RNA–Protein interactions for RNA: ENST00000536666.1

LINC02398-201, Transcript of long intergenic non-protein coding RNA 2398, humanhuman

TSL 3 BASIC

Gene LINC02398, Length 431 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02398-201ENST00000536666 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.3□□□□□ -2.36
LINC02398-201ENST00000536666 CNTRLQ7Z7A1 2325 aa0.3□□□□□ -2.36
LINC02398-201ENST00000536666 PEAK1Q9H792 1746 aa0.3□□□□□ -2.36
LINC02398-201ENST00000536666 MIA2Q96PC5 1412 aa0.3□□□□□ -2.36
LINC02398-201ENST00000536666 YTHDC2Q9H6S0 1430 aaKnown RBP0.3□□□□□ -2.36
LINC02398-201ENST00000536666 CAMSAP2Q08AD1 1489 aa0.29□□□□□ -2.36
LINC02398-201ENST00000536666 SPAG17Q6Q759 2223 aa0.29□□□□□ -2.36
LINC02398-201ENST00000536666 ADGRB2O60241 1585 aa0.29□□□□□ -2.36
LINC02398-201ENST00000536666 MYH1P12882 1939 aa0.29□□□□□ -2.36
LINC02398-201ENST00000536666 TRPM1Q7Z4N2 1603 aa0.29□□□□□ -2.36
LINC02398-201ENST00000536666 IGLV3-32A0A0A0MS00 114 aa0.29□□□□□ -2.36
LINC02398-201ENST00000536666 TRBV6-7A0A0A0MS04 114 aa0.29□□□□□ -2.36
LINC02398-201ENST00000536666 TRBV6-8A0A0A6YYG3 113 aa0.29□□□□□ -2.36
LINC02398-201ENST00000536666 TRAV5A0A0B4J249 113 aa0.29□□□□□ -2.36
LINC02398-201ENST00000536666 TCRBV4S1A1TA0A5B7 111 aa0.29□□□□□ -2.36
LINC02398-201ENST00000536666 RIIAD1A6NNX1 92 aa0.29□□□□□ -2.36
LINC02398-201ENST00000536666 ZNF736B4DX44 427 aaPredicted RBP0.29□□□□□ -2.36
LINC02398-201ENST00000536666 TAX1BP3O14907 124 aa0.29□□□□□ -2.36
LINC02398-201ENST00000536666 INE1O15225 51 aa0.29□□□□□ -2.36
LINC02398-201ENST00000536666 CST8O60676 142 aa0.29□□□□□ -2.36
LINC02398-201ENST00000536666 PFDN1O60925 122 aa0.29□□□□□ -2.36
LINC02398-201ENST00000536666 BANF1O75531 89 aa0.29□□□□□ -2.36
LINC02398-201ENST00000536666 GADD45GO95257 159 aa0.29□□□□□ -2.36
LINC02398-201ENST00000536666 IFNA4P05014 189 aa0.29□□□□□ -2.36
LINC02398-201ENST00000536666 OR10J4P0C629 311 aa0.29□□□□□ -2.36
LINC02398-201ENST00000536666 HLA-EP13747 358 aa0.29□□□□□ -2.36
LINC02398-201ENST00000536666 NFYBP25208 207 aa0.29□□□□□ -2.36
LINC02398-201ENST00000536666 SRIP30626 198 aa0.29□□□□□ -2.36
LINC02398-201ENST00000536666 RNASE4P34096 147 aaKnown RBP0.29□□□□□ -2.36
LINC02398-201ENST00000536666 PPP1R2P41236 205 aa0.29□□□□□ -2.36
LINC02398-201ENST00000536666 SERPINB9P50453 376 aa0.29□□□□□ -2.36
LINC02398-201ENST00000536666 DYNLT1P63172 113 aa0.29□□□□□ -2.36
LINC02398-201ENST00000536666 GNG5P63218 68 aa0.29□□□□□ -2.36
LINC02398-201ENST00000536666 MPV17LQ2QL34 196 aa0.29□□□□□ -2.36
LINC02398-201ENST00000536666 RNASE10Q5GAN6 216 aaKnown RBP0.29□□□□□ -2.36
LINC02398-201ENST00000536666 C1orf137Q5JT78 98 aa0.29□□□□□ -2.36
LINC02398-201ENST00000536666 FAM74A1Q5RGS3 127 aa0.29□□□□□ -2.36
LINC02398-201ENST00000536666 GDF5OSQ5U4N7 250 aa0.29□□□□□ -2.36
LINC02398-201ENST00000536666 HACD4Q5VWC8 232 aa0.29□□□□□ -2.36
LINC02398-201ENST00000536666 TEX261Q6UWH6 196 aa0.29□□□□□ -2.36
LINC02398-201ENST00000536666 C4orf22Q6V702 233 aa0.29□□□□□ -2.36
LINC02398-201ENST00000536666 SOSTDC1Q6X4U4 206 aa0.29□□□□□ -2.36
LINC02398-201ENST00000536666 CROCCP2Q86T23 111 aa0.29□□□□□ -2.36
LINC02398-201ENST00000536666 PDZD9Q8IXQ8 264 aa0.29□□□□□ -2.36
LINC02398-201ENST00000536666 FAM19A2Q8N3H0 131 aa0.29□□□□□ -2.36
LINC02398-201ENST00000536666 Q8N814 137 aa0.29□□□□□ -2.36
LINC02398-201ENST00000536666 SREK1IP1Q8N9Q2 155 aaPredicted RBP0.29□□□□□ -2.36
LINC02398-201ENST00000536666 ST6GALNAC3Q8NDV1 305 aa0.29□□□□□ -2.36
LINC02398-201ENST00000536666 NUP35Q8NFH5 326 aa0.29□□□□□ -2.36
LINC02398-201ENST00000536666 OR52R1Q8NGF1 315 aa0.29□□□□□ -2.36
LINC02398-201ENST00000536666 OR2T35Q8NGX2 323 aa0.29□□□□□ -2.36
LINC02398-201ENST00000536666 ZHX1-C8orf76Q96EF9 292 aa0.29□□□□□ -2.36
LINC02398-201ENST00000536666 ODF3Q96PU9 254 aa0.29□□□□□ -2.36
LINC02398-201ENST00000536666 TP53RKQ96S44 253 aa0.29□□□□□ -2.36
LINC02398-201ENST00000536666 PRRT1Q99946 306 aa0.29□□□□□ -2.36
LINC02398-201ENST00000536666 GINS3Q9BRX5 216 aa0.29□□□□□ -2.36
LINC02398-201ENST00000536666 CCDC94Q9BW85 323 aaPredicted RBP0.29□□□□□ -2.36
LINC02398-201ENST00000536666 RTL8AQ9BWD3 113 aa0.29□□□□□ -2.36
LINC02398-201ENST00000536666 NPCDR1Q9BY65 106 aa0.29□□□□□ -2.36
LINC02398-201ENST00000536666 OR2J1Q9GZK6 312 aa0.29□□□□□ -2.36
LINC02398-201ENST00000536666 TMEM126AQ9H061 195 aa0.29□□□□□ -2.36
LINC02398-201ENST00000536666 BOLA2Q9H3K6 86 aa0.29□□□□□ -2.36
LINC02398-201ENST00000536666 BIN3Q9NQY0 253 aa0.29□□□□□ -2.36
LINC02398-201ENST00000536666 U3KQ87 197 aa0.29□□□□□ -2.36
LINC02398-201ENST00000536666 VPS13AQ96RL7 3174 aa0.29□□□□□ -2.36
LINC02398-201ENST00000536666 CHD9Q3L8U1 2897 aa0.29□□□□□ -2.36
LINC02398-201ENST00000536666 DMXL1Q9Y485 3027 aa0.29□□□□□ -2.36
LINC02398-201ENST00000536666 NISCHQ9Y2I1 1504 aa0.28□□□□□ -2.36
LINC02398-201ENST00000536666 SYNMO15061 1565 aa0.28□□□□□ -2.36
LINC02398-201ENST00000536666 DCHS2Q6V1P9 2916 aa0.28□□□□□ -2.36
LINC02398-201ENST00000536666 KMT2AQ03164 3969 aa0.28□□□□□ -2.36
LINC02398-201ENST00000536666 LAMA5O15230 3695 aa0.28□□□□□ -2.36
LINC02398-201ENST00000536666 RBBP6Q7Z6E9 1792 aaKnown RBP0.28□□□□□ -2.36
LINC02398-201ENST00000536666 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.28□□□□□ -2.36
LINC02398-201ENST00000536666 A0A087WSZ3 146 aa0.28□□□□□ -2.36
LINC02398-201ENST00000536666 TRAV3A0A0B4J244 114 aa0.28□□□□□ -2.36
LINC02398-201ENST00000536666 TLCD2A6NGC4 264 aa0.28□□□□□ -2.36
LINC02398-201ENST00000536666 CCDC160A6NGH7 325 aa0.28□□□□□ -2.36
LINC02398-201ENST00000536666 PPP5D1E7EU14 171 aa0.28□□□□□ -2.36
LINC02398-201ENST00000536666 E7EUB6 86 aa0.28□□□□□ -2.36
LINC02398-201ENST00000536666 TMEM256-PLSCR3K7ERE1 68 aa0.28□□□□□ -2.36
LINC02398-201ENST00000536666 GPR31O00270 319 aa0.28□□□□□ -2.36
LINC02398-201ENST00000536666 CCL16O15467 120 aa0.28□□□□□ -2.36
LINC02398-201ENST00000536666 LYRM1O43325 122 aa0.28□□□□□ -2.36
LINC02398-201ENST00000536666 HIST1H2BKO60814 126 aa0.28□□□□□ -2.36
LINC02398-201ENST00000536666 ERC2-IT1O76042 136 aa0.28□□□□□ -2.36
LINC02398-201ENST00000536666 TRGC2P03986 189 aa0.28□□□□□ -2.36
LINC02398-201ENST00000536666 HIST1H2BJP06899 126 aa0.28□□□□□ -2.36
LINC02398-201ENST00000536666 OGNP20774 298 aaKnown RBP0.28□□□□□ -2.36
LINC02398-201ENST00000536666 SERPINB1P30740 379 aa0.28□□□□□ -2.36
LINC02398-201ENST00000536666 S100A5P33763 92 aa0.28□□□□□ -2.36
LINC02398-201ENST00000536666 ZNF93P35789 620 aaPredicted RBP0.28□□□□□ -2.36
LINC02398-201ENST00000536666 RAB5CP51148 216 aa0.28□□□□□ -2.36
LINC02398-201ENST00000536666 DYNLT3P51808 116 aa0.28□□□□□ -2.36
LINC02398-201ENST00000536666 DSCR4P56555 118 aaPredicted RBP0.28□□□□□ -2.36
LINC02398-201ENST00000536666 DEFA3P59666 94 aa0.28□□□□□ -2.36
LINC02398-201ENST00000536666 VBP1P61758 197 aa0.28□□□□□ -2.36
LINC02398-201ENST00000536666 CNBPP62633 177 aaKnown RBP0.28□□□□□ -2.36
LINC02398-201ENST00000536666 CDK6Q00534 326 aa0.28□□□□□ -2.36
LINC02398-201ENST00000536666 DEFB113Q30KQ7 82 aa0.28□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms