RNA–Protein interactions for RNA: ENST00000505315.1

HMGB1P22-201, Transcript of high mobility group box 1 pseudogene 22, humanhuman

BASIC

Gene HMGB1P22, Length 124 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P22-201ENST00000505315 EDF1O60869 148 aaKnown RBP2.11□□□□□ -2.07
HMGB1P22-201ENST00000505315 KRTAP11-1Q8IUC1 163 aa2.11□□□□□ -2.07
HMGB1P22-201ENST00000505315 PSMF1Q92530 271 aa2.11□□□□□ -2.07
HMGB1P22-201ENST00000505315 LINC00167Q96N53 147 aa2.11□□□□□ -2.07
HMGB1P22-201ENST00000505315 SEC11CQ9BY50 192 aa2.11□□□□□ -2.07
HMGB1P22-201ENST00000505315 NUP210LQ5VU65 1888 aa2.11□□□□□ -2.07
HMGB1P22-201ENST00000505315 SCN4AP35499 1836 aa2.1□□□□□ -2.07
HMGB1P22-201ENST00000505315 CNTLNQ9NXG0 1405 aa2.1□□□□□ -2.07
HMGB1P22-201ENST00000505315 ADGRL1O94910 1474 aa2.1□□□□□ -2.07
HMGB1P22-201ENST00000505315 IGKV2-24A0A0C4DH68 120 aa2.1□□□□□ -2.07
HMGB1P22-201ENST00000505315 A8MU10 97 aa2.1□□□□□ -2.07
HMGB1P22-201ENST00000505315 B4DSR2 109 aa2.1□□□□□ -2.07
HMGB1P22-201ENST00000505315 C5orf67F2Z3F1 127 aa2.1□□□□□ -2.07
HMGB1P22-201ENST00000505315 CCDC179H3BU77 68 aa2.1□□□□□ -2.07
HMGB1P22-201ENST00000505315 IGKV3-11P04433 115 aa2.1□□□□□ -2.07
HMGB1P22-201ENST00000505315 KRTAP1-4P0C5Y4 121 aa2.1□□□□□ -2.07
HMGB1P22-201ENST00000505315 LINC00315P59091 139 aa2.1□□□□□ -2.07
HMGB1P22-201ENST00000505315 ROMO1P60602 79 aa2.1□□□□□ -2.07
HMGB1P22-201ENST00000505315 LINC01545Q5VT33 79 aa2.1□□□□□ -2.07
HMGB1P22-201ENST00000505315 TEX261Q6UWH6 196 aa2.1□□□□□ -2.07
HMGB1P22-201ENST00000505315 C2orf82Q6UX34 121 aa2.1□□□□□ -2.07
HMGB1P22-201ENST00000505315 IGFL3Q6UXB1 125 aa2.1□□□□□ -2.07
HMGB1P22-201ENST00000505315 CASC2Q6XLA1 102 aa2.1□□□□□ -2.07
HMGB1P22-201ENST00000505315 Q6ZUT4 128 aa2.1□□□□□ -2.07
HMGB1P22-201ENST00000505315 GKN2Q86XP6 184 aa2.1□□□□□ -2.07
HMGB1P22-201ENST00000505315 C20orf166-AS1Q96NR2 134 aa2.1□□□□□ -2.07
HMGB1P22-201ENST00000505315 Q9BRP9 147 aa2.1□□□□□ -2.07
HMGB1P22-201ENST00000505315 KRTAP1-5Q9BYS1 174 aa2.1□□□□□ -2.07
HMGB1P22-201ENST00000505315 PSORS1C2Q9UIG4 136 aa2.1□□□□□ -2.07
HMGB1P22-201ENST00000505315 NOP16Q9Y3C1 178 aaKnown RBP2.1□□□□□ -2.07
HMGB1P22-201ENST00000505315 DENND4CQ5VZ89 1909 aa2.1□□□□□ -2.07
HMGB1P22-201ENST00000505315 SPEF2Q9C093 1822 aa2.1□□□□□ -2.07
HMGB1P22-201ENST00000505315 PLXNB1O43157 2135 aa2.09□□□□□ -2.07
HMGB1P22-201ENST00000505315 RGS12O14924 1447 aa2.09□□□□□ -2.07
HMGB1P22-201ENST00000505315 MYOM3Q5VTT5 1437 aa2.09□□□□□ -2.07
HMGB1P22-201ENST00000505315 RIMS1Q86UR5 1692 aaKnown RBP2.09□□□□□ -2.07
HMGB1P22-201ENST00000505315 COL1A1P02452 1464 aaPredicted RBP2.09□□□□□ -2.07
HMGB1P22-201ENST00000505315 ARHGEF28Q8N1W1 1705 aaKnown RBP2.09□□□□□ -2.07
HMGB1P22-201ENST00000505315 TRAV12-2A0A075B6T6 113 aa2.09□□□□□ -2.07
HMGB1P22-201ENST00000505315 MUC21A0A0G2JKD1 596 aa2.09□□□□□ -2.07
HMGB1P22-201ENST00000505315 MUC21A0A140T8X8 626 aa2.09□□□□□ -2.07
HMGB1P22-201ENST00000505315 TCRBV4S1A1TA0A5B7 111 aa2.09□□□□□ -2.07
HMGB1P22-201ENST00000505315 IBA57-AS1B1ANH7 110 aa2.09□□□□□ -2.07
HMGB1P22-201ENST00000505315 E7EQL1 145 aa2.09□□□□□ -2.07
HMGB1P22-201ENST00000505315 HYPMO75409 117 aa2.09□□□□□ -2.07
HMGB1P22-201ENST00000505315 ERC2-IT1O76042 136 aa2.09□□□□□ -2.07
HMGB1P22-201ENST00000505315 IGLV1-51P01701 117 aa2.09□□□□□ -2.07
HMGB1P22-201ENST00000505315 DEFB113Q30KQ7 82 aa2.09□□□□□ -2.07
HMGB1P22-201ENST00000505315 MIC13Q5XKP0 118 aa2.09□□□□□ -2.07
HMGB1P22-201ENST00000505315 MRPL54Q6P161 138 aaKnown RBP2.09□□□□□ -2.07
HMGB1P22-201ENST00000505315 Q6ZTI0 123 aa2.09□□□□□ -2.07
HMGB1P22-201ENST00000505315 ARPINQ7Z6K5 226 aa2.09□□□□□ -2.07
HMGB1P22-201ENST00000505315 CCL4L1Q8NHW4 92 aa2.09□□□□□ -2.07
HMGB1P22-201ENST00000505315 DPH3Q96FX2 82 aa2.09□□□□□ -2.07
HMGB1P22-201ENST00000505315 Q96M85 177 aa2.09□□□□□ -2.07
HMGB1P22-201ENST00000505315 SNRNP25Q9BV90 132 aaKnown RBP2.09□□□□□ -2.07
HMGB1P22-201ENST00000505315 NAA60Q9H7X0 242 aa2.09□□□□□ -2.07
HMGB1P22-201ENST00000505315 TAS2R8Q9NYW2 309 aa2.09□□□□□ -2.07
HMGB1P22-201ENST00000505315 ZFP30Q9Y2G7 519 aa2.09□□□□□ -2.07
HMGB1P22-201ENST00000505315 OBSL1O75147 1896 aa2.09□□□□□ -2.08
HMGB1P22-201ENST00000505315 CCDC88AQ3V6T2 1871 aa2.09□□□□□ -2.08
HMGB1P22-201ENST00000505315 ARHGAP31Q2M1Z3 1444 aa2.08□□□□□ -2.08
HMGB1P22-201ENST00000505315 COL2A1P02458 1487 aaPredicted RBP2.08□□□□□ -2.08
HMGB1P22-201ENST00000505315 MBD5Q9P267 1494 aa2.08□□□□□ -2.08
HMGB1P22-201ENST00000505315 FER1L6Q2WGJ9 1857 aa2.08□□□□□ -2.08
HMGB1P22-201ENST00000505315 IGLV10-54A0A075B6I4 117 aa2.08□□□□□ -2.08
HMGB1P22-201ENST00000505315 TRAV14DV4A0A0A6YYC5 116 aa2.08□□□□□ -2.08
HMGB1P22-201ENST00000505315 TRAV10A0A0B4J240 114 aa2.08□□□□□ -2.08
HMGB1P22-201ENST00000505315 IFITM5A6NNB3 132 aa2.08□□□□□ -2.08
HMGB1P22-201ENST00000505315 J3QLW9 94 aa2.08□□□□□ -2.08
HMGB1P22-201ENST00000505315 M0R143 59 aa2.08□□□□□ -2.08
HMGB1P22-201ENST00000505315 SNCGO76070 127 aa2.08□□□□□ -2.08
HMGB1P22-201ENST00000505315 DSCR4P56555 118 aaPredicted RBP2.08□□□□□ -2.08
HMGB1P22-201ENST00000505315 GNG2P59768 71 aa2.08□□□□□ -2.08
HMGB1P22-201ENST00000505315 ELOBQ15370 118 aa2.08□□□□□ -2.08
HMGB1P22-201ENST00000505315 PRR9Q5T870 116 aa2.08□□□□□ -2.08
HMGB1P22-201ENST00000505315 SVBPQ8N300 66 aa2.08□□□□□ -2.08
HMGB1P22-201ENST00000505315 PLPP5Q8NEB5 264 aa2.08□□□□□ -2.08
HMGB1P22-201ENST00000505315 ZNF431Q8TF32 576 aaPredicted RBP2.08□□□□□ -2.08
HMGB1P22-201ENST00000505315 SFT2D1Q8WV19 159 aa2.08□□□□□ -2.08
HMGB1P22-201ENST00000505315 CCL26Q9Y258 94 aa2.08□□□□□ -2.08
HMGB1P22-201ENST00000505315 MPC1Q9Y5U8 109 aa2.08□□□□□ -2.08
HMGB1P22-201ENST00000505315 LCTP09848 1927 aa2.08□□□□□ -2.08
HMGB1P22-201ENST00000505315 KTN1Q86UP2 1357 aaKnown RBP2.08□□□□□ -2.08
HMGB1P22-201ENST00000505315 SHANK3Q9BYB0 1731 aa2.08□□□□□ -2.08
HMGB1P22-201ENST00000505315 NACAE9PAV3 2078 aa2.07□□□□□ -2.08
HMGB1P22-201ENST00000505315 LRCOL1A6NCL2 159 aa2.07□□□□□ -2.08
HMGB1P22-201ENST00000505315 E7EUB6 86 aa2.07□□□□□ -2.08
HMGB1P22-201ENST00000505315 KLF7O75840 302 aaPredicted RBP2.07□□□□□ -2.08
HMGB1P22-201ENST00000505315 IL5P05113 134 aa2.07□□□□□ -2.08
HMGB1P22-201ENST00000505315 CCL4P13236 92 aa2.07□□□□□ -2.08
HMGB1P22-201ENST00000505315 MIFP14174 115 aa2.07□□□□□ -2.08
HMGB1P22-201ENST00000505315 BRS3P32247 399 aa2.07□□□□□ -2.08
HMGB1P22-201ENST00000505315 S100A10P60903 97 aa2.07□□□□□ -2.08
HMGB1P22-201ENST00000505315 PKIAP61925 76 aa2.07□□□□□ -2.08
HMGB1P22-201ENST00000505315 CATR1Q13166 79 aa2.07□□□□□ -2.08
HMGB1P22-201ENST00000505315 C9orf153Q5TBE3 101 aa2.07□□□□□ -2.08
HMGB1P22-201ENST00000505315 KRTAP1-3Q8IUG1 177 aa2.07□□□□□ -2.08
HMGB1P22-201ENST00000505315 ACBD7Q8N6N7 88 aa2.07□□□□□ -2.08
HMGB1P22-201ENST00000505315 MRPL57Q9BQC6 102 aaKnown RBP2.07□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 113.9 ms