RNA–Protein interactions for RNA: ENST00000521559.1

VPS13B-209, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 466 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-209ENST00000521559 YPEL3P61236 119 aaPredicted RBP2.31□□□□□ -2.04
VPS13B-209ENST00000521559 ATP6V1FQ16864 119 aa2.31□□□□□ -2.04
VPS13B-209ENST00000521559 RPEL1Q2QD12 228 aa2.31□□□□□ -2.04
VPS13B-209ENST00000521559 TIGITQ495A1 244 aa2.31□□□□□ -2.04
VPS13B-209ENST00000521559 Q5BKY6 102 aa2.31□□□□□ -2.04
VPS13B-209ENST00000521559 OR8G2PQ6IF36 304 aa2.31□□□□□ -2.04
VPS13B-209ENST00000521559 ZNF600Q6ZNG1 722 aa2.31□□□□□ -2.04
VPS13B-209ENST00000521559 TMEM144Q7Z5S9 345 aa2.31□□□□□ -2.04
VPS13B-209ENST00000521559 UBAC2Q8NBM4 344 aa2.31□□□□□ -2.04
VPS13B-209ENST00000521559 OR2T35Q8NGX2 323 aa2.31□□□□□ -2.04
VPS13B-209ENST00000521559 DLX4Q92988 240 aaPredicted RBP2.31□□□□□ -2.04
VPS13B-209ENST00000521559 ACY3Q96HD9 319 aa2.31□□□□□ -2.04
VPS13B-209ENST00000521559 TRGV9Q99603 122 aa2.31□□□□□ -2.04
VPS13B-209ENST00000521559 CHRDL1Q9BU40 450 aa2.31□□□□□ -2.04
VPS13B-209ENST00000521559 TMEM147Q9BVK8 224 aa2.31□□□□□ -2.04
VPS13B-209ENST00000521559 GGACTQ9BVM4 153 aa2.31□□□□□ -2.04
VPS13B-209ENST00000521559 SLC25A31Q9H0C2 315 aa2.31□□□□□ -2.04
VPS13B-209ENST00000521559 ZC4H2Q9NQZ6 224 aa2.31□□□□□ -2.04
VPS13B-209ENST00000521559 LYRM2Q9NU23 88 aaPredicted RBP2.31□□□□□ -2.04
VPS13B-209ENST00000521559 OR5AC2Q9NZP5 309 aa2.31□□□□□ -2.04
VPS13B-209ENST00000521559 MBD2Q9UBB5 411 aa2.31□□□□□ -2.04
VPS13B-209ENST00000521559 ZNF256Q9Y2P7 627 aaPredicted RBP2.31□□□□□ -2.04
VPS13B-209ENST00000521559 JMJD1CQ15652 2540 aa2.31□□□□□ -2.04
VPS13B-209ENST00000521559 C2CD3Q4AC94 2353 aa2.3□□□□□ -2.04
VPS13B-209ENST00000521559 NSD1Q96L73 2696 aaPredicted RBP2.3□□□□□ -2.04
VPS13B-209ENST00000521559 ZANQ9Y493 2812 aa2.3□□□□□ -2.04
VPS13B-209ENST00000521559 IGKV1D-37A0A075B6S9 117 aa2.3□□□□□ -2.04
VPS13B-209ENST00000521559 IGHV3-35A0A0C4DH35 117 aa2.3□□□□□ -2.04
VPS13B-209ENST00000521559 C2orf70A6NJV1 201 aa2.3□□□□□ -2.04
VPS13B-209ENST00000521559 ZFP92A6NM28 416 aa2.3□□□□□ -2.04
VPS13B-209ENST00000521559 SEC14L6B5MCN3 397 aa2.3□□□□□ -2.04
VPS13B-209ENST00000521559 G3V3Q6 166 aa2.3□□□□□ -2.04
VPS13B-209ENST00000521559 NDUFA4O00483 81 aa2.3□□□□□ -2.04
VPS13B-209ENST00000521559 YIF1AO95070 293 aa2.3□□□□□ -2.04
VPS13B-209ENST00000521559 CFDP00746 253 aaPredicted RBP2.3□□□□□ -2.04
VPS13B-209ENST00000521559 C8orf88P0DMB2 117 aa2.3□□□□□ -2.04
VPS13B-209ENST00000521559 RPL12P30050 165 aaKnown RBP2.3□□□□□ -2.04
VPS13B-209ENST00000521559 NUP62P37198 522 aaPredicted RBP2.3□□□□□ -2.04
VPS13B-209ENST00000521559 INSL3P51460 131 aa2.3□□□□□ -2.04
VPS13B-209ENST00000521559 HBG1P69891 147 aa2.3□□□□□ -2.04
VPS13B-209ENST00000521559 HBG2P69892 147 aa2.3□□□□□ -2.04
VPS13B-209ENST00000521559 EWSR1Q01844 656 aaKnown RBP eCLIP2.3□□□□□ -2.04
VPS13B-209ENST00000521559 ZNF90Q03938 601 aa2.3□□□□□ -2.04
VPS13B-209ENST00000521559 AKR1C1Q04828 323 aa2.3□□□□□ -2.04
VPS13B-209ENST00000521559 BAXQ07812 192 aa2.3□□□□□ -2.04
VPS13B-209ENST00000521559 SLC38A11Q08AI6 406 aa2.3□□□□□ -2.04
VPS13B-209ENST00000521559 RAB31Q13636 194 aa2.3□□□□□ -2.04
VPS13B-209ENST00000521559 TOMM20LQ6UXN7 152 aa2.3□□□□□ -2.04
VPS13B-209ENST00000521559 UNQ9165/PRO28630Q6UXU0 137 aa2.3□□□□□ -2.04
VPS13B-209ENST00000521559 IL34Q6ZMJ4 242 aa2.3□□□□□ -2.04
VPS13B-209ENST00000521559 CYP2G1PQ6ZSU1 146 aa2.3□□□□□ -2.04
VPS13B-209ENST00000521559 ACOT7LQ6ZUV0 252 aa2.3□□□□□ -2.04
VPS13B-209ENST00000521559 ZNF546Q86UE3 836 aa2.3□□□□□ -2.04
VPS13B-209ENST00000521559 STX12Q86Y82 276 aa2.3□□□□□ -2.04
VPS13B-209ENST00000521559 TCTE3Q8IZS6 198 aa2.3□□□□□ -2.04
VPS13B-209ENST00000521559 OR9G4Q8NGQ1 327 aa2.3□□□□□ -2.04
VPS13B-209ENST00000521559 Q8WTZ3 238 aa2.3□□□□□ -2.04
VPS13B-209ENST00000521559 MARC2Q969Z3 335 aa2.3□□□□□ -2.04
VPS13B-209ENST00000521559 C20orf24Q9BUV8 137 aa2.3□□□□□ -2.04
VPS13B-209ENST00000521559 GPR61Q9BZJ8 451 aa2.3□□□□□ -2.04
VPS13B-209ENST00000521559 NPVFQ9HCQ7 196 aa2.3□□□□□ -2.04
VPS13B-209ENST00000521559 UQCC1Q9NVA1 299 aa2.3□□□□□ -2.04
VPS13B-209ENST00000521559 SIGLEC8Q9NYZ4 499 aa2.3□□□□□ -2.04
VPS13B-209ENST00000521559 MRPL27Q9P0M9 148 aaKnown RBP2.3□□□□□ -2.04
VPS13B-209ENST00000521559 SMPXQ9UHP9 88 aa2.3□□□□□ -2.04
VPS13B-209ENST00000521559 RNF24Q9Y225 148 aa2.3□□□□□ -2.04
VPS13B-209ENST00000521559 UFC1Q9Y3C8 167 aa2.3□□□□□ -2.04
VPS13B-209ENST00000521559 HSPB11Q9Y547 144 aa2.3□□□□□ -2.04
VPS13B-209ENST00000521559 PUS1Q9Y606 427 aaKnown RBP eCLIP2.3□□□□□ -2.04
VPS13B-209ENST00000521559 IGKV1OR2-108A0A075B7D4 117 aa2.29□□□□□ -2.04
VPS13B-209ENST00000521559 TRAV9-2A0A087WT02 112 aa2.29□□□□□ -2.04
VPS13B-209ENST00000521559 FXYD6-FXYD2A0A087WZ82 144 aa2.29□□□□□ -2.04
VPS13B-209ENST00000521559 TRAV25A0A0B4J276 109 aa2.29□□□□□ -2.04
VPS13B-209ENST00000521559 A0A1B0GVG6 124 aa2.29□□□□□ -2.04
VPS13B-209ENST00000521559 WI2-2373I1.2A0A1W2PRP0 233 aa2.29□□□□□ -2.04
VPS13B-209ENST00000521559 TMEM213A2RRL7 107 aa2.29□□□□□ -2.04
VPS13B-209ENST00000521559 SMCO3A2RU48 225 aa2.29□□□□□ -2.04
VPS13B-209ENST00000521559 HMSDA8MTL9 139 aa2.29□□□□□ -2.04
VPS13B-209ENST00000521559 A8MWP6 167 aa2.29□□□□□ -2.04
VPS13B-209ENST00000521559 F8WDY8 70 aa2.29□□□□□ -2.04
VPS13B-209ENST00000521559 SMLR1H3BR10 107 aa2.29□□□□□ -2.04
VPS13B-209ENST00000521559 H3BTX0 84 aa2.29□□□□□ -2.04
VPS13B-209ENST00000521559 AGPAT2O15120 278 aa2.29□□□□□ -2.04
VPS13B-209ENST00000521559 MPDU1O75352 247 aa2.29□□□□□ -2.04
VPS13B-209ENST00000521559 HYPMO75409 117 aa2.29□□□□□ -2.04
VPS13B-209ENST00000521559 IFNA5P01569 189 aa2.29□□□□□ -2.04
VPS13B-209ENST00000521559 LINC00869P0C866 280 aa2.29□□□□□ -2.04
VPS13B-209ENST00000521559 IGLL1P15814 213 aa2.29□□□□□ -2.04
VPS13B-209ENST00000521559 CBLN1P23435 193 aa2.29□□□□□ -2.04
VPS13B-209ENST00000521559 NPPCP23582 126 aa2.29□□□□□ -2.04
VPS13B-209ENST00000521559 CRYBB3P26998 211 aa2.29□□□□□ -2.04
VPS13B-209ENST00000521559 BMI1P35226 326 aa2.29□□□□□ -2.04
VPS13B-209ENST00000521559 AP2S1P53680 142 aaPredicted RBP2.29□□□□□ -2.04
VPS13B-209ENST00000521559 PLP1P60201 277 aa2.29□□□□□ -2.04
VPS13B-209ENST00000521559 SELENOTP62341 195 aa2.29□□□□□ -2.04
VPS13B-209ENST00000521559 OR2F1Q13607 317 aa2.29□□□□□ -2.04
VPS13B-209ENST00000521559 CLINT1Q14677 625 aa2.29□□□□□ -2.04
VPS13B-209ENST00000521559 DEFB114Q30KQ6 69 aa2.29□□□□□ -2.04
VPS13B-209ENST00000521559 LINC00242Q5T6M2 205 aa2.29□□□□□ -2.04
VPS13B-209ENST00000521559 ATRAIDQ6UW56 229 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms