RNA–Protein interactions for RNA: ENST00000505009.5

UBE2D3-218, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-218ENST00000505009 HSPB8Q9UJY1 196 aa0.5□□□□□ -2.33
UBE2D3-218ENST00000505009 TNFSF18Q9UNG2 199 aa0.5□□□□□ -2.33
UBE2D3-218ENST00000505009 ZFP30Q9Y2G7 519 aa0.5□□□□□ -2.33
UBE2D3-218ENST00000505009 EXPH5Q8NEV8 1989 aa0.5□□□□□ -2.33
UBE2D3-218ENST00000505009 TNRC6BQ9UPQ9 1833 aaKnown RBP0.5□□□□□ -2.33
UBE2D3-218ENST00000505009 TECPR2O15040 1411 aa0.49□□□□□ -2.33
UBE2D3-218ENST00000505009 KIAA1107Q9UPP5 1409 aa0.49□□□□□ -2.33
UBE2D3-218ENST00000505009 TRAPPC8Q9Y2L5 1435 aa0.49□□□□□ -2.33
UBE2D3-218ENST00000505009 RTL9Q8NET4 1388 aa0.49□□□□□ -2.33
UBE2D3-218ENST00000505009 IGHV1-58A0A0C4DH39 117 aa0.49□□□□□ -2.33
UBE2D3-218ENST00000505009 TRDV1A0A1B0GX56 115 aa0.49□□□□□ -2.33
UBE2D3-218ENST00000505009 GNG14A0A1W2PPG7 69 aa0.49□□□□□ -2.33
UBE2D3-218ENST00000505009 ARL5CA6NH57 179 aa0.49□□□□□ -2.33
UBE2D3-218ENST00000505009 H0YJX3 145 aa0.49□□□□□ -2.33
UBE2D3-218ENST00000505009 GABARAPH6UMI1 98 aa0.49□□□□□ -2.33
UBE2D3-218ENST00000505009 INE1O15225 51 aa0.49□□□□□ -2.33
UBE2D3-218ENST00000505009 NUPR1O60356 82 aa0.49□□□□□ -2.33
UBE2D3-218ENST00000505009 TPT1P13693 172 aaKnown RBP0.49□□□□□ -2.33
UBE2D3-218ENST00000505009 ZNF25P17030 456 aaPredicted RBP0.49□□□□□ -2.33
UBE2D3-218ENST00000505009 S100A11P31949 105 aa0.49□□□□□ -2.33
UBE2D3-218ENST00000505009 SRP9P49458 86 aaKnown RBP0.49□□□□□ -2.33
UBE2D3-218ENST00000505009 ROMO1P60602 79 aa0.49□□□□□ -2.33
UBE2D3-218ENST00000505009 MRPS36P82909 103 aaKnown RBP0.49□□□□□ -2.33
UBE2D3-218ENST00000505009 PSG9Q00887 426 aa0.49□□□□□ -2.33
UBE2D3-218ENST00000505009 VMA21Q3ZAQ7 101 aa0.49□□□□□ -2.33
UBE2D3-218ENST00000505009 TMEM78Q5T7P6 136 aa0.49□□□□□ -2.33
UBE2D3-218ENST00000505009 C1orf134Q5TEV5 83 aa0.49□□□□□ -2.33
UBE2D3-218ENST00000505009 KRTAP26-1Q6PEX3 210 aa0.49□□□□□ -2.33
UBE2D3-218ENST00000505009 HAGHLQ6PII5 290 aaPredicted RBP0.49□□□□□ -2.33
UBE2D3-218ENST00000505009 HRCT1Q6UXD1 115 aa0.49□□□□□ -2.33
UBE2D3-218ENST00000505009 TOMM20LQ6UXN7 152 aa0.49□□□□□ -2.33
UBE2D3-218ENST00000505009 ZNF833PQ6ZTB9 187 aa0.49□□□□□ -2.33
UBE2D3-218ENST00000505009 PRR15Q8IV56 129 aa0.49□□□□□ -2.33
UBE2D3-218ENST00000505009 TMEM35BQ8NCS4 154 aa0.49□□□□□ -2.33
UBE2D3-218ENST00000505009 PLPP5Q8NEB5 264 aa0.49□□□□□ -2.33
UBE2D3-218ENST00000505009 OR9Q1Q8NGQ5 310 aa0.49□□□□□ -2.33
UBE2D3-218ENST00000505009 OR10AG1Q8NH19 301 aa0.49□□□□□ -2.33
UBE2D3-218ENST00000505009 OR5AK2Q8NH90 309 aa0.49□□□□□ -2.33
UBE2D3-218ENST00000505009 RMND5BQ96G75 393 aaPredicted RBP0.49□□□□□ -2.33
UBE2D3-218ENST00000505009 PRELID3AQ96N28 172 aa0.49□□□□□ -2.33
UBE2D3-218ENST00000505009 OR4C12Q96R67 309 aa0.49□□□□□ -2.33
UBE2D3-218ENST00000505009 LXNQ9BS40 222 aa0.49□□□□□ -2.33
UBE2D3-218ENST00000505009 GGACTQ9BVM4 153 aa0.49□□□□□ -2.33
UBE2D3-218ENST00000505009 DDA1Q9BW61 102 aa0.49□□□□□ -2.33
UBE2D3-218ENST00000505009 MRPL40Q9NQ50 206 aaKnown RBP0.49□□□□□ -2.33
UBE2D3-218ENST00000505009 NIT2Q9NQR4 276 aa0.49□□□□□ -2.33
UBE2D3-218ENST00000505009 OTORQ9NRC9 128 aa0.49□□□□□ -2.33
UBE2D3-218ENST00000505009 SPANXA1Q9NS26 97 aa0.49□□□□□ -2.33
UBE2D3-218ENST00000505009 SPANXCQ9NY87 97 aa0.49□□□□□ -2.33
UBE2D3-218ENST00000505009 NAT8BQ9UHF3 227 aa0.49□□□□□ -2.33
UBE2D3-218ENST00000505009 HSPB11Q9Y547 144 aa0.49□□□□□ -2.33
UBE2D3-218ENST00000505009 PLXNA4Q9HCM2 1894 aa0.49□□□□□ -2.33
UBE2D3-218ENST00000505009 TRPM1Q7Z4N2 1603 aa0.49□□□□□ -2.33
UBE2D3-218ENST00000505009 HEATR1Q9H583 2144 aaKnown RBP0.49□□□□□ -2.33
UBE2D3-218ENST00000505009 NISCHQ9Y2I1 1504 aa0.48□□□□□ -2.33
UBE2D3-218ENST00000505009 CHD3Q12873 2000 aaKnown RBP0.48□□□□□ -2.33
UBE2D3-218ENST00000505009 ANKRD31Q8N7Z5 1873 aa0.48□□□□□ -2.33
UBE2D3-218ENST00000505009 NUP210Q8TEM1 1887 aaPredicted RBP0.48□□□□□ -2.33
UBE2D3-218ENST00000505009 PEAK1Q9H792 1746 aa0.48□□□□□ -2.33
UBE2D3-218ENST00000505009 A0A087WSZ3 146 aa0.48□□□□□ -2.33
UBE2D3-218ENST00000505009 TRAV16A0A0A6YYK6 109 aaPredicted RBP0.48□□□□□ -2.33
UBE2D3-218ENST00000505009 JMJD7-PLA2G4BH0Y9G9 81 aa0.48□□□□□ -2.33
UBE2D3-218ENST00000505009 NCR3O14931 201 aa0.48□□□□□ -2.33
UBE2D3-218ENST00000505009 CCL25O15444 150 aa0.48□□□□□ -2.33
UBE2D3-218ENST00000505009 SULT1C4O75897 302 aa0.48□□□□□ -2.33
UBE2D3-218ENST00000505009 TRACP01848 142 aa0.48□□□□□ -2.33
UBE2D3-218ENST00000505009 FABP4P15090 132 aa0.48□□□□□ -2.33
UBE2D3-218ENST00000505009 RPL7P18124 248 aaKnown RBP0.48□□□□□ -2.33
UBE2D3-218ENST00000505009 CNBPP62633 177 aaKnown RBP0.48□□□□□ -2.33
UBE2D3-218ENST00000505009 DIAPH2-AS1Q14236 149 aa0.48□□□□□ -2.33
UBE2D3-218ENST00000505009 SPRNQ5BIV9 151 aa0.48□□□□□ -2.33
UBE2D3-218ENST00000505009 TMEM128Q5BJH2 165 aa0.48□□□□□ -2.33
UBE2D3-218ENST00000505009 CASC2Q6XLA1 102 aa0.48□□□□□ -2.33
UBE2D3-218ENST00000505009 LINC00305Q7Z4B0 112 aa0.48□□□□□ -2.33
UBE2D3-218ENST00000505009 OR10AC1Q8NH08 325 aa0.48□□□□□ -2.33
UBE2D3-218ENST00000505009 Q8TAT8 98 aa0.48□□□□□ -2.33
UBE2D3-218ENST00000505009 PSMF1Q92530 271 aa0.48□□□□□ -2.33
UBE2D3-218ENST00000505009 OBSCN-AS1Q96MR7 158 aa0.48□□□□□ -2.33
UBE2D3-218ENST00000505009 AMELYQ99218 206 aa0.48□□□□□ -2.33
UBE2D3-218ENST00000505009 AIF1LQ9BQI0 150 aa0.48□□□□□ -2.33
UBE2D3-218ENST00000505009 CST11Q9H112 138 aa0.48□□□□□ -2.33
UBE2D3-218ENST00000505009 BOKQ9UMX3 212 aaPredicted RBP0.48□□□□□ -2.33
UBE2D3-218ENST00000505009 CHCHD2Q9Y6H1 151 aaPredicted RBP0.48□□□□□ -2.33
UBE2D3-218ENST00000505009 NCOA6Q14686 2063 aaPredicted RBP0.48□□□□□ -2.33
UBE2D3-218ENST00000505009 TNRC6AQ8NDV7 1962 aaKnown RBP0.48□□□□□ -2.33
UBE2D3-218ENST00000505009 MGAMO43451 1857 aa0.48□□□□□ -2.33
UBE2D3-218ENST00000505009 UNC79Q9P2D8 2635 aa0.48□□□□□ -2.33
UBE2D3-218ENST00000505009 SIP14410 1827 aa0.48□□□□□ -2.33
UBE2D3-218ENST00000505009 PCLOQ9Y6V0 5065 aa0.47□□□□□ -2.33
UBE2D3-218ENST00000505009 COL24A1Q17RW2 1714 aa0.47□□□□□ -2.33
UBE2D3-218ENST00000505009 MCM3APO60318 1980 aa0.47□□□□□ -2.33
UBE2D3-218ENST00000505009 KIAA1549Q9HCM3 1950 aa0.47□□□□□ -2.33
UBE2D3-218ENST00000505009 PHRF1Q9P1Y6 1649 aaKnown RBP0.47□□□□□ -2.33
UBE2D3-218ENST00000505009 PTPRFP10586 1907 aa0.47□□□□□ -2.33
UBE2D3-218ENST00000505009 ALPK3Q96L96 1907 aa0.47□□□□□ -2.33
UBE2D3-218ENST00000505009 TRAV23DV6A0A075B6W5 121 aa0.47□□□□□ -2.33
UBE2D3-218ENST00000505009 TRAV13-1A0A0B4J241 112 aa0.47□□□□□ -2.33
UBE2D3-218ENST00000505009 LOC105371267A0A1B0GV96 52 aa0.47□□□□□ -2.33
UBE2D3-218ENST00000505009 LOC107986453A0A1B0GWG9 222 aa0.47□□□□□ -2.33
UBE2D3-218ENST00000505009 A0A1W2PRE2 83 aa0.47□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 97.5 ms