RNA–Protein interactions for RNA: ENST00000529214.5

ATPAF1-209, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-209ENST00000529214 LPAR6P43657 344 aa4.88□□□□□ -1.63
ATPAF1-209ENST00000529214 RPS10P46783 165 aaKnown RBP4.88□□□□□ -1.63
ATPAF1-209ENST00000529214 TAS2R31P59538 309 aa4.88□□□□□ -1.63
ATPAF1-209ENST00000529214 RND3P61587 244 aa4.88□□□□□ -1.63
ATPAF1-209ENST00000529214 MEF2BQ02080 365 aaPredicted RBP4.88□□□□□ -1.63
ATPAF1-209ENST00000529214 GAGE4Q13068 117 aa4.88□□□□□ -1.63
ATPAF1-209ENST00000529214 PPP1R1AQ13522 171 aa4.88□□□□□ -1.63
ATPAF1-209ENST00000529214 KLF9Q13886 244 aaPredicted RBP4.88□□□□□ -1.63
ATPAF1-209ENST00000529214 IL34Q6ZMJ4 242 aa4.88□□□□□ -1.63
ATPAF1-209ENST00000529214 MMD2Q8IY49 270 aa4.88□□□□□ -1.63
ATPAF1-209ENST00000529214 TOMM5Q8N4H5 51 aa4.88□□□□□ -1.63
ATPAF1-209ENST00000529214 FAM24BQ8N5W8 94 aa4.88□□□□□ -1.63
ATPAF1-209ENST00000529214 OR4X2Q8NGF9 303 aa4.88□□□□□ -1.63
ATPAF1-209ENST00000529214 OR1S2Q8NGQ3 325 aa4.88□□□□□ -1.63
ATPAF1-209ENST00000529214 OR2G3Q8NGZ4 309 aa4.88□□□□□ -1.63
ATPAF1-209ENST00000529214 OR4X1Q8NH49 305 aa4.88□□□□□ -1.63
ATPAF1-209ENST00000529214 VSTM2AQ8TAG5 236 aa4.88□□□□□ -1.63
ATPAF1-209ENST00000529214 TMEM167AQ8TBQ9 72 aa4.88□□□□□ -1.63
ATPAF1-209ENST00000529214 OR2A7Q96R45 310 aa4.88□□□□□ -1.63
ATPAF1-209ENST00000529214 RTBDNQ9BSG5 229 aaPredicted RBP4.88□□□□□ -1.63
ATPAF1-209ENST00000529214 FAM103A1Q9BTL3 118 aaKnown RBP4.88□□□□□ -1.63
ATPAF1-209ENST00000529214 C1QTNF4Q9BXJ3 329 aa4.88□□□□□ -1.63
ATPAF1-209ENST00000529214 RETNQ9HD89 108 aa4.88□□□□□ -1.63
ATPAF1-209ENST00000529214 RPS10P5Q9NQ39 176 aa4.88□□□□□ -1.63
ATPAF1-209ENST00000529214 PARP11Q9NR21 331 aa4.88□□□□□ -1.63
ATPAF1-209ENST00000529214 LSM5Q9Y4Y9 91 aaKnown RBP4.88□□□□□ -1.63
ATPAF1-209ENST00000529214 OR4C46A6NHA9 309 aa4.87□□□□□ -1.63
ATPAF1-209ENST00000529214 PRSS46E5RG02 174 aa4.87□□□□□ -1.63
ATPAF1-209ENST00000529214 J3KT08 172 aa4.87□□□□□ -1.63
ATPAF1-209ENST00000529214 PLA2G10O15496 165 aa4.87□□□□□ -1.63
ATPAF1-209ENST00000529214 LYRM1O43325 122 aa4.87□□□□□ -1.63
ATPAF1-209ENST00000529214 HIST1H2BKO60814 126 aa4.87□□□□□ -1.63
ATPAF1-209ENST00000529214 KBTBD11O94819 623 aa4.87□□□□□ -1.63
ATPAF1-209ENST00000529214 HIST1H2BJP06899 126 aa4.87□□□□□ -1.63
ATPAF1-209ENST00000529214 CXCL2P19875 107 aa4.87□□□□□ -1.63
ATPAF1-209ENST00000529214 HIST1H2BOP23527 126 aa4.87□□□□□ -1.63
ATPAF1-209ENST00000529214 PSMB8P28062 276 aa4.87□□□□□ -1.63
ATPAF1-209ENST00000529214 HIST1H2BBP33778 126 aa4.87□□□□□ -1.63
ATPAF1-209ENST00000529214 FAUP35544 74 aaKnown RBP4.87□□□□□ -1.63
ATPAF1-209ENST00000529214 HIST1H2BDP58876 126 aa4.87□□□□□ -1.63
ATPAF1-209ENST00000529214 HIST1H2BCP62807 126 aa4.87□□□□□ -1.63
ATPAF1-209ENST00000529214 HIST2H2BEQ16778 126 aa4.87□□□□□ -1.63
ATPAF1-209ENST00000529214 NSUN5P1Q3KNT7 163 aa4.87□□□□□ -1.63
ATPAF1-209ENST00000529214 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.87□□□□□ -1.63
ATPAF1-209ENST00000529214 UNQ5815/PRO19632Q6UWF5 114 aa4.87□□□□□ -1.63
ATPAF1-209ENST00000529214 OR2T35Q8NGX2 323 aa4.87□□□□□ -1.63
ATPAF1-209ENST00000529214 OR4A5Q8NH83 315 aa4.87□□□□□ -1.63
ATPAF1-209ENST00000529214 ARPC1AQ92747 370 aa4.87□□□□□ -1.63
ATPAF1-209ENST00000529214 HIST1H2BHQ93079 126 aa4.87□□□□□ -1.63
ATPAF1-209ENST00000529214 PHYHIPLQ96FC7 376 aa4.87□□□□□ -1.63
ATPAF1-209ENST00000529214 SCGB3A2Q96PL1 93 aa4.87□□□□□ -1.63
ATPAF1-209ENST00000529214 HIST1H2BNQ99877 126 aa4.87□□□□□ -1.63
ATPAF1-209ENST00000529214 HIST1H2BMQ99879 126 aa4.87□□□□□ -1.63
ATPAF1-209ENST00000529214 KLK15Q9H2R5 256 aa4.87□□□□□ -1.63
ATPAF1-209ENST00000529214 C5orf66Q9H5L9 145 aa4.87□□□□□ -1.63
ATPAF1-209ENST00000529214 SPANXCQ9NY87 97 aa4.87□□□□□ -1.63
ATPAF1-209ENST00000529214 COMMD9Q9P000 198 aa4.87□□□□□ -1.63
ATPAF1-209ENST00000529214 VAX2Q9UIW0 290 aa4.87□□□□□ -1.63
ATPAF1-209ENST00000529214 TRAV3A0A0B4J244 114 aa4.86□□□□□ -1.63
ATPAF1-209ENST00000529214 C3orf85A0A1B0GTC6 90 aa4.86□□□□□ -1.63
ATPAF1-209ENST00000529214 MSGN1A6NI15 193 aa4.86□□□□□ -1.63
ATPAF1-209ENST00000529214 HMSDA8MTL9 139 aa4.86□□□□□ -1.63
ATPAF1-209ENST00000529214 E7EUB6 86 aa4.86□□□□□ -1.63
ATPAF1-209ENST00000529214 UPK2O00526 184 aa4.86□□□□□ -1.63
ATPAF1-209ENST00000529214 CREBL2O60519 120 aaPredicted RBP4.86□□□□□ -1.63
ATPAF1-209ENST00000529214 KRASP01116 189 aa4.86□□□□□ -1.63
ATPAF1-209ENST00000529214 IGKV1-39P01597 117 aa4.86□□□□□ -1.63
ATPAF1-209ENST00000529214 IGKV1D-39P04432 117 aa4.86□□□□□ -1.63
ATPAF1-209ENST00000529214 EMP1P54849 157 aa4.86□□□□□ -1.63
ATPAF1-209ENST00000529214 GNB1P62873 340 aa4.86□□□□□ -1.63
ATPAF1-209ENST00000529214 ECSCRQ19T08 205 aa4.86□□□□□ -1.63
ATPAF1-209ENST00000529214 ASPHD1Q5U4P2 390 aa4.86□□□□□ -1.63
ATPAF1-209ENST00000529214 GFI1BQ5VTD9 330 aa4.86□□□□□ -1.63
ATPAF1-209ENST00000529214 ZNF57Q68EA5 555 aaPredicted RBP4.86□□□□□ -1.63
ATPAF1-209ENST00000529214 LCNL1Q6ZST4 164 aa4.86□□□□□ -1.63
ATPAF1-209ENST00000529214 FAM19A5Q7Z5A7 132 aaPredicted RBP4.86□□□□□ -1.63
ATPAF1-209ENST00000529214 MYOZ3Q8TDC0 251 aa4.86□□□□□ -1.63
ATPAF1-209ENST00000529214 SRSF12Q8WXF0 261 aaKnown RBP4.86□□□□□ -1.63
ATPAF1-209ENST00000529214 TMEM18Q96B42 140 aa4.86□□□□□ -1.63
ATPAF1-209ENST00000529214 SEC22AQ96IW7 307 aa4.86□□□□□ -1.63
ATPAF1-209ENST00000529214 SGK494Q96LW2 274 aa4.86□□□□□ -1.63
ATPAF1-209ENST00000529214 CMYA5Q8N3K9 4069 aa4.86□□□□□ -1.63
ATPAF1-209ENST00000529214 PLXNB1O43157 2135 aa4.85□□□□□ -1.63
ATPAF1-209ENST00000529214 TRBV9A0A0B4J1U6 114 aa4.85□□□□□ -1.63
ATPAF1-209ENST00000529214 A0A1B0GX51 115 aa4.85□□□□□ -1.63
ATPAF1-209ENST00000529214 AGPAT2O15120 278 aa4.85□□□□□ -1.63
ATPAF1-209ENST00000529214 RPL7P18124 248 aaKnown RBP4.85□□□□□ -1.63
ATPAF1-209ENST00000529214 NTF3P20783 257 aa4.85□□□□□ -1.63
ATPAF1-209ENST00000529214 SRIP30626 198 aa4.85□□□□□ -1.63
ATPAF1-209ENST00000529214 G6PCP35575 357 aa4.85□□□□□ -1.63
ATPAF1-209ENST00000529214 SNCAP37840 140 aa4.85□□□□□ -1.63
ATPAF1-209ENST00000529214 INPP1P49441 399 aa4.85□□□□□ -1.63
ATPAF1-209ENST00000529214 ERVK-16P61578 105 aa4.85□□□□□ -1.63
ATPAF1-209ENST00000529214 AKR1C1Q04828 323 aa4.85□□□□□ -1.63
ATPAF1-209ENST00000529214 C4orf26Q17RF5 130 aa4.85□□□□□ -1.63
ATPAF1-209ENST00000529214 SP6Q3SY56 376 aa4.85□□□□□ -1.63
ATPAF1-209ENST00000529214 TTC9CQ8N5M4 171 aa4.85□□□□□ -1.63
ATPAF1-209ENST00000529214 ZNF491Q8N8L2 437 aa4.85□□□□□ -1.63
ATPAF1-209ENST00000529214 OR4F17Q8NGA8 305 aa4.85□□□□□ -1.63
ATPAF1-209ENST00000529214 ZNRF2Q8NHG8 242 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms