RNA–Protein interactions for RNA: ENST00000505397.1

LIN54-204, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIN54, Length 2,742 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-204ENST00000505397 MED13LQ71F56 2210 aa13.24□□□□□ -0.29
LIN54-204ENST00000505397 KLF17Q5JT82 389 aaPredicted RBP13.24□□□□□ -0.29
LIN54-204ENST00000505397 BCL6BQ8N143 479 aaPredicted RBP13.24□□□□□ -0.29
LIN54-204ENST00000505397 MAP1LC3CQ9BXW4 147 aa13.24□□□□□ -0.29
LIN54-204ENST00000505397 SIRPDQ9H106 197 aa13.24□□□□□ -0.29
LIN54-204ENST00000505397 C5orf64Q2M2E5 130 aa13.24□□□□□ -0.29
LIN54-204ENST00000505397 TMEM191AQ9H0A3 160 aa13.24□□□□□ -0.29
LIN54-204ENST00000505397 ABCA1O95477 2261 aa13.23□□□□□ -0.29
LIN54-204ENST00000505397 M0R3E3 92 aa13.23□□□□□ -0.29
LIN54-204ENST00000505397 HSPB8Q9UJY1 196 aa13.23□□□□□ -0.29
LIN54-204ENST00000505397 hDV102S1A0JD36 115 aa13.23□□□□□ -0.29
LIN54-204ENST00000505397 ATP5J2P56134 94 aa13.23□□□□□ -0.29
LIN54-204ENST00000505397 HES1Q14469 280 aa13.23□□□□□ -0.29
LIN54-204ENST00000505397 COX8CQ7Z4L0 72 aa13.23□□□□□ -0.29
LIN54-204ENST00000505397 S100A7AQ86SG5 101 aa13.23□□□□□ -0.29
LIN54-204ENST00000505397 COX11Q9Y6N1 276 aa13.23□□□□□ -0.29
LIN54-204ENST00000505397 GNG7O60262 68 aa13.22□□□□□ -0.29
LIN54-204ENST00000505397 MINOS1Q5TGZ0 78 aa13.22□□□□□ -0.29
LIN54-204ENST00000505397 CLEC2AQ6UVW9 174 aa13.22□□□□□ -0.29
LIN54-204ENST00000505397 UNQ5815/PRO19632Q6UWF5 114 aa13.22□□□□□ -0.29
LIN54-204ENST00000505397 TTC9CQ8N5M4 171 aa13.22□□□□□ -0.29
LIN54-204ENST00000505397 C8orf49Q96NF6 230 aa13.22□□□□□ -0.29
LIN54-204ENST00000505397 MINOS1-NBL1R4GNA1 71 aa13.22□□□□□ -0.29
LIN54-204ENST00000505397 SERTM2A0A1B0GWG4 89 aa13.22□□□□□ -0.29
LIN54-204ENST00000505397 OOSP1A8MZH6 123 aa13.22□□□□□ -0.29
LIN54-204ENST00000505397 MFAP4P55083 255 aa13.22□□□□□ -0.29
LIN54-204ENST00000505397 ZNF562Q6V9R5 426 aa13.22□□□□□ -0.29
LIN54-204ENST00000505397 NDUFS8O00217 210 aa13.21□□□□□ -0.29
LIN54-204ENST00000505397 LINC01545Q5VT33 79 aa13.21□□□□□ -0.29
LIN54-204ENST00000505397 ARL6IP6Q8N6S5 226 aa13.21□□□□□ -0.29
LIN54-204ENST00000505397 S4R3C0 116 aa13.21□□□□□ -0.29
LIN54-204ENST00000505397 SCRT2Q9NQ03 307 aa13.21□□□□□ -0.29
LIN54-204ENST00000505397 AP5S1Q9NUS5 200 aa13.21□□□□□ -0.29
LIN54-204ENST00000505397 COX6B1P14854 86 aa13.2□□□□□ -0.3
LIN54-204ENST00000505397 AAMDCQ9H7C9 122 aa13.2□□□□□ -0.3
LIN54-204ENST00000505397 TP73-AS1Q9UF72 201 aa13.2□□□□□ -0.3
LIN54-204ENST00000505397 U3KQK5 164 aa13.2□□□□□ -0.3
LIN54-204ENST00000505397 CSN3P07498 182 aa13.2□□□□□ -0.3
LIN54-204ENST00000505397 PRB4P10163 310 aaPredicted RBP13.2□□□□□ -0.3
LIN54-204ENST00000505397 Q8N6K4 173 aa13.2□□□□□ -0.3
LIN54-204ENST00000505397 ZNF738Q8NE65 137 aa13.2□□□□□ -0.3
LIN54-204ENST00000505397 ZNF747Q9BV97 191 aa13.2□□□□□ -0.3
LIN54-204ENST00000505397 MS4A6AQ9H2W1 248 aa13.2□□□□□ -0.3
LIN54-204ENST00000505397 CCL25O15444 150 aa13.19□□□□□ -0.3
LIN54-204ENST00000505397 TCF21O43680 179 aa13.19□□□□□ -0.3
LIN54-204ENST00000505397 NDPQ00604 133 aa13.19□□□□□ -0.3
LIN54-204ENST00000505397 Q6ZVH6 145 aa13.19□□□□□ -0.3
LIN54-204ENST00000505397 C10orf105Q8TEF2 133 aa13.19□□□□□ -0.3
LIN54-204ENST00000505397 ARPC1AQ92747 370 aa13.19□□□□□ -0.3
LIN54-204ENST00000505397 FAM208BQ5VWN6 2430 aa13.19□□□□□ -0.3
LIN54-204ENST00000505397 CT45A10P0DMU9 189 aa13.19□□□□□ -0.3
LIN54-204ENST00000505397 UBE2E1P51965 193 aa13.19□□□□□ -0.3
LIN54-204ENST00000505397 PSG9Q00887 426 aa13.19□□□□□ -0.3
LIN54-204ENST00000505397 ASH1LQ9NR48 2969 aaKnown RBP13.19□□□□□ -0.3
LIN54-204ENST00000505397 SLC25A34Q6PIV7 304 aa13.19□□□□□ -0.3
LIN54-204ENST00000505397 C21orf62Q9NYP8 219 aa13.19□□□□□ -0.3
LIN54-204ENST00000505397 EBI3Q14213 229 aa13.18□□□□□ -0.3
LIN54-204ENST00000505397 SPG11Q96JI7 2443 aa13.18□□□□□ -0.3
LIN54-204ENST00000505397 HSBP1L1C9JCN9 74 aa13.18□□□□□ -0.3
LIN54-204ENST00000505397 UBE2V1Q13404 147 aa13.18□□□□□ -0.3
LIN54-204ENST00000505397 LYZL1Q6UWQ5 148 aa13.18□□□□□ -0.3
LIN54-204ENST00000505397 DYNAPQ8N1N2 210 aa13.18□□□□□ -0.3
LIN54-204ENST00000505397 A1L4Q6 167 aa13.17□□□□□ -0.3
LIN54-204ENST00000505397 SH2D1AO60880 128 aa13.17□□□□□ -0.3
LIN54-204ENST00000505397 CSN1S1P47710 185 aa13.17□□□□□ -0.3
LIN54-204ENST00000505397 MPV17L2Q567V2 206 aa13.17□□□□□ -0.3
LIN54-204ENST00000505397 MCRIP2Q9BUT9 160 aaKnown RBP13.17□□□□□ -0.3
LIN54-204ENST00000505397 A0A096LNJ9 63 aa13.17□□□□□ -0.3
LIN54-204ENST00000505397 IGHV4-61A0A0C4DH41 118 aa13.17□□□□□ -0.3
LIN54-204ENST00000505397 TMEM189A5PLL7 270 aa13.17□□□□□ -0.3
LIN54-204ENST00000505397 OR10AG1Q8NH19 301 aa13.17□□□□□ -0.3
LIN54-204ENST00000505397 LRRK2Q5S007 2527 aa13.16□□□□□ -0.3
LIN54-204ENST00000505397 RPL7P18124 248 aaKnown RBP13.16□□□□□ -0.3
LIN54-204ENST00000505397 FAM104BQ5XKR9 115 aa13.16□□□□□ -0.3
LIN54-204ENST00000505397 PRSS3P2Q8NHM4 247 aa13.16□□□□□ -0.3
LIN54-204ENST00000505397 UBR5O95071 2799 aaPredicted RBP13.16□□□□□ -0.3
LIN54-204ENST00000505397 FBLL1A6NHQ2 334 aaKnown RBP13.16□□□□□ -0.3
LIN54-204ENST00000505397 PTTG1IPP53801 180 aa13.16□□□□□ -0.3
LIN54-204ENST00000505397 SAPCD1Q5SSQ6 148 aa13.16□□□□□ -0.3
LIN54-204ENST00000505397 BVES-AS1Q5T3Y7 98 aa13.16□□□□□ -0.3
LIN54-204ENST00000505397 FA2HQ7L5A8 372 aa13.16□□□□□ -0.3
LIN54-204ENST00000505397 PRR25Q96S07 402 aa13.16□□□□□ -0.3
LIN54-204ENST00000505397 TPPP3Q9BW30 176 aa13.16□□□□□ -0.3
LIN54-204ENST00000505397 THYN1Q9P016 225 aa13.16□□□□□ -0.3
LIN54-204ENST00000505397 NCBP2LA6PVI3 153 aaKnown RBP13.15□□□□□ -0.3
LIN54-204ENST00000505397 CTSGP08311 255 aa13.15□□□□□ -0.3
LIN54-204ENST00000505397 EGR2P11161 476 aaPredicted RBP13.15□□□□□ -0.3
LIN54-204ENST00000505397 IFI27P40305 119 aaPredicted RBP13.15□□□□□ -0.3
LIN54-204ENST00000505397 SMAD5-AS1Q9Y6J3 95 aa13.15□□□□□ -0.3
LIN54-204ENST00000505397 TMEM213A2RRL7 107 aa13.15□□□□□ -0.3
LIN54-204ENST00000505397 D6R8Y8 96 aa13.15□□□□□ -0.3
LIN54-204ENST00000505397 IGHG4P01861 327 aa13.15□□□□□ -0.3
LIN54-204ENST00000505397 FAM106CPP0CH98 169 aa13.15□□□□□ -0.3
LIN54-204ENST00000505397 TMEM11P17152 192 aa13.15□□□□□ -0.3
LIN54-204ENST00000505397 SAA4P35542 130 aa13.15□□□□□ -0.3
LIN54-204ENST00000505397 SRSF1Q07955 248 aaKnown RBP eCLIP13.15□□□□□ -0.3
LIN54-204ENST00000505397 FAM106AQ4KMX7 169 aa13.15□□□□□ -0.3
LIN54-204ENST00000505397 ZNF575Q86XF7 245 aa13.15□□□□□ -0.3
LIN54-204ENST00000505397 ABCA2Q9BZC7 2435 aa13.15□□□□□ -0.3
LIN54-204ENST00000505397 IGKV2-40A0A087WW87 121 aaPredicted RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms