RNA–Protein interactions for RNA: ENST00000508474.5

UBE2D3-224, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 4,819 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-224ENST00000508474 NTN3O00634 580 aaPredicted RBP5.89□□□□□ -1.47
UBE2D3-224ENST00000508474 IGHV1-46P01743 117 aa5.89□□□□□ -1.47
UBE2D3-224ENST00000508474 GLMPQ8WWB7 406 aa5.89□□□□□ -1.47
UBE2D3-224ENST00000508474 MYOFQ9NZM1 2061 aa5.89□□□□□ -1.47
UBE2D3-224ENST00000508474 CCL21O00585 134 aa5.89□□□□□ -1.47
UBE2D3-224ENST00000508474 Q8NFD4 153 aa5.89□□□□□ -1.47
UBE2D3-224ENST00000508474 CITED2Q99967 270 aaPredicted RBP5.89□□□□□ -1.47
UBE2D3-224ENST00000508474 ZNF71Q9NQZ8 489 aaPredicted RBP5.89□□□□□ -1.47
UBE2D3-224ENST00000508474 DOCK6Q96HP0 2047 aa5.89□□□□□ -1.47
UBE2D3-224ENST00000508474 LRRK1Q38SD2 2015 aa5.89□□□□□ -1.47
UBE2D3-224ENST00000508474 TRBV7-1A0A0A6YYK4 115 aa5.89□□□□□ -1.47
UBE2D3-224ENST00000508474 PRR19A6NJB7 356 aa5.89□□□□□ -1.47
UBE2D3-224ENST00000508474 WFDC2Q14508 124 aa5.89□□□□□ -1.47
UBE2D3-224ENST00000508474 RBMY1FQ15415 496 aaKnown RBP5.89□□□□□ -1.47
UBE2D3-224ENST00000508474 TMEM200BQ69YZ2 307 aa5.89□□□□□ -1.47
UBE2D3-224ENST00000508474 PRR25Q96S07 402 aa5.89□□□□□ -1.47
UBE2D3-224ENST00000508474 PIMREGQ9BSJ6 248 aa5.89□□□□□ -1.47
UBE2D3-224ENST00000508474 MYLKQ15746 1914 aa5.89□□□□□ -1.47
UBE2D3-224ENST00000508474 J3QQQ9 107 aa5.88□□□□□ -1.47
UBE2D3-224ENST00000508474 NDUFC2O95298 119 aa5.88□□□□□ -1.47
UBE2D3-224ENST00000508474 SYNJ2BPP57105 145 aa5.88□□□□□ -1.47
UBE2D3-224ENST00000508474 IL17RELQ6ZVW7 336 aa5.88□□□□□ -1.47
UBE2D3-224ENST00000508474 PRIMA1Q86XR5 153 aa5.88□□□□□ -1.47
UBE2D3-224ENST00000508474 C8orf49Q96NF6 230 aa5.88□□□□□ -1.47
UBE2D3-224ENST00000508474 DOCK11Q5JSL3 2073 aa5.88□□□□□ -1.47
UBE2D3-224ENST00000508474 IGKV1D-17A0A075B6S4 117 aa5.88□□□□□ -1.47
UBE2D3-224ENST00000508474 MALP21145 153 aa5.88□□□□□ -1.47
UBE2D3-224ENST00000508474 MORN5Q5VZ52 161 aa5.88□□□□□ -1.47
UBE2D3-224ENST00000508474 C9orf106Q8NAJ2 232 aa5.88□□□□□ -1.47
UBE2D3-224ENST00000508474 VWCEQ96DN2 955 aa5.88□□□□□ -1.47
UBE2D3-224ENST00000508474 RALGAPA1Q6GYQ0 2036 aa5.88□□□□□ -1.47
UBE2D3-224ENST00000508474 A0A1W2PPI3 338 aa5.88□□□□□ -1.47
UBE2D3-224ENST00000508474 ATP5G1P05496 136 aa5.88□□□□□ -1.47
UBE2D3-224ENST00000508474 LINC00205P59089 165 aa5.88□□□□□ -1.47
UBE2D3-224ENST00000508474 BSPH1Q075Z2 132 aa5.88□□□□□ -1.47
UBE2D3-224ENST00000508474 LY6EQ16553 131 aa5.88□□□□□ -1.47
UBE2D3-224ENST00000508474 ZC2HC1AQ96GY0 325 aa5.88□□□□□ -1.47
UBE2D3-224ENST00000508474 GAFA1Q96PS6 74 aa5.88□□□□□ -1.47
UBE2D3-224ENST00000508474 HS3ST6Q96QI5 342 aa5.88□□□□□ -1.47
UBE2D3-224ENST00000508474 JPT2Q9H910 190 aa5.88□□□□□ -1.47
UBE2D3-224ENST00000508474 H3BRN7 92 aa5.87□□□□□ -1.47
UBE2D3-224ENST00000508474 FOXG1P55316 489 aaPredicted RBP5.87□□□□□ -1.47
UBE2D3-224ENST00000508474 FAM27E3Q08E93 113 aa5.87□□□□□ -1.47
UBE2D3-224ENST00000508474 FOXC1Q12948 553 aa5.87□□□□□ -1.47
UBE2D3-224ENST00000508474 C15orf32Q32M92 178 aa5.87□□□□□ -1.47
UBE2D3-224ENST00000508474 C17orf82Q86X59 251 aaPredicted RBP5.87□□□□□ -1.47
UBE2D3-224ENST00000508474 LYPD6Q86Y78 171 aa5.87□□□□□ -1.47
UBE2D3-224ENST00000508474 YPEL4Q96NS1 127 aa5.87□□□□□ -1.47
UBE2D3-224ENST00000508474 PEMTQ9UBM1 199 aa5.87□□□□□ -1.47
UBE2D3-224ENST00000508474 TRPM7Q96QT4 1865 aa5.87□□□□□ -1.47
UBE2D3-224ENST00000508474 SRRM4A7MD48 611 aaKnown RBP5.87□□□□□ -1.47
UBE2D3-224ENST00000508474 DTX2Q86UW9 622 aa5.87□□□□□ -1.47
UBE2D3-224ENST00000508474 FAM168AQ92567 244 aa5.87□□□□□ -1.47
UBE2D3-224ENST00000508474 RNF166Q96A37 237 aaPredicted RBP5.87□□□□□ -1.47
UBE2D3-224ENST00000508474 IGKV1-16P04430 117 aa5.87□□□□□ -1.47
UBE2D3-224ENST00000508474 SRSF2Q01130 221 aaKnown RBP5.87□□□□□ -1.47
UBE2D3-224ENST00000508474 ZFP36L1Q07352 338 aaKnown RBP5.87□□□□□ -1.47
UBE2D3-224ENST00000508474 C5orf64Q2M2E5 130 aa5.87□□□□□ -1.47
UBE2D3-224ENST00000508474 IGF2BP2-AS1Q96M15 143 aa5.87□□□□□ -1.47
UBE2D3-224ENST00000508474 B3GALT5-AS1P59052 145 aa5.87□□□□□ -1.47
UBE2D3-224ENST00000508474 RPL36AP83881 106 aaKnown RBP5.87□□□□□ -1.47
UBE2D3-224ENST00000508474 MINOS1Q5TGZ0 78 aa5.87□□□□□ -1.47
UBE2D3-224ENST00000508474 SPATA12Q7Z6I5 190 aa5.87□□□□□ -1.47
UBE2D3-224ENST00000508474 DTX1Q86Y01 620 aa5.87□□□□□ -1.47
UBE2D3-224ENST00000508474 RPL36ALQ969Q0 106 aaKnown RBP5.87□□□□□ -1.47
UBE2D3-224ENST00000508474 MINOS1-NBL1R4GNA1 71 aa5.87□□□□□ -1.47
UBE2D3-224ENST00000508474 CABIN1Q9Y6J0 2220 aa5.86□□□□□ -1.47
UBE2D3-224ENST00000508474 TRGV2A0A075B6R0 118 aa5.86□□□□□ -1.47
UBE2D3-224ENST00000508474 TRAV13-2A0A0B4J235 113 aa5.86□□□□□ -1.47
UBE2D3-224ENST00000508474 I3L3M4 83 aa5.86□□□□□ -1.47
UBE2D3-224ENST00000508474 FXYD2P54710 66 aa5.86□□□□□ -1.47
UBE2D3-224ENST00000508474 ZNF415Q09FC8 603 aa5.86□□□□□ -1.47
UBE2D3-224ENST00000508474 ERCC8Q13216 396 aa5.86□□□□□ -1.47
UBE2D3-224ENST00000508474 CRIPAKQ8N1N5 446 aa5.86□□□□□ -1.47
UBE2D3-224ENST00000508474 NDUFA12Q9UI09 145 aa5.86□□□□□ -1.47
UBE2D3-224ENST00000508474 ZNF833PQ6ZTB9 187 aa5.86□□□□□ -1.47
UBE2D3-224ENST00000508474 SSC4DQ8WTU2 575 aa5.86□□□□□ -1.47
UBE2D3-224ENST00000508474 C1orf43Q9BWL3 253 aa5.86□□□□□ -1.47
UBE2D3-224ENST00000508474 IGHV1-69DA0A0B4J2H0 117 aa5.86□□□□□ -1.47
UBE2D3-224ENST00000508474 PINLYPA6NC86 204 aa5.86□□□□□ -1.47
UBE2D3-224ENST00000508474 ANXA2RQ3ZCQ2 193 aa5.86□□□□□ -1.47
UBE2D3-224ENST00000508474 ZNF493Q6ZR52 646 aa5.86□□□□□ -1.47
UBE2D3-224ENST00000508474 ITLN2Q8WWU7 325 aaPredicted RBP5.86□□□□□ -1.47
UBE2D3-224ENST00000508474 POLR2AP24928 1970 aaKnown RBP5.86□□□□□ -1.47
UBE2D3-224ENST00000508474 A0A0B4J2C4 111 aa5.86□□□□□ -1.47
UBE2D3-224ENST00000508474 BUB1B-PAK6H3BSN5 160 aa5.86□□□□□ -1.47
UBE2D3-224ENST00000508474 CMC4P56277 68 aaPredicted RBP5.86□□□□□ -1.47
UBE2D3-224ENST00000508474 RPL32P62910 135 aaKnown RBP5.86□□□□□ -1.47
UBE2D3-224ENST00000508474 FAM120AOSQ5T036 256 aa5.85□□□□□ -1.47
UBE2D3-224ENST00000508474 Q6ZSR3 168 aa5.85□□□□□ -1.47
UBE2D3-224ENST00000508474 LINC00173Q6ZV60 143 aa5.85□□□□□ -1.47
UBE2D3-224ENST00000508474 MRAPQ8TCY5 172 aa5.85□□□□□ -1.47
UBE2D3-224ENST00000508474 C11orf1Q9H5F2 150 aa5.85□□□□□ -1.47
UBE2D3-224ENST00000508474 PRDM6Q9NQX0 595 aa5.85□□□□□ -1.47
UBE2D3-224ENST00000508474 TRAV41A0A0B4J266 112 aa5.85□□□□□ -1.47
UBE2D3-224ENST00000508474 TMEM178BH3BS89 294 aa5.85□□□□□ -1.47
UBE2D3-224ENST00000508474 ZNF883P0CG24 379 aa5.85□□□□□ -1.47
UBE2D3-224ENST00000508474 ZNF625Q96I27 306 aaPredicted RBP5.85□□□□□ -1.47
UBE2D3-224ENST00000508474 TRAV12-1A0A0B4J245 112 aa5.85□□□□□ -1.47
UBE2D3-224ENST00000508474 C5orf47Q569G3 176 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 110.1 ms