENST00000543415 TCOF1Q13428 1488 aaKnown RBP2.23□□□□□ -2.05
GTF2H3-213ENST00000543415 TRBV20-1A0A075B6N2 111 aa2.23□□□□□ -2.05
GTF2H3-213ENST00000543415 IGHV1-24A0A0C4DH33 117 aa2.23□□□□□ -2.05
GTF2H3-213ENST00000543415 IFITM5A6NNB3 132 aa2.23□□□□□ -2.05
GTF2H3-213ENST00000543415 S100A8P05109 93 aa2.23□□□□□ -2.05
GTF2H3-213ENST00000543415 SLC25A4P12235 298 aa2.23□□□□□ -2.05
GTF2H3-213ENST00000543415 BRS3P32247 399 aa2.23□□□□□ -2.05
GTF2H3-213ENST00000543415 SS18Q15532 418 aa2.23□□□□□ -2.05
GTF2H3-213ENST00000543415 OCIAD2Q56VL3 154 aa2.23□□□□□ -2.05
GTF2H3-213ENST00000543415 IGFL1Q6UW32 110 aa2.23□□□□□ -2.05
GTF2H3-213ENST00000543415 ZNF436-AS1Q8NC38 126 aaPredicted RBP2.23□□□□□ -2.05
GTF2H3-213ENST00000543415 CCL26Q9Y258 94 aa2.23□□□□□ -2.05
GTF2H3-213ENST00000543415 COL16A1Q07092 1604 aaPredicted RBP2.23□□□□□ -2.05
GTF2H3-213ENST00000543415 TNS3Q68CZ2 1445 aa2.23□□□□□ -2.05
GTF2H3-213ENST00000543415 MYH10P35580 1976 aa2.23□□□□□ -2.05
GTF2H3-213ENST00000543415 BICRAQ9NZM4 1560 aa2.23□□□□□ -2.05
GTF2H3-213ENST00000543415 OBSL1O75147 1896 aa2.22□□□□□ -2.05
GTF2H3-213ENST00000543415 ZNF518AQ6AHZ1 1483 aa2.22□□□□□ -2.05
GTF2H3-213ENST00000543415 DOCK4Q8N1I0 1966 aa2.22□□□□□ -2.05
GTF2H3-213ENST00000543415 IGLV3-9A0A075B6K5 115 aa2.22□□□□□ -2.05
GTF2H3-213ENST00000543415 C3orf85A0A1B0GTC6 90 aa2.22□□□□□ -2.05
GTF2H3-213ENST00000543415 E7EUB6 86 aa2.22□□□□□ -2.05
GTF2H3-213ENST00000543415 CORTO00230 105 aa2.22□□□□□ -2.05
GTF2H3-213ENST00000543415 CLPSP04118 112 aa2.22□□□□□ -2.05
GTF2H3-213ENST00000543415 HIST1H1DP16402 221 aaKnown RBP2.22□□□□□ -2.05
GTF2H3-213ENST00000543415 RBP2P50120 134 aa2.22□□□□□ -2.05
GTF2H3-213ENST00000543415 MOBPQ13875 183 aa2.22□□□□□ -2.05
GTF2H3-213ENST00000543415 DIAPH2-AS1Q14236 149 aa2.22□□□□□ -2.05
GTF2H3-213ENST00000543415 CCSMST1Q4G0I0 132 aa2.22□□□□□ -2.05
GTF2H3-213ENST00000543415 MEIG1Q5JSS6 88 aa2.22□□□□□ -2.05
GTF2H3-213ENST00000543415 CASC2Q6XLA1 102 aa2.22□□□□□ -2.05
GTF2H3-213ENST00000543415 ARPINQ7Z6K5 226 aa2.22□□□□□ -2.05
GTF2H3-213ENST00000543415 GKN2Q86XP6 184 aa2.22□□□□□ -2.05
GTF2H3-213ENST00000543415 LINC00311Q8N616 119 aa2.22□□□□□ -2.05
GTF2H3-213ENST00000543415 PLPP5Q8NEB5 264 aa2.22□□□□□ -2.05
GTF2H3-213ENST00000543415 C20orf166-AS1Q96NR2 134 aa2.22□□□□□ -2.05
GTF2H3-213ENST00000543415 NAA60Q9H7X0 242 aa2.22□□□□□ -2.05
GTF2H3-213ENST00000543415 FKBP11Q9NYL4 201 aa2.22□□□□□ -2.05
GTF2H3-213ENST00000543415 PRG4Q92954 1404 aaPredicted RBP2.22□□□□□ -2.05
GTF2H3-213ENST00000543415 SMARCA2P51531 1590 aa2.22□□□□□ -2.05
GTF2H3-213ENST00000543415 KDM5BQ9UGL1 1544 aa2.22□□□□□ -2.05
GTF2H3-213ENST00000543415 UHRF1BP1LA0JNW5 1464 aa2.21□□□□□ -2.06
GTF2H3-213ENST00000543415 TRAV10A0A0B4J240 114 aa2.21□□□□□ -2.06
GTF2H3-213ENST00000543415 LOC107984156A0A0G2JMH3 177 aa2.21□□□□□ -2.06
GTF2H3-213ENST00000543415 IBA57-AS1B1ANH7 110 aa2.21□□□□□ -2.06
GTF2H3-213ENST00000543415 PGLYRP1O75594 196 aaPredicted RBP2.21□□□□□ -2.06
GTF2H3-213ENST00000543415 IGF2P01344 180 aa2.21□□□□□ -2.06
GTF2H3-213ENST00000543415 SSR2P43308 183 aa2.21□□□□□ -2.06
GTF2H3-213ENST00000543415 PPP3R1P63098 170 aa2.21□□□□□ -2.06
GTF2H3-213ENST00000543415 ARL17AQ8IVW1 177 aa2.21□□□□□ -2.06
GTF2H3-213ENST00000543415 CCL4L1Q8NHW4 92 aa2.21□□□□□ -2.06
GTF2H3-213ENST00000543415 PP6455Q8WZ26 134 aa2.21□□□□□ -2.06
GTF2H3-213ENST00000543415 SNRNP25Q9BV90 132 aaKnown RBP2.21□□□□□ -2.06
GTF2H3-213ENST00000543415 NIT2Q9NQR4 276 aa2.21□□□□□ -2.06
GTF2H3-213ENST00000543415 PRO0461Q9UI25 63 aa2.21□□□□□ -2.06
GTF2H3-213ENST00000543415 MPC1Q9Y5U8 109 aa2.21□□□□□ -2.06
GTF2H3-213ENST00000543415 TAF1LQ8IZX4 1826 aa2.21□□□□□ -2.06
GTF2H3-213ENST00000543415 RIMS1Q86UR5 1692 aaKnown RBP2.21□□□□□ -2.06
GTF2H3-213ENST00000543415 GRIN2AQ12879 1464 aa2.2□□□□□ -2.06
GTF2H3-213ENST00000543415 ZNF407Q9C0G0 2248 aa2.2□□□□□ -2.06
GTF2H3-213ENST00000543415 EDF1O60869 148 aaKnown RBP2.2□□□□□ -2.06
GTF2H3-213ENST00000543415 CXCL8P10145 99 aa2.2□□□□□ -2.06
GTF2H3-213ENST00000543415 CCL4P13236 92 aa2.2□□□□□ -2.06
GTF2H3-213ENST00000543415 TPPP2P59282 170 aa2.2□□□□□ -2.06
GTF2H3-213ENST00000543415 ROMO1P60602 79 aa2.2□□□□□ -2.06
GTF2H3-213ENST00000543415 C3orf62Q6ZUJ4 267 aa2.2□□□□□ -2.06
GTF2H3-213ENST00000543415 Q8IYB0 196 aa2.2□□□□□ -2.06
GTF2H3-213ENST00000543415 CLECL1Q8IZS7 167 aa2.2□□□□□ -2.06
GTF2H3-213ENST00000543415 C8orf59Q8N0T1 100 aaPredicted RBP2.2□□□□□ -2.06
GTF2H3-213ENST00000543415 ATP6V0E2Q8NHE4 81 aa2.2□□□□□ -2.06
GTF2H3-213ENST00000543415 PRO2289Q9P1D8 64 aa2.2□□□□□ -2.06
GTF2H3-213ENST00000543415 NOP16Q9Y3C1 178 aaKnown RBP2.2□□□□□ -2.06
GTF2H3-213ENST00000543415 DNAJC15Q9Y5T4 150 aa2.2□□□□□ -2.06
GTF2H3-213ENST00000543415 LHFPL6Q9Y693 200 aa2.2□□□□□ -2.06
GTF2H3-213ENST00000543415 FAM135BQ49AJ0 1406 aa2.19□□□□□ -2.06
GTF2H3-213ENST00000543415 NISCHQ9Y2I1 1504 aa2.19□□□□□ -2.06
GTF2H3-213ENST00000543415 TRAV12-2A0A075B6T6 113 aa2.19□□□□□ -2.06
GTF2H3-213ENST00000543415 TRAV12-1A0A0B4J245 112 aa2.19□□□□□ -2.06
GTF2H3-213ENST00000543415 TRGV4A0A0C4DH28 118 aa2.19□□□□□ -2.06
GTF2H3-213ENST00000543415 FAM236AA0A1B0GUQ0 79 aa2.19□□□□□ -2.06
GTF2H3-213ENST00000543415 FAM236BA0A1B0GV22 79 aa2.19□□□□□ -2.06
GTF2H3-213ENST00000543415 A6NIN4 97 aa2.19□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms