RNA–Protein interactions for RNA: ENST00000521932.1

VPS13B-210, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 1,055 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-210ENST00000521932 ZNF503Q96F45 646 aa6.19□□□□□ -1.42
VPS13B-210ENST00000521932 OR51M1Q9H341 326 aa6.19□□□□□ -1.42
VPS13B-210ENST00000521932 ZNF586Q9NXT0 402 aa6.19□□□□□ -1.42
VPS13B-210ENST00000521932 TRBV19A0A075B6N1 114 aa6.18□□□□□ -1.42
VPS13B-210ENST00000521932 UMAD1C9J7I0 102 aa6.18□□□□□ -1.42
VPS13B-210ENST00000521932 STAG3L2P0CL84 134 aa6.18□□□□□ -1.42
VPS13B-210ENST00000521932 STAG3L3P0CL85 134 aa6.18□□□□□ -1.42
VPS13B-210ENST00000521932 IGHV4-30-4P0DP06 118 aa6.18□□□□□ -1.42
VPS13B-210ENST00000521932 HIST1H1EP10412 219 aaKnown RBP6.18□□□□□ -1.42
VPS13B-210ENST00000521932 ID1P41134 155 aa6.18□□□□□ -1.42
VPS13B-210ENST00000521932 CDC34P49427 236 aaPredicted RBP6.18□□□□□ -1.42
VPS13B-210ENST00000521932 NKX2-5P52952 324 aaPredicted RBP6.18□□□□□ -1.42
VPS13B-210ENST00000521932 PDE6HQ13956 83 aa6.18□□□□□ -1.42
VPS13B-210ENST00000521932 KHDC3LQ587J8 217 aa6.18□□□□□ -1.42
VPS13B-210ENST00000521932 AKR1C8PQ5T2L2 129 aa6.18□□□□□ -1.42
VPS13B-210ENST00000521932 EIF5AL1Q6IS14 154 aaKnown RBP6.18□□□□□ -1.42
VPS13B-210ENST00000521932 LCN15Q6UWW0 184 aa6.18□□□□□ -1.42
VPS13B-210ENST00000521932 LINC00322Q6ZN03 302 aaPredicted RBP6.18□□□□□ -1.42
VPS13B-210ENST00000521932 PQLC2Q6ZP29 291 aa6.18□□□□□ -1.42
VPS13B-210ENST00000521932 DEFB125Q8N687 156 aa6.18□□□□□ -1.42
VPS13B-210ENST00000521932 FXYD5Q96DB9 178 aa6.18□□□□□ -1.42
VPS13B-210ENST00000521932 PAXXQ9BUH6 204 aa6.18□□□□□ -1.42
VPS13B-210ENST00000521932 ACTR3CQ9C0K3 210 aaPredicted RBP6.18□□□□□ -1.42
VPS13B-210ENST00000521932 MAP6D1Q9H9H5 199 aa6.18□□□□□ -1.42
VPS13B-210ENST00000521932 ZNF331Q9NQX6 463 aaPredicted RBP6.18□□□□□ -1.42
VPS13B-210ENST00000521932 UBQLN2Q9UHD9 624 aa6.18□□□□□ -1.42
VPS13B-210ENST00000521932 TRAV8-2A0A0B4J237 113 aa6.17□□□□□ -1.42
VPS13B-210ENST00000521932 NDUFB4O95168 129 aa6.17□□□□□ -1.42
VPS13B-210ENST00000521932 NBEAP1P0C6P0 100 aa6.17□□□□□ -1.42
VPS13B-210ENST00000521932 PYYP10082 97 aa6.17□□□□□ -1.42
VPS13B-210ENST00000521932 BTF3P20290 206 aaKnown RBP6.17□□□□□ -1.42
VPS13B-210ENST00000521932 RAB5CP51148 216 aa6.17□□□□□ -1.42
VPS13B-210ENST00000521932 DEFB131AP59861 70 aa6.17□□□□□ -1.42
VPS13B-210ENST00000521932 ZNF726P1Q15940 193 aa6.17□□□□□ -1.42
VPS13B-210ENST00000521932 FAM122CQ6P4D5 195 aa6.17□□□□□ -1.42
VPS13B-210ENST00000521932 DPPA3Q6W0C5 159 aa6.17□□□□□ -1.42
VPS13B-210ENST00000521932 APRG1Q8IVJ8 170 aa6.17□□□□□ -1.42
VPS13B-210ENST00000521932 SUN5Q8TC36 379 aa6.17□□□□□ -1.42
VPS13B-210ENST00000521932 TMED6Q8WW62 240 aa6.17□□□□□ -1.42
VPS13B-210ENST00000521932 PHYHIPLQ96FC7 376 aa6.17□□□□□ -1.42
VPS13B-210ENST00000521932 SLC50A1Q9BRV3 221 aa6.17□□□□□ -1.42
VPS13B-210ENST00000521932 CLEC5AQ9NY25 188 aa6.17□□□□□ -1.42
VPS13B-210ENST00000521932 NOTCH1P46531 2555 aa6.17□□□□□ -1.42
VPS13B-210ENST00000521932 DNAH3Q8TD57 4116 aa6.17□□□□□ -1.42
VPS13B-210ENST00000521932 CTXND1A0A1B0GTU2 59 aa6.16□□□□□ -1.42
VPS13B-210ENST00000521932 OR7C2O60412 319 aa6.16□□□□□ -1.42
VPS13B-210ENST00000521932 CXorf1O96002 111 aa6.16□□□□□ -1.42
VPS13B-210ENST00000521932 OR10J4P0C629 311 aa6.16□□□□□ -1.42
VPS13B-210ENST00000521932 ZNF688P0C7X2 276 aa6.16□□□□□ -1.42
VPS13B-210ENST00000521932 GCSHP23434 173 aa6.16□□□□□ -1.42
VPS13B-210ENST00000521932 PSG9Q00887 426 aa6.16□□□□□ -1.42
VPS13B-210ENST00000521932 PSG3Q16557 428 aa6.16□□□□□ -1.42
VPS13B-210ENST00000521932 DEFB121Q5J5C9 76 aa6.16□□□□□ -1.42
VPS13B-210ENST00000521932 PSMG4Q5JS54 123 aa6.16□□□□□ -1.42
VPS13B-210ENST00000521932 SSX7Q7RTT5 188 aa6.16□□□□□ -1.42
VPS13B-210ENST00000521932 LYPD1Q8N2G4 141 aa6.16□□□□□ -1.42
VPS13B-210ENST00000521932 LRRC20Q8TCA0 184 aa6.16□□□□□ -1.42
VPS13B-210ENST00000521932 MRAPQ8TCY5 172 aa6.16□□□□□ -1.42
VPS13B-210ENST00000521932 MBD3L1Q8WWY6 194 aa6.16□□□□□ -1.42
VPS13B-210ENST00000521932 WFDC10AQ9H1F0 79 aa6.16□□□□□ -1.42
VPS13B-210ENST00000521932 MEGF8Q7Z7M0 2845 aa6.15□□□□□ -1.42
VPS13B-210ENST00000521932 LOC102723971A0A1B0GUV8 181 aa6.15□□□□□ -1.42
VPS13B-210ENST00000521932 RBMY1BA6NDE4 496 aaKnown RBP6.15□□□□□ -1.42
VPS13B-210ENST00000521932 RBMY1EA6NEQ0 496 aaKnown RBP6.15□□□□□ -1.42
VPS13B-210ENST00000521932 SLC17A3O00476 420 aa6.15□□□□□ -1.42
VPS13B-210ENST00000521932 HMGB3O15347 200 aaKnown RBP6.15□□□□□ -1.42
VPS13B-210ENST00000521932 EIF3GO75821 320 aaKnown RBP eCLIP6.15□□□□□ -1.42
VPS13B-210ENST00000521932 SNRPCP09234 159 aaKnown RBP6.15□□□□□ -1.42
VPS13B-210ENST00000521932 RBMY1DP0C7P1 496 aaKnown RBP6.15□□□□□ -1.42
VPS13B-210ENST00000521932 ARL14EPLP0DKL9 152 aa6.15□□□□□ -1.42
VPS13B-210ENST00000521932 FHITP49789 147 aa6.15□□□□□ -1.42
VPS13B-210ENST00000521932 SULT1A2P50226 295 aa6.15□□□□□ -1.42
VPS13B-210ENST00000521932 BLNKQ8WV28 456 aa6.15□□□□□ -1.42
VPS13B-210ENST00000521932 MRPL53Q96EL3 112 aaKnown RBP6.15□□□□□ -1.42
VPS13B-210ENST00000521932 LINC00052Q96N35 136 aa6.15□□□□□ -1.42
VPS13B-210ENST00000521932 SAV1Q9H4B6 383 aaPredicted RBP6.15□□□□□ -1.42
VPS13B-210ENST00000521932 TUBA4BQ9H853 241 aa6.15□□□□□ -1.42
VPS13B-210ENST00000521932 SRD5A3Q9H8P0 318 aa6.15□□□□□ -1.42
VPS13B-210ENST00000521932 A0A0J9YX75 114 aa6.14□□□□□ -1.43
VPS13B-210ENST00000521932 H3BMM0 161 aa6.14□□□□□ -1.43
VPS13B-210ENST00000521932 H3BTX0 84 aa6.14□□□□□ -1.43
VPS13B-210ENST00000521932 BOLA2-SMG1P6H3BVE0 249 aa6.14□□□□□ -1.43
VPS13B-210ENST00000521932 FRMD6-AS1P0C7T7 363 aa6.14□□□□□ -1.43
VPS13B-210ENST00000521932 HLA-DMBP28068 263 aa6.14□□□□□ -1.43
VPS13B-210ENST00000521932 GCHFRP30047 84 aa6.14□□□□□ -1.43
VPS13B-210ENST00000521932 UBE2L3P68036 154 aaKnown RBP6.14□□□□□ -1.43
VPS13B-210ENST00000521932 FOXI2Q6ZQN5 318 aa6.14□□□□□ -1.43
VPS13B-210ENST00000521932 TRPT1Q86TN4 253 aaKnown RBP6.14□□□□□ -1.43
VPS13B-210ENST00000521932 RNF182Q8N6D2 247 aa6.14□□□□□ -1.43
VPS13B-210ENST00000521932 ARL6IP6Q8N6S5 226 aa6.14□□□□□ -1.43
VPS13B-210ENST00000521932 IL17DQ8TAD2 202 aa6.14□□□□□ -1.43
VPS13B-210ENST00000521932 TMEM167BQ9NRX6 74 aa6.14□□□□□ -1.43
VPS13B-210ENST00000521932 PRELID1Q9Y255 219 aa6.14□□□□□ -1.43
VPS13B-210ENST00000521932 FBN3Q75N90 2809 aa6.14□□□□□ -1.43
VPS13B-210ENST00000521932 LOC102724200A0A096LPH7 203 aaPredicted RBP6.13□□□□□ -1.43
VPS13B-210ENST00000521932 TRAV1-1A0A0B4J248 108 aa6.13□□□□□ -1.43
VPS13B-210ENST00000521932 KIR2DL5BA0A0G2JN68 375 aa6.13□□□□□ -1.43
VPS13B-210ENST00000521932 KIR2DL5BA0A0G2JPC4 375 aa6.13□□□□□ -1.43
VPS13B-210ENST00000521932 A8MTW9 85 aa6.13□□□□□ -1.43
VPS13B-210ENST00000521932 HLA-DRB4P13762 266 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms