RNA–Protein interactions for RNA: ENST00000531405.5

SSSCA1-206, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSSCA1, Length 879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-206ENST00000531405 TMPRSS5Q9H3S3 457 aa12.74□□□□□ -0.37
SSSCA1-206ENST00000531405 SCRT2Q9NQ03 307 aa12.74□□□□□ -0.37
SSSCA1-206ENST00000531405 RNF24Q9Y225 148 aa12.74□□□□□ -0.37
SSSCA1-206ENST00000531405 TRAV12-3A0A0B4J271 114 aa12.73□□□□□ -0.37
SSSCA1-206ENST00000531405 SNURFLB1AK76 121 aa12.73□□□□□ -0.37
SSSCA1-206ENST00000531405 H3BQ15 152 aa12.73□□□□□ -0.37
SSSCA1-206ENST00000531405 TSC22D2O75157 780 aa12.73□□□□□ -0.37
SSSCA1-206ENST00000531405 UPK3BQ9BT76 320 aa12.73□□□□□ -0.37
SSSCA1-206ENST00000531405 GSKIPQ9P0R6 139 aa12.73□□□□□ -0.37
SSSCA1-206ENST00000531405 CT45A10P0DMU9 189 aa12.72□□□□□ -0.37
SSSCA1-206ENST00000531405 IGLC2P0DOY2 106 aa12.72□□□□□ -0.37
SSSCA1-206ENST00000531405 BAK1Q16611 211 aa12.72□□□□□ -0.37
SSSCA1-206ENST00000531405 C4orf46Q504U0 113 aa12.72□□□□□ -0.37
SSSCA1-206ENST00000531405 C10orf113Q5VZT2 155 aa12.72□□□□□ -0.37
SSSCA1-206ENST00000531405 Q6ZTI0 123 aa12.72□□□□□ -0.37
SSSCA1-206ENST00000531405 ZNF586Q9NXT0 402 aa12.72□□□□□ -0.37
SSSCA1-206ENST00000531405 MRPS16Q9Y3D3 137 aaKnown RBP12.72□□□□□ -0.37
SSSCA1-206ENST00000531405 TRAV5A0A0B4J249 113 aa12.71□□□□□ -0.37
SSSCA1-206ENST00000531405 C7orf66A4D0T2 115 aa12.71□□□□□ -0.37
SSSCA1-206ENST00000531405 CCDC160A6NGH7 325 aa12.71□□□□□ -0.37
SSSCA1-206ENST00000531405 INPP1P49441 399 aa12.71□□□□□ -0.37
SSSCA1-206ENST00000531405 TAS2R30P59541 319 aa12.71□□□□□ -0.37
SSSCA1-206ENST00000531405 SAT2Q96F10 170 aaPredicted RBP12.71□□□□□ -0.37
SSSCA1-206ENST00000531405 PXMP4Q9Y6I8 212 aa12.71□□□□□ -0.37
SSSCA1-206ENST00000531405 HERC1Q15751 4861 aa12.7□□□□□ -0.38
SSSCA1-206ENST00000531405 NAP1L6A6NFF2 107 aa12.7□□□□□ -0.38
SSSCA1-206ENST00000531405 MBPP02686 304 aaPredicted RBP12.7□□□□□ -0.38
SSSCA1-206ENST00000531405 BTCP35070 178 aa12.7□□□□□ -0.38
SSSCA1-206ENST00000531405 SPANXN2Q5MJ10 180 aa12.7□□□□□ -0.38
SSSCA1-206ENST00000531405 TRIQKQ629K1 86 aa12.7□□□□□ -0.38
SSSCA1-206ENST00000531405 ZNF431Q8TF32 576 aaPredicted RBP12.7□□□□□ -0.38
SSSCA1-206ENST00000531405 A0A1W2PPQ1 181 aa12.69□□□□□ -0.38
SSSCA1-206ENST00000531405 NPIPB6E9PJ23 425 aa12.69□□□□□ -0.38
SSSCA1-206ENST00000531405 H3BNG1 76 aa12.69□□□□□ -0.38
SSSCA1-206ENST00000531405 LEPP41159 167 aa12.69□□□□□ -0.38
SSSCA1-206ENST00000531405 VSIG2Q96IQ7 327 aa12.69□□□□□ -0.38
SSSCA1-206ENST00000531405 GGACTQ9BVM4 153 aa12.69□□□□□ -0.38
SSSCA1-206ENST00000531405 A0A096LPF7 62 aa12.68□□□□□ -0.38
SSSCA1-206ENST00000531405 CCSO14618 274 aa12.68□□□□□ -0.38
SSSCA1-206ENST00000531405 BTF3P20290 206 aaKnown RBP12.68□□□□□ -0.38
SSSCA1-206ENST00000531405 CAMLGP49069 296 aa12.68□□□□□ -0.38
SSSCA1-206ENST00000531405 MIC13Q5XKP0 118 aa12.68□□□□□ -0.38
SSSCA1-206ENST00000531405 ODF3Q96PU9 254 aa12.68□□□□□ -0.38
SSSCA1-206ENST00000531405 PYGO2Q9BRQ0 406 aa12.68□□□□□ -0.38
SSSCA1-206ENST00000531405 DNAJC4Q9NNZ3 241 aa12.68□□□□□ -0.38
SSSCA1-206ENST00000531405 FUSP35637 526 aaKnown RBP eCLIP12.67□□□□□ -0.38
SSSCA1-206ENST00000531405 LINC00315P59091 139 aa12.67□□□□□ -0.38
SSSCA1-206ENST00000531405 DAZ2Q13117 558 aaKnown RBP12.67□□□□□ -0.38
SSSCA1-206ENST00000531405 ERCC8Q13216 396 aa12.67□□□□□ -0.38
SSSCA1-206ENST00000531405 NRARPQ7Z6K4 114 aa12.67□□□□□ -0.38
SSSCA1-206ENST00000531405 MITD1Q8WV92 249 aa12.67□□□□□ -0.38
SSSCA1-206ENST00000531405 GSN-AS1Q9NRJ2 163 aa12.67□□□□□ -0.38
SSSCA1-206ENST00000531405 L7N2F9 121 aa12.66□□□□□ -0.38
SSSCA1-206ENST00000531405 CST7O76096 145 aa12.66□□□□□ -0.38
SSSCA1-206ENST00000531405 VAMP2P63027 116 aa12.66□□□□□ -0.38
SSSCA1-206ENST00000531405 Q6ZRG5 221 aa12.66□□□□□ -0.38
SSSCA1-206ENST00000531405 C11orf72Q8NBR9 251 aa12.66□□□□□ -0.38
SSSCA1-206ENST00000531405 SDHCQ99643 169 aaPredicted RBP12.66□□□□□ -0.38
SSSCA1-206ENST00000531405 LSM5Q9Y4Y9 91 aaKnown RBP12.66□□□□□ -0.38
SSSCA1-206ENST00000531405 TRGV2A0A075B6R0 118 aa12.65□□□□□ -0.38
SSSCA1-206ENST00000531405 M0R3E3 92 aa12.65□□□□□ -0.38
SSSCA1-206ENST00000531405 BCAP31P51572 246 aa12.65□□□□□ -0.38
SSSCA1-206ENST00000531405 GUK1Q16774 197 aa12.65□□□□□ -0.38
SSSCA1-206ENST00000531405 Q6ZRN7 208 aaPredicted RBP12.65□□□□□ -0.38
SSSCA1-206ENST00000531405 TRGV1A0A0A0MS02 117 aa12.64□□□□□ -0.39
SSSCA1-206ENST00000531405 C7orf71A4D174 169 aa12.64□□□□□ -0.39
SSSCA1-206ENST00000531405 SLC25A5P05141 298 aaKnown RBP12.64□□□□□ -0.39
SSSCA1-206ENST00000531405 CD300CQ08708 224 aa12.64□□□□□ -0.39
SSSCA1-206ENST00000531405 BTN1A1Q13410 526 aa12.64□□□□□ -0.39
SSSCA1-206ENST00000531405 RBM38Q9H0Z9 239 aaKnown RBP12.64□□□□□ -0.39
SSSCA1-206ENST00000531405 FUT9Q9Y231 359 aa12.64□□□□□ -0.39
SSSCA1-206ENST00000531405 FAT1Q14517 4588 aa12.64□□□□□ -0.39
SSSCA1-206ENST00000531405 FAM24AA6NFZ4 105 aa12.63□□□□□ -0.39
SSSCA1-206ENST00000531405 CENPXA8MT69 81 aa12.63□□□□□ -0.39
SSSCA1-206ENST00000531405 FAM25EA8MYX2 175 aa12.63□□□□□ -0.39
SSSCA1-206ENST00000531405 CAV2P51636 162 aa12.63□□□□□ -0.39
SSSCA1-206ENST00000531405 RAB31Q13636 194 aa12.63□□□□□ -0.39
SSSCA1-206ENST00000531405 ZNF680Q8NEM1 530 aa12.63□□□□□ -0.39
SSSCA1-206ENST00000531405 OR1L4Q8NGR5 311 aa12.63□□□□□ -0.39
SSSCA1-206ENST00000531405 WDR83OSQ9Y284 106 aa12.63□□□□□ -0.39
SSSCA1-206ENST00000531405 KLF12Q9Y4X4 402 aa12.63□□□□□ -0.39
SSSCA1-206ENST00000531405 TRBV19A0A075B6N1 114 aa12.62□□□□□ -0.39
SSSCA1-206ENST00000531405 UBE2L5PA0A1B0GUS4 154 aa12.62□□□□□ -0.39
SSSCA1-206ENST00000531405 SIVA1O15304 175 aa12.62□□□□□ -0.39
SSSCA1-206ENST00000531405 ZNF324O75467 553 aaPredicted RBP12.62□□□□□ -0.39
SSSCA1-206ENST00000531405 ZNF846Q147U1 533 aa12.62□□□□□ -0.39
SSSCA1-206ENST00000531405 PFDN5Q99471 154 aa12.62□□□□□ -0.39
SSSCA1-206ENST00000531405 C20orf85Q9H1P6 137 aa12.62□□□□□ -0.39
SSSCA1-206ENST00000531405 C11orf1Q9H5F2 150 aa12.62□□□□□ -0.39
SSSCA1-206ENST00000531405 SLC39A9Q9NUM3 307 aa12.62□□□□□ -0.39
SSSCA1-206ENST00000531405 UQCC1Q9NVA1 299 aa12.62□□□□□ -0.39
SSSCA1-206ENST00000531405 KLLNB2CW77 178 aa12.61□□□□□ -0.39
SSSCA1-206ENST00000531405 ZNF253O75346 499 aa12.61□□□□□ -0.39
SSSCA1-206ENST00000531405 NDUFB4O95168 129 aa12.61□□□□□ -0.39
SSSCA1-206ENST00000531405 PYYP10082 97 aa12.61□□□□□ -0.39
SSSCA1-206ENST00000531405 RNASE4P34096 147 aaKnown RBP12.61□□□□□ -0.39
SSSCA1-206ENST00000531405 BAXQ07812 192 aa12.61□□□□□ -0.39
SSSCA1-206ENST00000531405 EIF4E3Q8N5X7 224 aaKnown RBP12.61□□□□□ -0.39
SSSCA1-206ENST00000531405 MRPL53Q96EL3 112 aaKnown RBP12.61□□□□□ -0.39
SSSCA1-206ENST00000531405 FAM19A4Q96LR4 140 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms