RNA–Protein interactions for RNA: ENST00000518428.1

AC048387.1-201, humanhuman

TSL 3 BASIC

Gene AC048387.1, Length 494 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC048387.1-201ENST00000518428 RPS28P62857 69 aaKnown RBP3.21□□□□□ -1.9
AC048387.1-201ENST00000518428 TMEM69Q5SWH9 247 aa3.21□□□□□ -1.9
AC048387.1-201ENST00000518428 ZNF322Q6U7Q0 402 aaPredicted RBP3.21□□□□□ -1.9
AC048387.1-201ENST00000518428 SDIM1Q6ZPB5 146 aa3.21□□□□□ -1.9
AC048387.1-201ENST00000518428 LCA10Q71F78 164 aa3.21□□□□□ -1.9
AC048387.1-201ENST00000518428 TMEM86AQ8N2M4 240 aa3.21□□□□□ -1.9
AC048387.1-201ENST00000518428 OR4D11Q8NGI4 311 aa3.21□□□□□ -1.9
AC048387.1-201ENST00000518428 DERL1Q9BUN8 251 aa3.21□□□□□ -1.9
AC048387.1-201ENST00000518428 MND1Q9BWT6 205 aa3.21□□□□□ -1.9
AC048387.1-201ENST00000518428 XAGE1AQ9HD64 81 aa3.21□□□□□ -1.9
AC048387.1-201ENST00000518428 SPANXCQ9NY87 97 aa3.21□□□□□ -1.9
AC048387.1-201ENST00000518428 LAMTOR3Q9UHA4 124 aa3.21□□□□□ -1.9
AC048387.1-201ENST00000518428 S4R3C0 116 aa3.21□□□□□ -1.9
AC048387.1-201ENST00000518428 PTPRJQ12913 1337 aa3.2□□□□□ -1.9
AC048387.1-201ENST00000518428 TNRC6AQ8NDV7 1962 aaKnown RBP3.2□□□□□ -1.9
AC048387.1-201ENST00000518428 GRIFINA4D1Z8 144 aa3.2□□□□□ -1.9
AC048387.1-201ENST00000518428 C19orf71A6NCJ1 209 aa3.2□□□□□ -1.9
AC048387.1-201ENST00000518428 TRAPPC2LH3BP13 241 aa3.2□□□□□ -1.9
AC048387.1-201ENST00000518428 C19orf84I3L1E1 186 aa3.2□□□□□ -1.9
AC048387.1-201ENST00000518428 DEGS1O15121 323 aa3.2□□□□□ -1.9
AC048387.1-201ENST00000518428 IGHV1-69P01742 117 aa3.2□□□□□ -1.9
AC048387.1-201ENST00000518428 IGHV3-53P01767 116 aa3.2□□□□□ -1.9
AC048387.1-201ENST00000518428 RPL7P18124 248 aaKnown RBP3.2□□□□□ -1.9
AC048387.1-201ENST00000518428 CASP1P29466 404 aa3.2□□□□□ -1.9
AC048387.1-201ENST00000518428 AKR1C3P42330 323 aa3.2□□□□□ -1.9
AC048387.1-201ENST00000518428 TAS2R30P59541 319 aa3.2□□□□□ -1.9
AC048387.1-201ENST00000518428 SPCS2Q15005 226 aa3.2□□□□□ -1.9
AC048387.1-201ENST00000518428 DEFB109BQ30KR1 87 aa3.2□□□□□ -1.9
AC048387.1-201ENST00000518428 KTN1-AS1Q86SY8 53 aa3.2□□□□□ -1.9
AC048387.1-201ENST00000518428 ZNF695Q8IW36 515 aa3.2□□□□□ -1.9
AC048387.1-201ENST00000518428 ZNF561Q8N587 486 aa3.2□□□□□ -1.9
AC048387.1-201ENST00000518428 CNEP1R1Q8N9A8 125 aa3.2□□□□□ -1.9
AC048387.1-201ENST00000518428 OR5C1Q8NGR4 320 aa3.2□□□□□ -1.9
AC048387.1-201ENST00000518428 MUC7Q8TAX7 377 aa3.2□□□□□ -1.9
AC048387.1-201ENST00000518428 ADAT3Q96EY9 351 aaPredicted RBP3.2□□□□□ -1.9
AC048387.1-201ENST00000518428 SEC22CQ9BRL7 303 aa3.2□□□□□ -1.9
AC048387.1-201ENST00000518428 DOHHQ9BU89 302 aa3.2□□□□□ -1.9
AC048387.1-201ENST00000518428 VCXQ9H320 206 aa3.2□□□□□ -1.9
AC048387.1-201ENST00000518428 SMDT1Q9H4I9 107 aa3.2□□□□□ -1.9
AC048387.1-201ENST00000518428 C16orf95Q9H693 158 aa3.2□□□□□ -1.9
AC048387.1-201ENST00000518428 MCTS1Q9ULC4 181 aaKnown RBP3.2□□□□□ -1.9
AC048387.1-201ENST00000518428 ZNF443Q9Y2A4 671 aaPredicted RBP3.2□□□□□ -1.9
AC048387.1-201ENST00000518428 CACNA1CQ13936 2221 aa3.2□□□□□ -1.9
AC048387.1-201ENST00000518428 NUP214P35658 2090 aaPredicted RBP3.2□□□□□ -1.9
AC048387.1-201ENST00000518428 TENM3Q9P273 2699 aa3.19□□□□□ -1.9
AC048387.1-201ENST00000518428 LYSTQ99698 3801 aa3.19□□□□□ -1.9
AC048387.1-201ENST00000518428 C7orf66A4D0T2 115 aa3.19□□□□□ -1.9
AC048387.1-201ENST00000518428 BUB1B-PAK6H3BSN5 160 aa3.19□□□□□ -1.9
AC048387.1-201ENST00000518428 LEPROTO15243 131 aa3.19□□□□□ -1.9
AC048387.1-201ENST00000518428 NDUFA2O43678 99 aa3.19□□□□□ -1.9
AC048387.1-201ENST00000518428 ZNF73O43830 326 aaPredicted RBP3.19□□□□□ -1.9
AC048387.1-201ENST00000518428 FAM107AO95990 144 aa3.19□□□□□ -1.9
AC048387.1-201ENST00000518428 CA5AP35218 305 aa3.19□□□□□ -1.9
AC048387.1-201ENST00000518428 POLR2HP52434 150 aaKnown RBP3.19□□□□□ -1.9
AC048387.1-201ENST00000518428 FXYD7P58549 80 aa3.19□□□□□ -1.9
AC048387.1-201ENST00000518428 SMIM21Q3B7S5 101 aa3.19□□□□□ -1.9
AC048387.1-201ENST00000518428 LINC00483Q53H64 154 aa3.19□□□□□ -1.9
AC048387.1-201ENST00000518428 LCE1EQ5T753 118 aa3.19□□□□□ -1.9
AC048387.1-201ENST00000518428 ANGPTL5Q86XS5 388 aa3.19□□□□□ -1.9
AC048387.1-201ENST00000518428 WFDC11Q8NEX6 87 aa3.19□□□□□ -1.9
AC048387.1-201ENST00000518428 CLDND2Q8NHS1 167 aa3.19□□□□□ -1.9
AC048387.1-201ENST00000518428 TSC22D3Q99576 134 aa3.19□□□□□ -1.9
AC048387.1-201ENST00000518428 OR2J1Q9GZK6 312 aa3.19□□□□□ -1.9
AC048387.1-201ENST00000518428 TUBA4BQ9H853 241 aa3.19□□□□□ -1.9
AC048387.1-201ENST00000518428 PRR34Q9NV39 138 aa3.19□□□□□ -1.9
AC048387.1-201ENST00000518428 ASF1BQ9NVP2 202 aa3.19□□□□□ -1.9
AC048387.1-201ENST00000518428 PCTPQ9UKL6 214 aa3.19□□□□□ -1.9
AC048387.1-201ENST00000518428 AGRNO00468 2067 aa3.19□□□□□ -1.9
AC048387.1-201ENST00000518428 SCN1AP35498 2009 aa3.19□□□□□ -1.9
AC048387.1-201ENST00000518428 IGHV3OR16-8A0A075B7F1 116 aa3.18□□□□□ -1.9
AC048387.1-201ENST00000518428 IGHV3-73A0A0B4J1V6 119 aa3.18□□□□□ -1.9
AC048387.1-201ENST00000518428 ZNF98A6NK75 572 aa3.18□□□□□ -1.9
AC048387.1-201ENST00000518428 C1QAP02745 245 aa3.18□□□□□ -1.9
AC048387.1-201ENST00000518428 OGNP20774 298 aaKnown RBP3.18□□□□□ -1.9
AC048387.1-201ENST00000518428 RPS3P23396 243 aaKnown RBP eCLIP3.18□□□□□ -1.9
AC048387.1-201ENST00000518428 CD200P41217 278 aa3.18□□□□□ -1.9
AC048387.1-201ENST00000518428 CKS1BP61024 79 aa3.18□□□□□ -1.9
AC048387.1-201ENST00000518428 AP1S1P61966 158 aa3.18□□□□□ -1.9
AC048387.1-201ENST00000518428 RPL18Q07020 188 aaKnown RBP3.18□□□□□ -1.9
AC048387.1-201ENST00000518428 RRN3P1Q2M238 152 aa3.18□□□□□ -1.9
AC048387.1-201ENST00000518428 ZNF880Q6PDB4 577 aa3.18□□□□□ -1.9
AC048387.1-201ENST00000518428 TTTY13Q9BZ97 58 aa3.18□□□□□ -1.9
AC048387.1-201ENST00000518428 TP53TG3Q9ULZ0 132 aa3.18□□□□□ -1.9
AC048387.1-201ENST00000518428 CITO14578 2027 aa3.18□□□□□ -1.9
AC048387.1-201ENST00000518428 CHD3Q12873 2000 aaKnown RBP3.18□□□□□ -1.9
AC048387.1-201ENST00000518428 KIAA1109Q2LD37 5005 aa3.18□□□□□ -1.9
AC048387.1-201ENST00000518428 NCOA6Q14686 2063 aaPredicted RBP3.17□□□□□ -1.9
AC048387.1-201ENST00000518428 IGKV3D-20A0A0C4DH25 116 aa3.17□□□□□ -1.9
AC048387.1-201ENST00000518428 A0A1B0GX51 115 aa3.17□□□□□ -1.9
AC048387.1-201ENST00000518428 J3KT08 172 aa3.17□□□□□ -1.9
AC048387.1-201ENST00000518428 LPAR6P43657 344 aa3.17□□□□□ -1.9
AC048387.1-201ENST00000518428 HIST1H4AP62805 103 aaKnown RBP3.17□□□□□ -1.9
AC048387.1-201ENST00000518428 AKR1C1Q04828 323 aa3.17□□□□□ -1.9
AC048387.1-201ENST00000518428 OR8B8Q15620 311 aa3.17□□□□□ -1.9
AC048387.1-201ENST00000518428 OR8J3Q8NGG0 315 aa3.17□□□□□ -1.9
AC048387.1-201ENST00000518428 SMCR5Q8TEV8 140 aa3.17□□□□□ -1.9
AC048387.1-201ENST00000518428 SLAMF6Q96DU3 332 aa3.17□□□□□ -1.9
AC048387.1-201ENST00000518428 CARD19Q96LW7 228 aa3.17□□□□□ -1.9
AC048387.1-201ENST00000518428 RTL8AQ9BWD3 113 aa3.17□□□□□ -1.9
AC048387.1-201ENST00000518428 TMEM126AQ9H061 195 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms