RNA–Protein interactions for RNA: ENST00000503360.1

HMGB1P35-201, Transcript of high mobility group box 1 pseudogene 35, humanhuman

BASIC

Gene HMGB1P35, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P35-201ENST00000503360 IGF2P01344 180 aa1.16□□□□□ -2.22
HMGB1P35-201ENST00000503360 TRACP01848 142 aa1.16□□□□□ -2.22
HMGB1P35-201ENST00000503360 ZNF25P17030 456 aaPredicted RBP1.16□□□□□ -2.22
HMGB1P35-201ENST00000503360 PEBP1P30086 187 aaKnown RBP1.16□□□□□ -2.22
HMGB1P35-201ENST00000503360 ZNF93P35789 620 aaPredicted RBP1.16□□□□□ -2.22
HMGB1P35-201ENST00000503360 ROMO1P60602 79 aa1.16□□□□□ -2.22
HMGB1P35-201ENST00000503360 RPL26P61254 145 aaKnown RBP1.16□□□□□ -2.22
HMGB1P35-201ENST00000503360 BLCAPP62952 87 aa1.16□□□□□ -2.22
HMGB1P35-201ENST00000503360 CIRBPQ14011 172 aaKnown RBP1.16□□□□□ -2.22
HMGB1P35-201ENST00000503360 DIAPH2-AS1Q14236 149 aa1.16□□□□□ -2.22
HMGB1P35-201ENST00000503360 ASB16-AS1Q495Z4 193 aa1.16□□□□□ -2.22
HMGB1P35-201ENST00000503360 RNASE10Q5GAN6 216 aaKnown RBP1.16□□□□□ -2.22
HMGB1P35-201ENST00000503360 GLIPR1L1Q6UWM5 242 aa1.16□□□□□ -2.22
HMGB1P35-201ENST00000503360 RPS19BP1Q86WX3 136 aaKnown RBP1.16□□□□□ -2.22
HMGB1P35-201ENST00000503360 Q8IYB0 196 aa1.16□□□□□ -2.22
HMGB1P35-201ENST00000503360 ATOH7Q8N100 152 aa1.16□□□□□ -2.22
HMGB1P35-201ENST00000503360 TCTEX1D1Q8N7M0 179 aa1.16□□□□□ -2.22
HMGB1P35-201ENST00000503360 LINC00301Q8NCQ3 95 aa1.16□□□□□ -2.22
HMGB1P35-201ENST00000503360 CCL4L1Q8NHW4 92 aa1.16□□□□□ -2.22
HMGB1P35-201ENST00000503360 OR4C12Q96R67 309 aa1.16□□□□□ -2.22
HMGB1P35-201ENST00000503360 SLC50A1Q9BRV3 221 aa1.16□□□□□ -2.22
HMGB1P35-201ENST00000503360 PDCD10Q9BUL8 212 aa1.16□□□□□ -2.22
HMGB1P35-201ENST00000503360 RERGLQ9H628 205 aa1.16□□□□□ -2.22
HMGB1P35-201ENST00000503360 NIT2Q9NQR4 276 aa1.16□□□□□ -2.22
HMGB1P35-201ENST00000503360 SAR1AQ9NR31 198 aa1.16□□□□□ -2.22
HMGB1P35-201ENST00000503360 PRO2289Q9P1D8 64 aa1.16□□□□□ -2.22
HMGB1P35-201ENST00000503360 COMMD3Q9UBI1 195 aa1.16□□□□□ -2.22
HMGB1P35-201ENST00000503360 RPL26L1Q9UNX3 145 aaKnown RBP1.16□□□□□ -2.22
HMGB1P35-201ENST00000503360 SOX21Q9Y651 276 aaPredicted RBP1.16□□□□□ -2.22
HMGB1P35-201ENST00000503360 LHFPL6Q9Y693 200 aa1.16□□□□□ -2.22
HMGB1P35-201ENST00000503360 TRPM6Q9BX84 2022 aa1.16□□□□□ -2.22
HMGB1P35-201ENST00000503360 KDM5CP41229 1560 aa1.16□□□□□ -2.22
HMGB1P35-201ENST00000503360 NAIPQ13075 1403 aa1.15□□□□□ -2.22
HMGB1P35-201ENST00000503360 FAM135BQ49AJ0 1406 aa1.15□□□□□ -2.22
HMGB1P35-201ENST00000503360 TNS3Q68CZ2 1445 aa1.15□□□□□ -2.22
HMGB1P35-201ENST00000503360 DLC1Q96QB1 1528 aa1.15□□□□□ -2.22
HMGB1P35-201ENST00000503360 KDM5BQ9UGL1 1544 aa1.15□□□□□ -2.22
HMGB1P35-201ENST00000503360 NISCHQ9Y2I1 1504 aa1.15□□□□□ -2.22
HMGB1P35-201ENST00000503360 NALCNQ8IZF0 1738 aa1.15□□□□□ -2.22
HMGB1P35-201ENST00000503360 FOCADQ5VW36 1801 aa1.15□□□□□ -2.22
HMGB1P35-201ENST00000503360 SLX4Q8IY92 1834 aa1.15□□□□□ -2.22
HMGB1P35-201ENST00000503360 SPEF2Q9C093 1822 aa1.15□□□□□ -2.22
HMGB1P35-201ENST00000503360 PLXNB1O43157 2135 aa1.15□□□□□ -2.23
HMGB1P35-201ENST00000503360 IGKV1D-42A0A075B6H8 117 aa1.15□□□□□ -2.23
HMGB1P35-201ENST00000503360 TRBV20-1A0A075B6N2 111 aa1.15□□□□□ -2.23
HMGB1P35-201ENST00000503360 TRAV3A0A0B4J244 114 aa1.15□□□□□ -2.23
HMGB1P35-201ENST00000503360 TRAV1-1A0A0B4J248 108 aa1.15□□□□□ -2.23
HMGB1P35-201ENST00000503360 FAM236AA0A1B0GUQ0 79 aa1.15□□□□□ -2.23
HMGB1P35-201ENST00000503360 FAM236BA0A1B0GV22 79 aa1.15□□□□□ -2.23
HMGB1P35-201ENST00000503360 hDV103S1A0JD37 113 aa1.15□□□□□ -2.23
HMGB1P35-201ENST00000503360 BBIP1A8MTZ0 92 aa1.15□□□□□ -2.23
HMGB1P35-201ENST00000503360 E7EUB6 86 aa1.15□□□□□ -2.23
HMGB1P35-201ENST00000503360 F6UZH7 168 aa1.15□□□□□ -2.23
HMGB1P35-201ENST00000503360 RBP4P02753 201 aa1.15□□□□□ -2.23
HMGB1P35-201ENST00000503360 APODP05090 189 aa1.15□□□□□ -2.23
HMGB1P35-201ENST00000503360 SLC25A4P12235 298 aa1.15□□□□□ -2.23
HMGB1P35-201ENST00000503360 CCL4P13236 92 aa1.15□□□□□ -2.23
HMGB1P35-201ENST00000503360 FGF7P21781 194 aa1.15□□□□□ -2.23
HMGB1P35-201ENST00000503360 ETV6P41212 452 aa1.15□□□□□ -2.23
HMGB1P35-201ENST00000503360 DSCR4P56555 118 aaPredicted RBP1.15□□□□□ -2.23
HMGB1P35-201ENST00000503360 CDK6Q00534 326 aa1.15□□□□□ -2.23
HMGB1P35-201ENST00000503360 PLGLB1Q02325 96 aa1.15□□□□□ -2.23
HMGB1P35-201ENST00000503360 OCIAD2Q56VL3 154 aa1.15□□□□□ -2.23
HMGB1P35-201ENST00000503360 SCIMPQ6UWF3 145 aa1.15□□□□□ -2.23
HMGB1P35-201ENST00000503360 IZUMO2Q6UXV1 221 aa1.15□□□□□ -2.23
HMGB1P35-201ENST00000503360 C10orf111Q8N326 155 aa1.15□□□□□ -2.23
HMGB1P35-201ENST00000503360 OR5AK2Q8NH90 309 aa1.15□□□□□ -2.23
HMGB1P35-201ENST00000503360 TMEM254Q8TBM7 123 aa1.15□□□□□ -2.23
HMGB1P35-201ENST00000503360 POP5Q969H6 163 aaKnown RBP1.15□□□□□ -2.23
HMGB1P35-201ENST00000503360 C20orf166-AS1Q96NR2 134 aa1.15□□□□□ -2.23
HMGB1P35-201ENST00000503360 METTL1Q9UBP6 276 aaKnown RBP1.15□□□□□ -2.23
HMGB1P35-201ENST00000503360 DNAJC15Q9Y5T4 150 aa1.15□□□□□ -2.23
HMGB1P35-201ENST00000503360 TMEM2Q9UHN6 1383 aa1.15□□□□□ -2.23
HMGB1P35-201ENST00000503360 TCOF1Q13428 1488 aaKnown RBP1.15□□□□□ -2.23
HMGB1P35-201ENST00000503360 FRMPD1Q5SYB0 1578 aa1.15□□□□□ -2.23
HMGB1P35-201ENST00000503360 FER1L6Q2WGJ9 1857 aa1.15□□□□□ -2.23
HMGB1P35-201ENST00000503360 GREB1Q4ZG55 1949 aa1.15□□□□□ -2.23
HMGB1P35-201ENST00000503360 NUP98P52948 1817 aa1.15□□□□□ -2.23
HMGB1P35-201ENST00000503360 EML6Q6ZMW3 1958 aa1.14□□□□□ -2.23
HMGB1P35-201ENST00000503360 STRCQ7RTU9 1775 aa1.14□□□□□ -2.23
HMGB1P35-201ENST00000503360 GRIN2AQ12879 1464 aa1.14□□□□□ -2.23
HMGB1P35-201ENST00000503360 A0A087WSZ3 146 aa1.14□□□□□ -2.23
HMGB1P35-201ENST00000503360 IGKV2D-26A0A0A0MRZ7 120 aa1.14□□□□□ -2.23
HMGB1P35-201ENST00000503360 TRAV12-1A0A0B4J245 112 aa1.14□□□□□ -2.23
HMGB1P35-201ENST00000503360 A0A0G2JMM0 328 aa1.14□□□□□ -2.23
HMGB1P35-201ENST00000503360 A0A1W2PPB8 328 aa1.14□□□□□ -2.23
HMGB1P35-201ENST00000503360 TCRBV4S1A1TA0A5B7 111 aa1.14□□□□□ -2.23
HMGB1P35-201ENST00000503360 ZNF705FA8MVS1 300 aaPredicted RBP1.14□□□□□ -2.23
HMGB1P35-201ENST00000503360 KIR3DP1A8MWS1 328 aa1.14□□□□□ -2.23
HMGB1P35-201ENST00000503360 E7EQL1 145 aa1.14□□□□□ -2.23
HMGB1P35-201ENST00000503360 CORTO00230 105 aa1.14□□□□□ -2.23
HMGB1P35-201ENST00000503360 ZNF737O75373 536 aa1.14□□□□□ -2.23
HMGB1P35-201ENST00000503360 IGLV1-51P01701 117 aa1.14□□□□□ -2.23
HMGB1P35-201ENST00000503360 CRPP02741 224 aa1.14□□□□□ -2.23
HMGB1P35-201ENST00000503360 ASAH2BP0C7U1 165 aa1.14□□□□□ -2.23
HMGB1P35-201ENST00000503360 AKAIN1P0CW23 69 aa1.14□□□□□ -2.23
HMGB1P35-201ENST00000503360 PYYP10082 97 aa1.14□□□□□ -2.23
HMGB1P35-201ENST00000503360 CKS2P33552 79 aa1.14□□□□□ -2.23
HMGB1P35-201ENST00000503360 SSR2P43308 183 aa1.14□□□□□ -2.23
HMGB1P35-201ENST00000503360 PCBD1P61457 104 aa1.14□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms