RNA–Protein interactions for RNA: ENST00000533079.5

CAPN1-223, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 878 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-223ENST00000533079 ZNF705AQ6ZN79 300 aaPredicted RBP8.85□□□□□ -0.99
CAPN1-223ENST00000533079 FAM213BQ8TBF2 198 aa8.85□□□□□ -0.99
CAPN1-223ENST00000533079 TMEM218A2RU14 115 aa8.84□□□□□ -0.99
CAPN1-223ENST00000533079 HELTA6NFD8 242 aa8.84□□□□□ -0.99
CAPN1-223ENST00000533079 CORTO00230 105 aa8.84□□□□□ -0.99
CAPN1-223ENST00000533079 M6PRP20645 277 aa8.84□□□□□ -0.99
CAPN1-223ENST00000533079 SNRPD3P62318 126 aaKnown RBP8.84□□□□□ -0.99
CAPN1-223ENST00000533079 PEA15Q15121 130 aa8.84□□□□□ -0.99
CAPN1-223ENST00000533079 C10orf91Q5T1B1 145 aa8.84□□□□□ -0.99
CAPN1-223ENST00000533079 ETFRF1Q6IPR1 90 aa8.84□□□□□ -0.99
CAPN1-223ENST00000533079 C6orf223Q8N319 242 aa8.84□□□□□ -0.99
CAPN1-223ENST00000533079 C15orf53Q8NAA6 179 aa8.84□□□□□ -0.99
CAPN1-223ENST00000533079 NIPSNAP3BQ9BS92 247 aa8.84□□□□□ -0.99
CAPN1-223ENST00000533079 PBDC1Q9BVG4 233 aa8.84□□□□□ -0.99
CAPN1-223ENST00000533079 SEPSECSQ9HD40 501 aaKnown RBP8.84□□□□□ -0.99
CAPN1-223ENST00000533079 RFNGQ9Y644 331 aa8.84□□□□□ -0.99
CAPN1-223ENST00000533079 IGHV3-48P01763 117 aa8.83□□□□□ -1
CAPN1-223ENST00000533079 ACOT6Q3I5F7 207 aaPredicted RBP8.83□□□□□ -1
CAPN1-223ENST00000533079 PSMG4Q5JS54 123 aa8.83□□□□□ -1
CAPN1-223ENST00000533079 BPIFCQ8NFQ6 507 aa8.83□□□□□ -1
CAPN1-223ENST00000533079 ACTR3CQ9C0K3 210 aaPredicted RBP8.83□□□□□ -1
CAPN1-223ENST00000533079 XCL2Q9UBD3 114 aa8.83□□□□□ -1
CAPN1-223ENST00000533079 DKK2Q9UBU2 259 aa8.83□□□□□ -1
CAPN1-223ENST00000533079 CTXND1A0A1B0GTU2 59 aa8.82□□□□□ -1
CAPN1-223ENST00000533079 TAGLN2P37802 199 aaKnown RBP8.82□□□□□ -1
CAPN1-223ENST00000533079 GAMTQ14353 236 aa8.82□□□□□ -1
CAPN1-223ENST00000533079 FFAR4Q5NUL3 377 aa8.82□□□□□ -1
CAPN1-223ENST00000533079 SFT2D1Q8WV19 159 aa8.82□□□□□ -1
CAPN1-223ENST00000533079 MGST2Q99735 147 aa8.82□□□□□ -1
CAPN1-223ENST00000533079 SLC39A9Q9NUM3 307 aa8.82□□□□□ -1
CAPN1-223ENST00000533079 SLC45A2Q9UMX9 530 aa8.82□□□□□ -1
CAPN1-223ENST00000533079 DNAH5Q8TE73 4624 aa8.81□□□□□ -1
CAPN1-223ENST00000533079 NBDYA0A0U1RRE5 68 aa8.81□□□□□ -1
CAPN1-223ENST00000533079 H3BMM0 161 aa8.81□□□□□ -1
CAPN1-223ENST00000533079 AGPAT2O15120 278 aa8.81□□□□□ -1
CAPN1-223ENST00000533079 HLA-DRB4P13762 266 aa8.81□□□□□ -1
CAPN1-223ENST00000533079 ZNF726P1Q15940 193 aa8.81□□□□□ -1
CAPN1-223ENST00000533079 GUK1Q16774 197 aa8.81□□□□□ -1
CAPN1-223ENST00000533079 THAP8Q8NA92 274 aa8.81□□□□□ -1
CAPN1-223ENST00000533079 OR10G4Q8NGN3 311 aa8.81□□□□□ -1
CAPN1-223ENST00000533079 OR10G9Q8NGN4 311 aa8.81□□□□□ -1
CAPN1-223ENST00000533079 OR10G7Q8NGN6 311 aa8.81□□□□□ -1
CAPN1-223ENST00000533079 SLC35E1Q96K37 410 aa8.81□□□□□ -1
CAPN1-223ENST00000533079 LINC00052Q96N35 136 aa8.81□□□□□ -1
CAPN1-223ENST00000533079 ATG101Q9BSB4 218 aa8.81□□□□□ -1
CAPN1-223ENST00000533079 SEC11CQ9BY50 192 aa8.81□□□□□ -1
CAPN1-223ENST00000533079 CARHSP1Q9Y2V2 147 aaKnown RBP8.81□□□□□ -1
CAPN1-223ENST00000533079 HLA-DRB4X5D2U9 266 aa8.81□□□□□ -1
CAPN1-223ENST00000533079 NACAE9PAV3 2078 aa8.81□□□□□ -1
CAPN1-223ENST00000533079 SMCO3A2RU48 225 aa8.8□□□□□ -1
CAPN1-223ENST00000533079 RBFOX3A6NFN3 312 aa8.8□□□□□ -1
CAPN1-223ENST00000533079 CLN5O75503 358 aa8.8□□□□□ -1
CAPN1-223ENST00000533079 LINC00869P0C866 280 aa8.8□□□□□ -1
CAPN1-223ENST00000533079 EMP1P54849 157 aa8.8□□□□□ -1
CAPN1-223ENST00000533079 SELENOTP62341 195 aa8.8□□□□□ -1
CAPN1-223ENST00000533079 CCL20P78556 96 aa8.8□□□□□ -1
CAPN1-223ENST00000533079 AKR1C1Q04828 323 aa8.8□□□□□ -1
CAPN1-223ENST00000533079 KHDC3LQ587J8 217 aa8.8□□□□□ -1
CAPN1-223ENST00000533079 ZNF506Q5JVG8 444 aa8.8□□□□□ -1
CAPN1-223ENST00000533079 FAM222AQ5U5X8 452 aa8.8□□□□□ -1
CAPN1-223ENST00000533079 TMEM88Q6PEY1 159 aa8.8□□□□□ -1
CAPN1-223ENST00000533079 GLMPQ8WWB7 406 aa8.8□□□□□ -1
CAPN1-223ENST00000533079 PXMP4Q9Y6I8 212 aa8.8□□□□□ -1
CAPN1-223ENST00000533079 TRAV30A0A087WSZ9 112 aa8.79□□□□□ -1
CAPN1-223ENST00000533079 MAP1LC3B2A6NCE7 125 aa8.79□□□□□ -1
CAPN1-223ENST00000533079 PPT1P50897 306 aa8.79□□□□□ -1
CAPN1-223ENST00000533079 SRSF3P84103 164 aaKnown RBP8.79□□□□□ -1
CAPN1-223ENST00000533079 C16orf54Q6UWD8 224 aa8.79□□□□□ -1
CAPN1-223ENST00000533079 CCDC28AQ8IWP9 274 aa8.79□□□□□ -1
CAPN1-223ENST00000533079 OR4X1Q8NH49 305 aa8.79□□□□□ -1
CAPN1-223ENST00000533079 RAB24Q969Q5 203 aa8.79□□□□□ -1
CAPN1-223ENST00000533079 CLUHP3Q96NS8 147 aa8.79□□□□□ -1
CAPN1-223ENST00000533079 MAP1LC3BQ9GZQ8 125 aa8.79□□□□□ -1
CAPN1-223ENST00000533079 FNDC4Q9H6D8 234 aaPredicted RBP8.79□□□□□ -1
CAPN1-223ENST00000533079 TREM1Q9NP99 234 aa8.79□□□□□ -1
CAPN1-223ENST00000533079 NRN1Q9NPD7 142 aa8.79□□□□□ -1
CAPN1-223ENST00000533079 U3KQE9 123 aa8.79□□□□□ -1
CAPN1-223ENST00000533079 IGKV1OR2-108A0A075B7D4 117 aa8.78□□□□□ -1
CAPN1-223ENST00000533079 HTN3P15516 51 aa8.78□□□□□ -1
CAPN1-223ENST00000533079 B2MP61769 119 aa8.78□□□□□ -1
CAPN1-223ENST00000533079 MIC13Q5XKP0 118 aa8.78□□□□□ -1
CAPN1-223ENST00000533079 SPATA12Q7Z6I5 190 aa8.78□□□□□ -1
CAPN1-223ENST00000533079 ZNRF2Q8NHG8 242 aa8.78□□□□□ -1
CAPN1-223ENST00000533079 TRGV9Q99603 122 aa8.78□□□□□ -1
CAPN1-223ENST00000533079 EIF5A2Q9GZV4 153 aaKnown RBP8.78□□□□□ -1
CAPN1-223ENST00000533079 SLC35B3Q9H1N7 401 aa8.78□□□□□ -1
CAPN1-223ENST00000533079 AGRNO00468 2067 aa8.77□□□□□ -1
CAPN1-223ENST00000533079 A0A1W2PPV4 95 aa8.77□□□□□ -1.01
CAPN1-223ENST00000533079 EPM2AB3EWF7 344 aa8.77□□□□□ -1.01
CAPN1-223ENST00000533079 IFNA1P01562 189 aa8.77□□□□□ -1.01
CAPN1-223ENST00000533079 STAG3L2P0CL84 134 aa8.77□□□□□ -1.01
CAPN1-223ENST00000533079 STAG3L3P0CL85 134 aa8.77□□□□□ -1.01
CAPN1-223ENST00000533079 OR10J1P30954 320 aa8.77□□□□□ -1.01
CAPN1-223ENST00000533079 CDC34P49427 236 aaPredicted RBP8.77□□□□□ -1.01
CAPN1-223ENST00000533079 PSMB3P49720 205 aa8.77□□□□□ -1.01
CAPN1-223ENST00000533079 DAD1P61803 113 aa8.77□□□□□ -1.01
CAPN1-223ENST00000533079 RHOBP62745 196 aa8.77□□□□□ -1.01
CAPN1-223ENST00000533079 MLANAQ16655 118 aa8.77□□□□□ -1.01
CAPN1-223ENST00000533079 LCN15Q6UWW0 184 aa8.77□□□□□ -1.01
CAPN1-223ENST00000533079 CYP2G1PQ6ZSU1 146 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms