RNA–Protein interactions for RNA: ENST00000539506.5

SFSWAP-208, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 3,149 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-208ENST00000539506 IGLC1P0CG04 106 aa9.9□□□□□ -0.82
SFSWAP-208ENST00000539506 RHOGP84095 191 aa9.9□□□□□ -0.82
SFSWAP-208ENST00000539506 TMEM97Q5BJF2 176 aa9.9□□□□□ -0.82
SFSWAP-208ENST00000539506 ATP5L2Q7Z4Y8 100 aa9.9□□□□□ -0.82
SFSWAP-208ENST00000539506 Q86TA4 180 aa9.89□□□□□ -0.83
SFSWAP-208ENST00000539506 C8orf46Q8TAG6 207 aa9.89□□□□□ -0.83
SFSWAP-208ENST00000539506 CHCHD1Q96BP2 118 aaKnown RBP9.89□□□□□ -0.83
SFSWAP-208ENST00000539506 ZNF747Q9BV97 191 aa9.89□□□□□ -0.83
SFSWAP-208ENST00000539506 CRXO43186 299 aaPredicted RBP9.89□□□□□ -0.83
SFSWAP-208ENST00000539506 PLGLAQ15195 96 aa9.89□□□□□ -0.83
SFSWAP-208ENST00000539506 C1RLQ9NZP8 487 aa9.89□□□□□ -0.83
SFSWAP-208ENST00000539506 A0A1B0GUT8 65 aa9.89□□□□□ -0.83
SFSWAP-208ENST00000539506 TIMM23O14925 209 aa9.89□□□□□ -0.83
SFSWAP-208ENST00000539506 GAS8-AS1O95177 125 aa9.89□□□□□ -0.83
SFSWAP-208ENST00000539506 PPIFP30405 207 aaKnown RBP9.89□□□□□ -0.83
SFSWAP-208ENST00000539506 CRIP1P50238 77 aa9.89□□□□□ -0.83
SFSWAP-208ENST00000539506 HIST1H1AQ02539 215 aaPredicted RBP9.89□□□□□ -0.83
SFSWAP-208ENST00000539506 PIP4P2Q8N4L2 257 aa9.89□□□□□ -0.83
SFSWAP-208ENST00000539506 RPEQ96AT9 228 aa9.89□□□□□ -0.83
SFSWAP-208ENST00000539506 CD5LO43866 347 aa9.88□□□□□ -0.83
SFSWAP-208ENST00000539506 IGKV1-17P01599 117 aa9.88□□□□□ -0.83
SFSWAP-208ENST00000539506 PLP1P60201 277 aa9.88□□□□□ -0.83
SFSWAP-208ENST00000539506 ONECUT1Q9UBC0 465 aa9.88□□□□□ -0.83
SFSWAP-208ENST00000539506 HSPB8Q9UJY1 196 aa9.88□□□□□ -0.83
SFSWAP-208ENST00000539506 HIGD1AQ9Y241 93 aa9.88□□□□□ -0.83
SFSWAP-208ENST00000539506 SPTAN1Q13813 2472 aaKnown RBP9.88□□□□□ -0.83
SFSWAP-208ENST00000539506 RBPJQ06330 500 aa9.88□□□□□ -0.83
SFSWAP-208ENST00000539506 MTURNQ8N3F0 131 aa9.88□□□□□ -0.83
SFSWAP-208ENST00000539506 TMEM75Q8N9X5 138 aa9.88□□□□□ -0.83
SFSWAP-208ENST00000539506 FMC1Q96HJ9 113 aa9.88□□□□□ -0.83
SFSWAP-208ENST00000539506 SLC25A39Q9BZJ4 359 aaPredicted RBP9.88□□□□□ -0.83
SFSWAP-208ENST00000539506 CELSR1Q9NYQ6 3014 aa9.87□□□□□ -0.83
SFSWAP-208ENST00000539506 IGLV2-11P01706 119 aa9.87□□□□□ -0.83
SFSWAP-208ENST00000539506 FCGR2BP31994 310 aaPredicted RBP9.87□□□□□ -0.83
SFSWAP-208ENST00000539506 PAX2Q02962 417 aa9.87□□□□□ -0.83
SFSWAP-208ENST00000539506 KLRD1Q13241 179 aa9.87□□□□□ -0.83
SFSWAP-208ENST00000539506 PET117Q6UWS5 81 aa9.87□□□□□ -0.83
SFSWAP-208ENST00000539506 LY6G5BQ8NDX9 201 aa9.87□□□□□ -0.83
SFSWAP-208ENST00000539506 STXBP6Q8NFX7 210 aa9.87□□□□□ -0.83
SFSWAP-208ENST00000539506 CSTL1Q9H114 145 aa9.87□□□□□ -0.83
SFSWAP-208ENST00000539506 DKK2Q9UBU2 259 aa9.87□□□□□ -0.83
SFSWAP-208ENST00000539506 PEF1Q9UBV8 284 aaKnown RBP9.87□□□□□ -0.83
SFSWAP-208ENST00000539506 K7EIM0 57 aa9.87□□□□□ -0.83
SFSWAP-208ENST00000539506 K7ERJ3 54 aa9.87□□□□□ -0.83
SFSWAP-208ENST00000539506 COX8AP10176 69 aa9.87□□□□□ -0.83
SFSWAP-208ENST00000539506 KIR3DS1Q14943 382 aa9.87□□□□□ -0.83
SFSWAP-208ENST00000539506 Q8TAT8 98 aa9.87□□□□□ -0.83
SFSWAP-208ENST00000539506 NDFIP1Q9BT67 221 aa9.87□□□□□ -0.83
SFSWAP-208ENST00000539506 RPL24P83731 157 aaKnown RBP9.87□□□□□ -0.83
SFSWAP-208ENST00000539506 LYZL1Q6UWQ5 148 aa9.87□□□□□ -0.83
SFSWAP-208ENST00000539506 SMIM15Q7Z3B0 74 aa9.87□□□□□ -0.83
SFSWAP-208ENST00000539506 FER1L6-AS1Q8NA97 138 aa9.87□□□□□ -0.83
SFSWAP-208ENST00000539506 SIGLEC8Q9NYZ4 499 aa9.87□□□□□ -0.83
SFSWAP-208ENST00000539506 A0A096LNJ9 63 aa9.86□□□□□ -0.83
SFSWAP-208ENST00000539506 MSRB1Q9NZV6 116 aa9.86□□□□□ -0.83
SFSWAP-208ENST00000539506 OVOL3O00110 214 aa9.86□□□□□ -0.83
SFSWAP-208ENST00000539506 NDUFS8O00217 210 aa9.86□□□□□ -0.83
SFSWAP-208ENST00000539506 CNIH1O95406 144 aa9.86□□□□□ -0.83
SFSWAP-208ENST00000539506 EVI2AP22794 236 aa9.86□□□□□ -0.83
SFSWAP-208ENST00000539506 LINC01545Q5VT33 79 aa9.86□□□□□ -0.83
SFSWAP-208ENST00000539506 CFHR4Q92496 578 aa9.86□□□□□ -0.83
SFSWAP-208ENST00000539506 CUBNO60494 3623 aa9.86□□□□□ -0.83
SFSWAP-208ENST00000539506 IGKV2-40A0A087WW87 121 aaPredicted RBP9.85□□□□□ -0.83
SFSWAP-208ENST00000539506 K7ERU9 68 aa9.85□□□□□ -0.83
SFSWAP-208ENST00000539506 CCL21O00585 134 aa9.85□□□□□ -0.83
SFSWAP-208ENST00000539506 IGKV2D-40P01614 121 aaPredicted RBP9.85□□□□□ -0.83
SFSWAP-208ENST00000539506 ADORA2A-AS1P86434 159 aa9.85□□□□□ -0.83
SFSWAP-208ENST00000539506 OR10AG1Q8NH19 301 aa9.85□□□□□ -0.83
SFSWAP-208ENST00000539506 RASL11BQ9BPW5 248 aa9.85□□□□□ -0.83
SFSWAP-208ENST00000539506 PPBPP02775 128 aa9.85□□□□□ -0.83
SFSWAP-208ENST00000539506 HLA-DMBP28068 263 aa9.85□□□□□ -0.83
SFSWAP-208ENST00000539506 FBXL19-AS1Q494R0 122 aa9.85□□□□□ -0.83
SFSWAP-208ENST00000539506 PSG8Q9UQ74 426 aa9.85□□□□□ -0.83
SFSWAP-208ENST00000539506 GCSHP23434 173 aa9.85□□□□□ -0.83
SFSWAP-208ENST00000539506 CSN1S1P47710 185 aa9.85□□□□□ -0.83
SFSWAP-208ENST00000539506 A0A0G2JLM5 398 aa9.84□□□□□ -0.83
SFSWAP-208ENST00000539506 NPIPB5A8MRT5 1133 aa9.84□□□□□ -0.83
SFSWAP-208ENST00000539506 IL4P05112 153 aa9.84□□□□□ -0.83
SFSWAP-208ENST00000539506 GATA1P15976 413 aaPredicted RBP9.84□□□□□ -0.83
SFSWAP-208ENST00000539506 LCNL1Q6ZST4 164 aa9.84□□□□□ -0.83
SFSWAP-208ENST00000539506 OR1N2Q8NGR9 330 aa9.84□□□□□ -0.83
SFSWAP-208ENST00000539506 PRELID3AQ96N28 172 aa9.84□□□□□ -0.83
SFSWAP-208ENST00000539506 HAX1O00165 279 aa9.84□□□□□ -0.83
SFSWAP-208ENST00000539506 DYNAPQ8N1N2 210 aa9.84□□□□□ -0.83
SFSWAP-208ENST00000539506 DEFB104AQ8WTQ1 72 aa9.84□□□□□ -0.83
SFSWAP-208ENST00000539506 IGHV3OR16-13A0A075B7E8 117 aa9.83□□□□□ -0.84
SFSWAP-208ENST00000539506 IGHV3-74A0A0B4J1X5 117 aa9.83□□□□□ -0.84
SFSWAP-208ENST00000539506 RIGQ13278 110 aa9.83□□□□□ -0.84
SFSWAP-208ENST00000539506 FAM162BQ5T6X4 162 aa9.83□□□□□ -0.84
SFSWAP-208ENST00000539506 S100A7AQ86SG5 101 aa9.83□□□□□ -0.84
SFSWAP-208ENST00000539506 GNG7O60262 68 aa9.83□□□□□ -0.84
SFSWAP-208ENST00000539506 TWIST1Q15672 202 aa9.83□□□□□ -0.84
SFSWAP-208ENST00000539506 WFDC12Q8WWY7 111 aa9.83□□□□□ -0.84
SFSWAP-208ENST00000539506 FGF6P10767 208 aa9.82□□□□□ -0.84
SFSWAP-208ENST00000539506 HOXB4P17483 251 aaPredicted RBP9.82□□□□□ -0.84
SFSWAP-208ENST00000539506 OR11H6Q8NGC7 330 aa9.82□□□□□ -0.84
SFSWAP-208ENST00000539506 SMIM12Q96EX1 92 aa9.82□□□□□ -0.84
SFSWAP-208ENST00000539506 TMEM14CQ9P0S9 112 aa9.82□□□□□ -0.84
SFSWAP-208ENST00000539506 RAXQ9Y2V3 346 aa9.82□□□□□ -0.84
SFSWAP-208ENST00000539506 A1L4Q6 167 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms