RNA–Protein interactions for RNA: ENST00000534532.6

NCAPD3-213, Transcript of non-SMC condensin II complex subunit D3, human

TSL 2

Gene NCAPD3, Length 5,539 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NCAPD3-213	ENST00000534532	TMEM238	C9JI98	176 aa		12.59	□□□□□ -0.39
NCAPD3-213	ENST00000534532	IGHV4-30-2	A0A087WSY4	118 aa		12.59	□□□□□ -0.39
NCAPD3-213	ENST00000534532	TSPAN13	O95857	204 aa		12.59	□□□□□ -0.39
NCAPD3-213	ENST00000534532	DAZAP2	Q15038	168 aa	Predicted RBP	12.59	□□□□□ -0.39
NCAPD3-213	ENST00000534532		Q86TA4	180 aa		12.59	□□□□□ -0.39
NCAPD3-213	ENST00000534532	CFHR3	Q02985	330 aa		12.58	□□□□□ -0.39
NCAPD3-213	ENST00000534532	AZU1	P20160	251 aa		12.58	□□□□□ -0.4
NCAPD3-213	ENST00000534532	LINC01551	Q86U37	167 aa		12.58	□□□□□ -0.4
NCAPD3-213	ENST00000534532	IGHV1OR15-1	A0A075B7D0	117 aa		12.58	□□□□□ -0.4
NCAPD3-213	ENST00000534532	GAGE12J	A6NER3	117 aa		12.58	□□□□□ -0.4
NCAPD3-213	ENST00000534532	SSBP2	P81877	361 aa	Predicted RBP	12.58	□□□□□ -0.4
NCAPD3-213	ENST00000534532	GAGE1	Q13065	139 aa		12.58	□□□□□ -0.4
NCAPD3-213	ENST00000534532	GAGE4	Q13068	117 aa		12.58	□□□□□ -0.4
NCAPD3-213	ENST00000534532	GAGE5	Q13069	117 aa		12.58	□□□□□ -0.4
NCAPD3-213	ENST00000534532	GAGE13	Q4V321	117 aa		12.58	□□□□□ -0.4
NCAPD3-213	ENST00000534532	CDKN1B	P46527	198 aa		12.58	□□□□□ -0.4
NCAPD3-213	ENST00000534532	FAM120AOS	Q5T036	256 aa		12.58	□□□□□ -0.4
NCAPD3-213	ENST00000534532	ZGRF1	Q86YA3	2104 aa		12.58	□□□□□ -0.4
NCAPD3-213	ENST00000534532	KNCN	A6PVL3	124 aa		12.57	□□□□□ -0.4
NCAPD3-213	ENST00000534532	HOXB4	P17483	251 aa	Predicted RBP	12.57	□□□□□ -0.4
NCAPD3-213	ENST00000534532	TTC32	Q5I0X7	151 aa		12.57	□□□□□ -0.4
NCAPD3-213	ENST00000534532	HAPLN4	Q86UW8	402 aa		12.57	□□□□□ -0.4
NCAPD3-213	ENST00000534532	TMEM242	Q9NWH2	141 aa		12.57	□□□□□ -0.4
NCAPD3-213	ENST00000534532	GAGE12B	A1L429	117 aa		12.57	□□□□□ -0.4
NCAPD3-213	ENST00000534532		A8MWV9	139 aa		12.57	□□□□□ -0.4
NCAPD3-213	ENST00000534532	ZNF561-AS1	K7EIQ3	104 aa		12.57	□□□□□ -0.4
NCAPD3-213	ENST00000534532	GAGE7	O76087	117 aa		12.57	□□□□□ -0.4
NCAPD3-213	ENST00000534532	GAGE12F	P0CL80	117 aa		12.57	□□□□□ -0.4
NCAPD3-213	ENST00000534532	GAGE12G	P0CL81	117 aa		12.57	□□□□□ -0.4
NCAPD3-213	ENST00000534532	GAGE12I	P0CL82	117 aa		12.57	□□□□□ -0.4
NCAPD3-213	ENST00000534532	GGTLC3	B5MD39	225 aa		12.57	□□□□□ -0.4
NCAPD3-213	ENST00000534532	ADORA2A-AS1	P86434	159 aa		12.57	□□□□□ -0.4
NCAPD3-213	ENST00000534532	MRAP	Q8TCY5	172 aa		12.57	□□□□□ -0.4
NCAPD3-213	ENST00000534532	C8orf86	Q6ZUL3	223 aa		12.57	□□□□□ -0.4
NCAPD3-213	ENST00000534532	TRBV25-1	A0A075B6N4	114 aa		12.57	□□□□□ -0.4
NCAPD3-213	ENST00000534532		F8WEM9	126 aa		12.57	□□□□□ -0.4
NCAPD3-213	ENST00000534532	CCL24	O00175	119 aa		12.57	□□□□□ -0.4
NCAPD3-213	ENST00000534532	IGHV7-4-1	A0A0J9YVY3	117 aa		12.56	□□□□□ -0.4
NCAPD3-213	ENST00000534532		A0A1B0GWB2	263 aa		12.56	□□□□□ -0.4
NCAPD3-213	ENST00000534532	C9orf66	Q5T8R8	295 aa		12.56	□□□□□ -0.4
NCAPD3-213	ENST00000534532	CYTL1	Q9NRR1	136 aa		12.56	□□□□□ -0.4
NCAPD3-213	ENST00000534532	MED13L	Q71F56	2210 aa		12.56	□□□□□ -0.4
NCAPD3-213	ENST00000534532	FANCM	Q8IYD8	2048 aa		12.56	□□□□□ -0.4
NCAPD3-213	ENST00000534532		A0A1B0GW64	132 aa		12.56	□□□□□ -0.4
NCAPD3-213	ENST00000534532	C15orf65	H3BRN8	121 aa		12.56	□□□□□ -0.4
NCAPD3-213	ENST00000534532	CDK2AP2	O75956	126 aa		12.56	□□□□□ -0.4
NCAPD3-213	ENST00000534532	IGHV4-39	P01824	125 aa		12.56	□□□□□ -0.4
NCAPD3-213	ENST00000534532	CFP	P27918	469 aa		12.56	□□□□□ -0.4
NCAPD3-213	ENST00000534532	DEFB104A	Q8WTQ1	72 aa		12.56	□□□□□ -0.4
NCAPD3-213	ENST00000534532	DERL1	Q9BUN8	251 aa		12.56	□□□□□ -0.4
NCAPD3-213	ENST00000534532	DMRT1	Q9Y5R6	373 aa		12.56	□□□□□ -0.4
NCAPD3-213	ENST00000534532	GTF3C1	Q12789	2109 aa		12.56	□□□□□ -0.4
NCAPD3-213	ENST00000534532	PFN1	P07737	140 aa	Known RBP	12.56	□□□□□ -0.4
NCAPD3-213	ENST00000534532	LY6G5B	Q8NDX9	201 aa		12.56	□□□□□ -0.4
NCAPD3-213	ENST00000534532	KLK9	Q9UKQ9	250 aa		12.56	□□□□□ -0.4
NCAPD3-213	ENST00000534532	PAX9	P55771	341 aa		12.55	□□□□□ -0.4
NCAPD3-213	ENST00000534532	C10orf105	Q8TEF2	133 aa		12.55	□□□□□ -0.4
NCAPD3-213	ENST00000534532	WDR81	Q562E7	1941 aa		12.55	□□□□□ -0.4
NCAPD3-213	ENST00000534532	SRSF3	P84103	164 aa	Known RBP	12.55	□□□□□ -0.4
NCAPD3-213	ENST00000534532	TMEM75	Q8N9X5	138 aa		12.55	□□□□□ -0.4
NCAPD3-213	ENST00000534532	MMP23A	O75900	390 aa		12.55	□□□□□ -0.4
NCAPD3-213	ENST00000534532	C8orf31	Q8N9H6	132 aa		12.55	□□□□□ -0.4
NCAPD3-213	ENST00000534532	YLPM1	P49750	1951 aa	Known RBP	12.55	□□□□□ -0.4
NCAPD3-213	ENST00000534532	LAMTOR2	Q9Y2Q5	125 aa		12.55	□□□□□ -0.4
NCAPD3-213	ENST00000534532	SLA	Q13239	276 aa		12.54	□□□□□ -0.4
NCAPD3-213	ENST00000534532	NUP35	Q8NFH5	326 aa		12.54	□□□□□ -0.4
NCAPD3-213	ENST00000534532		M0R2P5	195 aa		12.54	□□□□□ -0.4
NCAPD3-213	ENST00000534532	OR2K2	Q8NGT1	345 aa		12.54	□□□□□ -0.4
NCAPD3-213	ENST00000534532	TRBV19	A0A075B6N1	114 aa		12.54	□□□□□ -0.4
NCAPD3-213	ENST00000534532	ANKHD1-EIF4EBP3	H7C0V5	636 aa	Predicted RBP	12.54	□□□□□ -0.4
NCAPD3-213	ENST00000534532	LGALS1	P09382	135 aa	Known RBP	12.54	□□□□□ -0.4
NCAPD3-213	ENST00000534532	CGB3	P0DN86	165 aa		12.54	□□□□□ -0.4
NCAPD3-213	ENST00000534532	C10orf126	Q8N4M7	172 aa		12.54	□□□□□ -0.4
NCAPD3-213	ENST00000534532	NHP2	Q9NX24	153 aa	Known RBP	12.54	□□□□□ -0.4
NCAPD3-213	ENST00000534532	MALRD1	Q5VYJ5	2156 aa		12.53	□□□□□ -0.4
NCAPD3-213	ENST00000534532	TYMS	P04818	313 aa		12.53	□□□□□ -0.4
NCAPD3-213	ENST00000534532	TMEM158	Q8WZ71	300 aa		12.53	□□□□□ -0.4
NCAPD3-213	ENST00000534532	C5orf30	Q96GV9	206 aa		12.53	□□□□□ -0.4
NCAPD3-213	ENST00000534532	CTSZ	Q9UBR2	303 aa		12.53	□□□□□ -0.4
NCAPD3-213	ENST00000534532	DKK4	Q9UBT3	224 aa		12.53	□□□□□ -0.4
NCAPD3-213	ENST00000534532	MYMX	A0A1B0GTQ4	84 aa		12.53	□□□□□ -0.4
NCAPD3-213	ENST00000534532	RSPO1	Q2MKA7	263 aa	Predicted RBP	12.53	□□□□□ -0.4
NCAPD3-213	ENST00000534532	ATP6V0B	Q99437	205 aa		12.53	□□□□□ -0.4
NCAPD3-213	ENST00000534532	TRBV24-1	A0A075B6N3	115 aa		12.53	□□□□□ -0.4
NCAPD3-213	ENST00000534532	ZNF524	Q96C55	264 aa		12.53	□□□□□ -0.4
NCAPD3-213	ENST00000534532	TRAV16	A0A0A6YYK6	109 aa	Predicted RBP	12.52	□□□□□ -0.4
NCAPD3-213	ENST00000534532	TPSG1	Q9NRR2	321 aa		12.52	□□□□□ -0.4
NCAPD3-213	ENST00000534532	IGHV3-16	A0A0C4DH30	117 aa		12.52	□□□□□ -0.41
NCAPD3-213	ENST00000534532	WT1-AS	Q06250	92 aa		12.52	□□□□□ -0.41
NCAPD3-213	ENST00000534532	FOXE3	Q13461	319 aa		12.52	□□□□□ -0.41
NCAPD3-213	ENST00000534532	OR11H6	Q8NGC7	330 aa		12.52	□□□□□ -0.41
NCAPD3-213	ENST00000534532	FRMPD3	Q5JV73	1810 aa		12.52	□□□□□ -0.41
NCAPD3-213	ENST00000534532	HOXD3	P31249	432 aa	Predicted RBP	12.52	□□□□□ -0.41
NCAPD3-213	ENST00000534532	GFRA4	Q9GZZ7	299 aa		12.52	□□□□□ -0.41
NCAPD3-213	ENST00000534532	SPCS1	Q9Y6A9	102 aa		12.52	□□□□□ -0.41
NCAPD3-213	ENST00000534532	CENPVL3	A0A0U1RRI6	287 aa		12.51	□□□□□ -0.41
NCAPD3-213	ENST00000534532	VWC2	Q2TAL6	325 aa		12.51	□□□□□ -0.41
NCAPD3-213	ENST00000534532	PRIMA1	Q86XR5	153 aa		12.51	□□□□□ -0.41
NCAPD3-213	ENST00000534532	SPX	Q9BT56	116 aa		12.51	□□□□□ -0.41
NCAPD3-213	ENST00000534532	PLXNA4	Q9HCM2	1894 aa		12.51	□□□□□ -0.41

Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms