RNA–Protein interactions for RNA: ENST00000543002.5

RABGGTA-203, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 1,329 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-203ENST00000543002 C4BPBP20851 252 aa12.54□□□□□ -0.4
RABGGTA-203ENST00000543002 NUTF2P61970 127 aaKnown RBP12.54□□□□□ -0.4
RABGGTA-203ENST00000543002 ZNF726P1Q15940 193 aa12.54□□□□□ -0.4
RABGGTA-203ENST00000543002 OR4B1Q8NGF8 309 aa12.54□□□□□ -0.4
RABGGTA-203ENST00000543002 OR8A1Q8NGG7 326 aa12.54□□□□□ -0.4
RABGGTA-203ENST00000543002 PHYHIPLQ96FC7 376 aa12.54□□□□□ -0.4
RABGGTA-203ENST00000543002 AAMDCQ9H7C9 122 aa12.54□□□□□ -0.4
RABGGTA-203ENST00000543002 PLA2G2EQ9NZK7 142 aa12.54□□□□□ -0.4
RABGGTA-203ENST00000543002 CTXND1A0A1B0GTU2 59 aa12.53□□□□□ -0.4
RABGGTA-203ENST00000543002 UMAD1C9J7I0 102 aa12.53□□□□□ -0.4
RABGGTA-203ENST00000543002 IGKV3-20P01619 116 aa12.53□□□□□ -0.4
RABGGTA-203ENST00000543002 GIG44P09565 113 aaPredicted RBP12.53□□□□□ -0.4
RABGGTA-203ENST00000543002 ZNF705DP0CH99 300 aaPredicted RBP12.53□□□□□ -0.4
RABGGTA-203ENST00000543002 ZNF705BP0CI00 300 aaPredicted RBP12.53□□□□□ -0.4
RABGGTA-203ENST00000543002 CNN1P51911 297 aaKnown RBP12.53□□□□□ -0.4
RABGGTA-203ENST00000543002 SSX7Q7RTT5 188 aa12.53□□□□□ -0.4
RABGGTA-203ENST00000543002 SLC51BQ86UW2 128 aa12.53□□□□□ -0.4
RABGGTA-203ENST00000543002 LYPD1Q8N2G4 141 aa12.53□□□□□ -0.4
RABGGTA-203ENST00000543002 EXOC3-AS1Q8N2X6 119 aa12.53□□□□□ -0.4
RABGGTA-203ENST00000543002 RCHY1Q96PM5 261 aa12.53□□□□□ -0.4
RABGGTA-203ENST00000543002 RETNQ9HD89 108 aa12.53□□□□□ -0.4
RABGGTA-203ENST00000543002 TP53TG1Q9Y2A0 90 aa12.53□□□□□ -0.4
RABGGTA-203ENST00000543002 U3KQK5 164 aa12.53□□□□□ -0.4
RABGGTA-203ENST00000543002 M0R3E3 92 aa12.52□□□□□ -0.41
RABGGTA-203ENST00000543002 CXorf1O96002 111 aa12.52□□□□□ -0.41
RABGGTA-203ENST00000543002 GCHFRP30047 84 aa12.52□□□□□ -0.41
RABGGTA-203ENST00000543002 ICAM4Q14773 271 aa12.52□□□□□ -0.41
RABGGTA-203ENST00000543002 DEFB135Q30KP9 77 aa12.52□□□□□ -0.41
RABGGTA-203ENST00000543002 TMED6Q8WW62 240 aa12.52□□□□□ -0.41
RABGGTA-203ENST00000543002 OVOL2Q9BRP0 275 aa12.52□□□□□ -0.41
RABGGTA-203ENST00000543002 PRAC2D3DTV9 90 aa12.51□□□□□ -0.41
RABGGTA-203ENST00000543002 SPRY2O43597 315 aa12.51□□□□□ -0.41
RABGGTA-203ENST00000543002 RANP62826 216 aaKnown RBP12.51□□□□□ -0.41
RABGGTA-203ENST00000543002 HIST1H1AQ02539 215 aaPredicted RBP12.51□□□□□ -0.41
RABGGTA-203ENST00000543002 EIF5AL1Q6IS14 154 aaKnown RBP12.51□□□□□ -0.41
RABGGTA-203ENST00000543002 AMTNQ6UX39 209 aa12.51□□□□□ -0.41
RABGGTA-203ENST00000543002 SUN5Q8TC36 379 aa12.51□□□□□ -0.41
RABGGTA-203ENST00000543002 RNF183Q96D59 192 aa12.51□□□□□ -0.41
RABGGTA-203ENST00000543002 Q9H3A6 140 aa12.51□□□□□ -0.41
RABGGTA-203ENST00000543002 DNAH9Q9NYC9 4486 aa12.51□□□□□ -0.41
RABGGTA-203ENST00000543002 PRB4P10163 310 aaPredicted RBP12.5□□□□□ -0.41
RABGGTA-203ENST00000543002 OR10J6PQ8NGY7 276 aa12.5□□□□□ -0.41
RABGGTA-203ENST00000543002 C1QTNF4Q9BXJ3 329 aa12.5□□□□□ -0.41
RABGGTA-203ENST00000543002 TENM3Q9P273 2699 aa12.49□□□□□ -0.41
RABGGTA-203ENST00000543002 FHITP49789 147 aa12.49□□□□□ -0.41
RABGGTA-203ENST00000543002 NKX2-5P52952 324 aaPredicted RBP12.49□□□□□ -0.41
RABGGTA-203ENST00000543002 DPPA3Q6W0C5 159 aa12.49□□□□□ -0.41
RABGGTA-203ENST00000543002 SLC35B3Q9H1N7 401 aa12.49□□□□□ -0.41
RABGGTA-203ENST00000543002 OTORQ9NRC9 128 aa12.49□□□□□ -0.41
RABGGTA-203ENST00000543002 TMEM167BQ9NRX6 74 aa12.49□□□□□ -0.41
RABGGTA-203ENST00000543002 MAP1LC3B2A6NCE7 125 aa12.48□□□□□ -0.41
RABGGTA-203ENST00000543002 FXYD7P58549 80 aa12.48□□□□□ -0.41
RABGGTA-203ENST00000543002 CSNK1G2-AS1Q8NCQ2 148 aa12.48□□□□□ -0.41
RABGGTA-203ENST00000543002 FAM213BQ8TBF2 198 aa12.48□□□□□ -0.41
RABGGTA-203ENST00000543002 MAP1LC3BQ9GZQ8 125 aa12.48□□□□□ -0.41
RABGGTA-203ENST00000543002 XCL2Q9UBD3 114 aa12.48□□□□□ -0.41
RABGGTA-203ENST00000543002 PGPA6NDG6 321 aa12.47□□□□□ -0.41
RABGGTA-203ENST00000543002 NPIPB6E9PJ23 425 aa12.47□□□□□ -0.41
RABGGTA-203ENST00000543002 CSN1S1P47710 185 aa12.47□□□□□ -0.41
RABGGTA-203ENST00000543002 FGF8P55075 233 aaPredicted RBP12.47□□□□□ -0.41
RABGGTA-203ENST00000543002 FAM74A1Q5RGS3 127 aa12.47□□□□□ -0.41
RABGGTA-203ENST00000543002 IQCF2Q8IXL9 164 aa12.47□□□□□ -0.41
RABGGTA-203ENST00000543002 MBD3L1Q8WWY6 194 aa12.47□□□□□ -0.41
RABGGTA-203ENST00000543002 BOLA2-SMG1P6H3BVE0 249 aa12.46□□□□□ -0.41
RABGGTA-203ENST00000543002 AMBPP02760 352 aa12.46□□□□□ -0.41
RABGGTA-203ENST00000543002 RAB5CP51148 216 aa12.46□□□□□ -0.41
RABGGTA-203ENST00000543002 RXFP4Q8TDU9 374 aa12.46□□□□□ -0.41
RABGGTA-203ENST00000543002 TMPRSS5Q9H3S3 457 aa12.46□□□□□ -0.41
RABGGTA-203ENST00000543002 PPP1R14DQ9NXH3 145 aa12.46□□□□□ -0.41
RABGGTA-203ENST00000543002 SULT1A2P50226 295 aa12.45□□□□□ -0.42
RABGGTA-203ENST00000543002 SPINK13Q1W4C9 94 aa12.45□□□□□ -0.42
RABGGTA-203ENST00000543002 ARL6IP6Q8N6S5 226 aa12.45□□□□□ -0.42
RABGGTA-203ENST00000543002 RARRES2Q99969 163 aa12.45□□□□□ -0.42
RABGGTA-203ENST00000543002 STAB2Q8WWQ8 2551 aa12.45□□□□□ -0.42
RABGGTA-203ENST00000543002 IGKV2-40A0A087WW87 121 aaPredicted RBP12.44□□□□□ -0.42
RABGGTA-203ENST00000543002 A0A1W2PRE2 83 aa12.44□□□□□ -0.42
RABGGTA-203ENST00000543002 M0R2Z0 102 aa12.44□□□□□ -0.42
RABGGTA-203ENST00000543002 IGKV2D-40P01614 121 aaPredicted RBP12.44□□□□□ -0.42
RABGGTA-203ENST00000543002 CT45A10P0DMU9 189 aa12.44□□□□□ -0.42
RABGGTA-203ENST00000543002 ERCC8Q13216 396 aa12.44□□□□□ -0.42
RABGGTA-203ENST00000543002 C9orf47Q6ZRZ4 202 aa12.44□□□□□ -0.42
RABGGTA-203ENST00000543002 OR11H2Q8NH07 326 aa12.44□□□□□ -0.42
RABGGTA-203ENST00000543002 CMTM2Q8TAZ6 248 aa12.44□□□□□ -0.42
RABGGTA-203ENST00000543002 SFT2D1Q8WV19 159 aa12.44□□□□□ -0.42
RABGGTA-203ENST00000543002 IGF2BP2-AS1Q96M15 143 aa12.44□□□□□ -0.42
RABGGTA-203ENST00000543002 LINC00477Q96M19 166 aa12.44□□□□□ -0.42
RABGGTA-203ENST00000543002 ODF3Q96PU9 254 aa12.44□□□□□ -0.42
RABGGTA-203ENST00000543002 AGPAT4-IT1Q9H0P7 198 aa12.44□□□□□ -0.42
RABGGTA-203ENST00000543002 BOLA1Q9Y3E2 137 aa12.44□□□□□ -0.42
RABGGTA-203ENST00000543002 RBAKDNA6NC62 111 aa12.43□□□□□ -0.42
RABGGTA-203ENST00000543002 ZNF705EA8MWA4 302 aaPredicted RBP12.43□□□□□ -0.42
RABGGTA-203ENST00000543002 DIRC3C9JPN6 131 aa12.43□□□□□ -0.42
RABGGTA-203ENST00000543002 H2AFB1P0C5Y9 115 aa12.43□□□□□ -0.42
RABGGTA-203ENST00000543002 CRXO43186 299 aaPredicted RBP12.42□□□□□ -0.42
RABGGTA-203ENST00000543002 SLC25A5P05141 298 aaKnown RBP12.42□□□□□ -0.42
RABGGTA-203ENST00000543002 TSPOP30536 169 aa12.42□□□□□ -0.42
RABGGTA-203ENST00000543002 CDKN1BP46527 198 aa12.42□□□□□ -0.42
RABGGTA-203ENST00000543002 SUMO1P63165 101 aaKnown RBP12.42□□□□□ -0.42
RABGGTA-203ENST00000543002 C5orf17Q8NAS9 161 aa12.42□□□□□ -0.42
RABGGTA-203ENST00000543002 VGLL1Q99990 258 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms