RNA–Protein interactions for RNA: ENST00000511281.1

HMGB1P47-201, Transcript of high mobility group box 1 pseudogene 47, humanhuman

BASIC

Gene HMGB1P47, Length 589 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P47-201ENST00000511281 MED23Q9ULK4 1368 aa2.08□□□□□ -2.08
HMGB1P47-201ENST00000511281 KIAA1551Q9HCM1 1747 aa2.08□□□□□ -2.08
HMGB1P47-201ENST00000511281 ANKRD26Q9UPS8 1709 aa2.08□□□□□ -2.08
HMGB1P47-201ENST00000511281 UBR2Q8IWV8 1755 aa2.08□□□□□ -2.08
HMGB1P47-201ENST00000511281 C10orf71Q711Q0 1435 aa2.08□□□□□ -2.08
HMGB1P47-201ENST00000511281 TAF1LQ8IZX4 1826 aa2.07□□□□□ -2.08
HMGB1P47-201ENST00000511281 UBR3Q6ZT12 1888 aa2.07□□□□□ -2.08
HMGB1P47-201ENST00000511281 MRPS14O60783 128 aaKnown RBP2.07□□□□□ -2.08
HMGB1P47-201ENST00000511281 BANF1O75531 89 aa2.07□□□□□ -2.08
HMGB1P47-201ENST00000511281 PIAS1O75925 651 aa2.07□□□□□ -2.08
HMGB1P47-201ENST00000511281 CSN2P05814 226 aa2.07□□□□□ -2.08
HMGB1P47-201ENST00000511281 ASAH2BP0C7U1 165 aa2.07□□□□□ -2.08
HMGB1P47-201ENST00000511281 ESRGQ1W209 222 aa2.07□□□□□ -2.08
HMGB1P47-201ENST00000511281 TMEM78Q5T7P6 136 aa2.07□□□□□ -2.08
HMGB1P47-201ENST00000511281 PDZD9Q8IXQ8 264 aa2.07□□□□□ -2.08
HMGB1P47-201ENST00000511281 GPER1Q99527 375 aa2.07□□□□□ -2.08
HMGB1P47-201ENST00000511281 LINC00467Q9BRT7 94 aa2.07□□□□□ -2.08
HMGB1P47-201ENST00000511281 OR2J1Q9GZK6 312 aa2.07□□□□□ -2.08
HMGB1P47-201ENST00000511281 BCL2L10Q9HD36 194 aa2.07□□□□□ -2.08
HMGB1P47-201ENST00000511281 PCTPQ9UKL6 214 aa2.07□□□□□ -2.08
HMGB1P47-201ENST00000511281 N4BP2Q86UW6 1770 aaPredicted RBP2.07□□□□□ -2.08
HMGB1P47-201ENST00000511281 KCPQ6ZWJ8 1503 aa2.07□□□□□ -2.08
HMGB1P47-201ENST00000511281 HEATR5BQ9P2D3 2071 aa2.06□□□□□ -2.08
HMGB1P47-201ENST00000511281 MED12LQ86YW9 2145 aa2.06□□□□□ -2.08
HMGB1P47-201ENST00000511281 C4AP0C0L4 1744 aa2.06□□□□□ -2.08
HMGB1P47-201ENST00000511281 TJP1Q07157 1748 aa2.06□□□□□ -2.08
HMGB1P47-201ENST00000511281 TRAV1-1A0A0B4J248 108 aa2.06□□□□□ -2.08
HMGB1P47-201ENST00000511281 TMEM256-PLSCR3K7ERE1 68 aa2.06□□□□□ -2.08
HMGB1P47-201ENST00000511281 UBL3O95164 117 aa2.06□□□□□ -2.08
HMGB1P47-201ENST00000511281 RNASE3P12724 160 aaKnown RBP2.06□□□□□ -2.08
HMGB1P47-201ENST00000511281 TFAMQ00059 246 aaKnown RBP2.06□□□□□ -2.08
HMGB1P47-201ENST00000511281 C10orf55Q5SWW7 151 aa2.06□□□□□ -2.08
HMGB1P47-201ENST00000511281 SLC30A7Q8NEW0 376 aa2.06□□□□□ -2.08
HMGB1P47-201ENST00000511281 GPX7Q96SL4 187 aaPredicted RBP2.06□□□□□ -2.08
HMGB1P47-201ENST00000511281 MYH3P11055 1940 aa2.06□□□□□ -2.08
HMGB1P47-201ENST00000511281 PCDH15Q96QU1 1955 aa2.06□□□□□ -2.08
HMGB1P47-201ENST00000511281 MICAL3Q7RTP6 2002 aa2.06□□□□□ -2.08
HMGB1P47-201ENST00000511281 ZNF609O15014 1411 aa2.06□□□□□ -2.08
HMGB1P47-201ENST00000511281 DOCK4Q8N1I0 1966 aa2.05□□□□□ -2.08
HMGB1P47-201ENST00000511281 A8MWV9 139 aa2.05□□□□□ -2.08
HMGB1P47-201ENST00000511281 GPR31O00270 319 aa2.05□□□□□ -2.08
HMGB1P47-201ENST00000511281 NDUFB3O43676 98 aa2.05□□□□□ -2.08
HMGB1P47-201ENST00000511281 LYZL6O75951 148 aa2.05□□□□□ -2.08
HMGB1P47-201ENST00000511281 OGNP20774 298 aaKnown RBP2.05□□□□□ -2.08
HMGB1P47-201ENST00000511281 NFYBP25208 207 aa2.05□□□□□ -2.08
HMGB1P47-201ENST00000511281 SSR2P43308 183 aa2.05□□□□□ -2.08
HMGB1P47-201ENST00000511281 RHOGP84095 191 aa2.05□□□□□ -2.08
HMGB1P47-201ENST00000511281 LINC00311Q8N616 119 aa2.05□□□□□ -2.08
HMGB1P47-201ENST00000511281 NAA38Q9BRA0 125 aaKnown RBP2.05□□□□□ -2.08
HMGB1P47-201ENST00000511281 DDA1Q9BW61 102 aa2.05□□□□□ -2.08
HMGB1P47-201ENST00000511281 MED9Q9NWA0 146 aa2.05□□□□□ -2.08
HMGB1P47-201ENST00000511281 RTL9Q8NET4 1388 aa2.05□□□□□ -2.08
HMGB1P47-201ENST00000511281 ZNF831Q5JPB2 1677 aa2.05□□□□□ -2.08
HMGB1P47-201ENST00000511281 TRAV12-1A0A0B4J245 112 aa2.04□□□□□ -2.08
HMGB1P47-201ENST00000511281 A0A1B0GV72 72 aa2.04□□□□□ -2.08
HMGB1P47-201ENST00000511281 C2orf70A6NJV1 201 aa2.04□□□□□ -2.08
HMGB1P47-201ENST00000511281 OR1I1O60431 355 aa2.04□□□□□ -2.08
HMGB1P47-201ENST00000511281 CST8O60676 142 aa2.04□□□□□ -2.08
HMGB1P47-201ENST00000511281 PROSCO94903 275 aa2.04□□□□□ -2.08
HMGB1P47-201ENST00000511281 TRGC2P03986 189 aa2.04□□□□□ -2.08
HMGB1P47-201ENST00000511281 GLRXP35754 106 aa2.04□□□□□ -2.08
HMGB1P47-201ENST00000511281 INSL3P51460 131 aa2.04□□□□□ -2.08
HMGB1P47-201ENST00000511281 DYNLT3P51808 116 aa2.04□□□□□ -2.08
HMGB1P47-201ENST00000511281 ALX1Q15699 326 aa2.04□□□□□ -2.08
HMGB1P47-201ENST00000511281 Q8IYB0 196 aa2.04□□□□□ -2.08
HMGB1P47-201ENST00000511281 Q8N2B8 174 aa2.04□□□□□ -2.08
HMGB1P47-201ENST00000511281 TEX47Q8TBZ9 253 aa2.04□□□□□ -2.08
HMGB1P47-201ENST00000511281 ANP32BQ92688 251 aaKnown RBP2.04□□□□□ -2.08
HMGB1P47-201ENST00000511281 C14orf132Q9NPU4 83 aa2.04□□□□□ -2.08
HMGB1P47-201ENST00000511281 OR5AC2Q9NZP5 309 aa2.04□□□□□ -2.08
HMGB1P47-201ENST00000511281 GOLGB1Q14789 3259 aaKnown RBP2.04□□□□□ -2.08
HMGB1P47-201ENST00000511281 ALPK2Q86TB3 2170 aa2.03□□□□□ -2.08
HMGB1P47-201ENST00000511281 SCN11AQ9UI33 1791 aa2.03□□□□□ -2.08
HMGB1P47-201ENST00000511281 NRXN2Q9P2S2 1712 aa2.03□□□□□ -2.08
HMGB1P47-201ENST00000511281 TLCD2A6NGC4 264 aa2.03□□□□□ -2.08
HMGB1P47-201ENST00000511281 H3BQV1 296 aa2.03□□□□□ -2.08
HMGB1P47-201ENST00000511281 IFNA14P01570 189 aa2.03□□□□□ -2.08
HMGB1P47-201ENST00000511281 CRHP06850 196 aa2.03□□□□□ -2.08
HMGB1P47-201ENST00000511281 MGST1P10620 155 aaKnown RBP2.03□□□□□ -2.08
HMGB1P47-201ENST00000511281 HLA-EP13747 358 aa2.03□□□□□ -2.08
HMGB1P47-201ENST00000511281 SNCBQ16143 134 aa2.03□□□□□ -2.08
HMGB1P47-201ENST00000511281 LTC4SQ16873 150 aa2.03□□□□□ -2.08
HMGB1P47-201ENST00000511281 KRTAP21-3Q3LHN1 58 aa2.03□□□□□ -2.08
HMGB1P47-201ENST00000511281 SOSTDC1Q6X4U4 206 aa2.03□□□□□ -2.08
HMGB1P47-201ENST00000511281 ZNF418Q8TF45 676 aaPredicted RBP2.03□□□□□ -2.08
HMGB1P47-201ENST00000511281 ADAT1Q9BUB4 502 aaKnown RBP2.03□□□□□ -2.08
HMGB1P47-201ENST00000511281 LAMTOR3Q9UHA4 124 aa2.03□□□□□ -2.08
HMGB1P47-201ENST00000511281 EML6Q6ZMW3 1958 aa2.03□□□□□ -2.08
HMGB1P47-201ENST00000511281 ANAPC1Q9H1A4 1944 aa2.03□□□□□ -2.08
HMGB1P47-201ENST00000511281 ARFGEF1Q9Y6D6 1849 aa2.03□□□□□ -2.09
HMGB1P47-201ENST00000511281 TIAM2Q8IVF5 1701 aa2.03□□□□□ -2.09
HMGB1P47-201ENST00000511281 SCN7AQ01118 1682 aa2.02□□□□□ -2.09
HMGB1P47-201ENST00000511281 TNRC6CQ9HCJ0 1690 aaKnown RBP2.02□□□□□ -2.09
HMGB1P47-201ENST00000511281 TRAV5A0A0B4J249 113 aa2.02□□□□□ -2.09
HMGB1P47-201ENST00000511281 MAP1LC3B2A6NCE7 125 aa2.02□□□□□ -2.09
HMGB1P47-201ENST00000511281 TIMM17BO60830 172 aa2.02□□□□□ -2.09
HMGB1P47-201ENST00000511281 DR1Q01658 176 aa2.02□□□□□ -2.09
HMGB1P47-201ENST00000511281 MYL5Q02045 173 aa2.02□□□□□ -2.09
HMGB1P47-201ENST00000511281 RNASE10Q5GAN6 216 aaKnown RBP2.02□□□□□ -2.09
HMGB1P47-201ENST00000511281 DCUN1D2Q6PH85 259 aa2.02□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms