RNA–Protein interactions for RNA: ENST00000534765.1

SF3B2-216, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-216ENST00000534765 CHAC1Q9BUX1 264 aa7.25□□□□□ -1.25
SF3B2-216ENST00000534765 PPDPFQ9H3Y8 114 aa7.25□□□□□ -1.25
SF3B2-216ENST00000534765 TMEM160Q9NX00 188 aa7.25□□□□□ -1.25
SF3B2-216ENST00000534765 GNG12Q9UBI6 72 aa7.25□□□□□ -1.25
SF3B2-216ENST00000534765 MXRA5Q9NR99 2828 aa7.25□□□□□ -1.25
SF3B2-216ENST00000534765 C17orf98A8MV24 154 aa7.25□□□□□ -1.25
SF3B2-216ENST00000534765 CCL21O00585 134 aa7.25□□□□□ -1.25
SF3B2-216ENST00000534765 IL4P05112 153 aa7.25□□□□□ -1.25
SF3B2-216ENST00000534765 LYPD2Q6UXB3 125 aa7.25□□□□□ -1.25
SF3B2-216ENST00000534765 GPR82Q96P67 336 aa7.25□□□□□ -1.25
SF3B2-216ENST00000534765 VCX2Q9H322 139 aa7.25□□□□□ -1.25
SF3B2-216ENST00000534765 WDR83OSQ9Y284 106 aa7.25□□□□□ -1.25
SF3B2-216ENST00000534765 MZT1Q08AG7 82 aa7.25□□□□□ -1.25
SF3B2-216ENST00000534765 FAM90A10PA6NDY2 464 aa7.24□□□□□ -1.25
SF3B2-216ENST00000534765 FAM90A18PA6NE21 464 aa7.24□□□□□ -1.25
SF3B2-216ENST00000534765 FAM90A16PA6NEW6 464 aa7.24□□□□□ -1.25
SF3B2-216ENST00000534765 FAM90A20PA6NIJ5 464 aa7.24□□□□□ -1.25
SF3B2-216ENST00000534765 FAM90A8PA6NJQ4 464 aa7.24□□□□□ -1.25
SF3B2-216ENST00000534765 FAM90A7PA6NKC0 464 aa7.24□□□□□ -1.25
SF3B2-216ENST00000534765 FAM90A22PA8MWA6 464 aa7.24□□□□□ -1.25
SF3B2-216ENST00000534765 FAM90A12PA8MX19 464 aa7.24□□□□□ -1.25
SF3B2-216ENST00000534765 FAM90A5PA8MXJ8 464 aa7.24□□□□□ -1.25
SF3B2-216ENST00000534765 FAM90A23PA8MXZ1 464 aa7.24□□□□□ -1.25
SF3B2-216ENST00000534765 FAM90A15PP0C7V4 464 aa7.24□□□□□ -1.25
SF3B2-216ENST00000534765 FAM90A13PP0C7W8 464 aa7.24□□□□□ -1.25
SF3B2-216ENST00000534765 FAM90A14PP0C7W9 464 aa7.24□□□□□ -1.25
SF3B2-216ENST00000534765 FAM90A24PP0C7X0 464 aa7.24□□□□□ -1.25
SF3B2-216ENST00000534765 EIF4EBP1Q13541 118 aaPredicted RBP7.24□□□□□ -1.25
SF3B2-216ENST00000534765 ZNF585BQ52M93 769 aa7.24□□□□□ -1.25
SF3B2-216ENST00000534765 GDF5OSQ5U4N7 250 aa7.24□□□□□ -1.25
SF3B2-216ENST00000534765 SP5Q6BEB4 398 aaPredicted RBP7.24□□□□□ -1.25
SF3B2-216ENST00000534765 FAM159AQ6UWV7 190 aa7.24□□□□□ -1.25
SF3B2-216ENST00000534765 GRAMD2BQ96HH9 432 aa7.24□□□□□ -1.25
SF3B2-216ENST00000534765 FAM110AQ9BQ89 295 aa7.24□□□□□ -1.25
SF3B2-216ENST00000534765 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.24□□□□□ -1.25
SF3B2-216ENST00000534765 C9JCJ5 164 aa7.24□□□□□ -1.25
SF3B2-216ENST00000534765 TREML4Q6UXN2 200 aa7.24□□□□□ -1.25
SF3B2-216ENST00000534765 SCGB1D4Q6XE38 83 aa7.24□□□□□ -1.25
SF3B2-216ENST00000534765 MGST2Q99735 147 aa7.24□□□□□ -1.25
SF3B2-216ENST00000534765 ASCL2Q99929 193 aa7.24□□□□□ -1.25
SF3B2-216ENST00000534765 SPATA25Q9BR10 227 aa7.24□□□□□ -1.25
SF3B2-216ENST00000534765 PRDX2P32119 198 aa7.24□□□□□ -1.25
SF3B2-216ENST00000534765 TTC9CQ8N5M4 171 aa7.24□□□□□ -1.25
SF3B2-216ENST00000534765 DDB2Q92466 427 aa7.24□□□□□ -1.25
SF3B2-216ENST00000534765 RND1Q92730 232 aa7.24□□□□□ -1.25
SF3B2-216ENST00000534765 VKORC1Q9BQB6 163 aa7.24□□□□□ -1.25
SF3B2-216ENST00000534765 NGBQ9NPG2 151 aa7.24□□□□□ -1.25
SF3B2-216ENST00000534765 TRBV6-6A0A0A6YYG2 114 aa7.23□□□□□ -1.25
SF3B2-216ENST00000534765 LINC00473A8K010 186 aa7.23□□□□□ -1.25
SF3B2-216ENST00000534765 COX7A2P2O60397 106 aa7.23□□□□□ -1.25
SF3B2-216ENST00000534765 PYYP10082 97 aa7.23□□□□□ -1.25
SF3B2-216ENST00000534765 Q1RN00 199 aa7.23□□□□□ -1.25
SF3B2-216ENST00000534765 OR1L8Q8NGR8 309 aa7.23□□□□□ -1.25
SF3B2-216ENST00000534765 CHCHD1Q96BP2 118 aaKnown RBP7.23□□□□□ -1.25
SF3B2-216ENST00000534765 CCL13Q99616 98 aa7.23□□□□□ -1.25
SF3B2-216ENST00000534765 B9A039 149 aa7.23□□□□□ -1.25
SF3B2-216ENST00000534765 APELAP0DMC3 54 aa7.23□□□□□ -1.25
SF3B2-216ENST00000534765 KLRB1Q12918 225 aa7.23□□□□□ -1.25
SF3B2-216ENST00000534765 Q8TCH9 128 aa7.23□□□□□ -1.25
SF3B2-216ENST00000534765 FOXI1Q12951 378 aa7.23□□□□□ -1.25
SF3B2-216ENST00000534765 OR1L4Q8NGR5 311 aa7.23□□□□□ -1.25
SF3B2-216ENST00000534765 GAFA1Q96PS6 74 aa7.23□□□□□ -1.25
SF3B2-216ENST00000534765 CTSZQ9UBR2 303 aa7.23□□□□□ -1.25
SF3B2-216ENST00000534765 APCP25054 2843 aa7.23□□□□□ -1.25
SF3B2-216ENST00000534765 PLXNB1O43157 2135 aa7.23□□□□□ -1.25
SF3B2-216ENST00000534765 TSPAN13O95857 204 aa7.22□□□□□ -1.25
SF3B2-216ENST00000534765 LOXL3P58215 753 aa7.22□□□□□ -1.25
SF3B2-216ENST00000534765 C17orf58Q2M2W7 97 aa7.22□□□□□ -1.25
SF3B2-216ENST00000534765 KMT2BQ9UMN6 2715 aaPredicted RBP7.22□□□□□ -1.25
SF3B2-216ENST00000534765 BRI3O95415 125 aa7.22□□□□□ -1.25
SF3B2-216ENST00000534765 LTAP01374 205 aa7.22□□□□□ -1.25
SF3B2-216ENST00000534765 CRYGCP07315 174 aa7.22□□□□□ -1.25
SF3B2-216ENST00000534765 HES1Q14469 280 aa7.22□□□□□ -1.25
SF3B2-216ENST00000534765 C10orf126Q8N4M7 172 aa7.22□□□□□ -1.25
SF3B2-216ENST00000534765 BEX4Q9NWD9 120 aaPredicted RBP7.22□□□□□ -1.25
SF3B2-216ENST00000534765 IGLL5B9A064 214 aa7.22□□□□□ -1.25
SF3B2-216ENST00000534765 SPINT2O43291 252 aa7.22□□□□□ -1.25
SF3B2-216ENST00000534765 NDUFS7O75251 213 aa7.22□□□□□ -1.25
SF3B2-216ENST00000534765 ORM2P19652 201 aa7.22□□□□□ -1.25
SF3B2-216ENST00000534765 GNLYP22749 145 aa7.22□□□□□ -1.25
SF3B2-216ENST00000534765 KLF17Q5JT82 389 aaPredicted RBP7.22□□□□□ -1.25
SF3B2-216ENST00000534765 FOXI2Q6ZQN5 318 aa7.22□□□□□ -1.25
SF3B2-216ENST00000534765 NUP37Q8NFH4 326 aa7.22□□□□□ -1.25
SF3B2-216ENST00000534765 MAP1LC3AQ9H492 121 aa7.22□□□□□ -1.25
SF3B2-216ENST00000534765 POLDIP2Q9Y2S7 368 aa7.22□□□□□ -1.25
SF3B2-216ENST00000534765 PGPA6NDG6 321 aa7.21□□□□□ -1.25
SF3B2-216ENST00000534765 FAM90A26D6RGX4 464 aa7.21□□□□□ -1.25
SF3B2-216ENST00000534765 CGB3P0DN86 165 aa7.21□□□□□ -1.25
SF3B2-216ENST00000534765 CGB7P0DN87 165 aa7.21□□□□□ -1.25
SF3B2-216ENST00000534765 IFITM1P13164 125 aa7.21□□□□□ -1.25
SF3B2-216ENST00000534765 IFI27P40305 119 aaPredicted RBP7.21□□□□□ -1.25
SF3B2-216ENST00000534765 TNFAIP6P98066 277 aaPredicted RBP7.21□□□□□ -1.25
SF3B2-216ENST00000534765 PIMREGQ9BSJ6 248 aa7.21□□□□□ -1.25
SF3B2-216ENST00000534765 DIAPH2-AS1Q14236 149 aa7.21□□□□□ -1.26
SF3B2-216ENST00000534765 PRR7Q8TB68 274 aa7.21□□□□□ -1.26
SF3B2-216ENST00000534765 SRSF12Q8WXF0 261 aaKnown RBP7.21□□□□□ -1.26
SF3B2-216ENST00000534765 NPIPB3Q92617 1050 aa7.21□□□□□ -1.26
SF3B2-216ENST00000534765 FOXC2Q99958 501 aa7.21□□□□□ -1.26
SF3B2-216ENST00000534765 DKK2Q9UBU2 259 aa7.21□□□□□ -1.26
SF3B2-216ENST00000534765 LRRK2Q5S007 2527 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms