RNA–Protein interactions for RNA: ENST00000498808.5

HDAC6-236, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-236ENST00000498808 SRPXP78539 464 aa10.44□□□□□ -0.74
HDAC6-236ENST00000498808 FHL2Q14192 279 aa10.44□□□□□ -0.74
HDAC6-236ENST00000498808 SPANXN5Q5MJ07 72 aa10.44□□□□□ -0.74
HDAC6-236ENST00000498808 Q6ZSA8 131 aa10.44□□□□□ -0.74
HDAC6-236ENST00000498808 C8orf49Q96NF6 230 aa10.44□□□□□ -0.74
HDAC6-236ENST00000498808 ODF3Q96PU9 254 aa10.44□□□□□ -0.74
HDAC6-236ENST00000498808 FUNDC2Q9BWH2 189 aa10.44□□□□□ -0.74
HDAC6-236ENST00000498808 SMCO3A2RU48 225 aa10.43□□□□□ -0.74
HDAC6-236ENST00000498808 H3BTX0 84 aa10.43□□□□□ -0.74
HDAC6-236ENST00000498808 PSCAO43653 123 aa10.43□□□□□ -0.74
HDAC6-236ENST00000498808 SYNGR2O43760 224 aa10.43□□□□□ -0.74
HDAC6-236ENST00000498808 MED6O75586 246 aa10.43□□□□□ -0.74
HDAC6-236ENST00000498808 TCL1AP56279 114 aa10.43□□□□□ -0.74
HDAC6-236ENST00000498808 KRTAP10-4P60372 401 aaPredicted RBP10.43□□□□□ -0.74
HDAC6-236ENST00000498808 CLVS1Q8IUQ0 354 aaPredicted RBP10.43□□□□□ -0.74
HDAC6-236ENST00000498808 SMIM4Q8WVI0 70 aa10.43□□□□□ -0.74
HDAC6-236ENST00000498808 ARL6Q9H0F7 186 aa10.43□□□□□ -0.74
HDAC6-236ENST00000498808 ARV1Q9H2C2 271 aa10.43□□□□□ -0.74
HDAC6-236ENST00000498808 MIXL1Q9H2W2 232 aa10.43□□□□□ -0.74
HDAC6-236ENST00000498808 HHLA3Q9XRX5 114 aa10.43□□□□□ -0.74
HDAC6-236ENST00000498808 DUXBA0A1W2PPF3 345 aa10.42□□□□□ -0.74
HDAC6-236ENST00000498808 OXTP01178 125 aa10.42□□□□□ -0.74
HDAC6-236ENST00000498808 SLC25A6P12236 298 aa10.42□□□□□ -0.74
HDAC6-236ENST00000498808 ANXA3P12429 323 aa10.42□□□□□ -0.74
HDAC6-236ENST00000498808 SELENOTP62341 195 aa10.42□□□□□ -0.74
HDAC6-236ENST00000498808 MRPS10P82664 201 aaKnown RBP10.42□□□□□ -0.74
HDAC6-236ENST00000498808 SLAQ13239 276 aa10.42□□□□□ -0.74
HDAC6-236ENST00000498808 ANXA2RQ3ZCQ2 193 aa10.42□□□□□ -0.74
HDAC6-236ENST00000498808 C10orf126Q8N4M7 172 aa10.42□□□□□ -0.74
HDAC6-236ENST00000498808 AP3S1Q92572 193 aa10.42□□□□□ -0.74
HDAC6-236ENST00000498808 VGLL1Q99990 258 aa10.42□□□□□ -0.74
HDAC6-236ENST00000498808 MRPL16Q9NX20 251 aaKnown RBP10.42□□□□□ -0.74
HDAC6-236ENST00000498808 C7orf71A4D174 169 aa10.41□□□□□ -0.74
HDAC6-236ENST00000498808 K7EQD1 137 aa10.41□□□□□ -0.74
HDAC6-236ENST00000498808 EIF4E3Q8N5X7 224 aaKnown RBP10.41□□□□□ -0.74
HDAC6-236ENST00000498808 SCGB3A2Q96PL1 93 aa10.41□□□□□ -0.74
HDAC6-236ENST00000498808 E5RGE8 158 aa10.4□□□□□ -0.74
HDAC6-236ENST00000498808 SLC25A5P05141 298 aaKnown RBP10.4□□□□□ -0.74
HDAC6-236ENST00000498808 SRIP30626 198 aa10.4□□□□□ -0.74
HDAC6-236ENST00000498808 S100A7AQ86SG5 101 aa10.4□□□□□ -0.74
HDAC6-236ENST00000498808 SAT2Q96F10 170 aaPredicted RBP10.4□□□□□ -0.74
HDAC6-236ENST00000498808 MRPL32Q9BYC8 188 aaKnown RBP10.4□□□□□ -0.74
HDAC6-236ENST00000498808 VCX3AQ9NNX9 186 aa10.4□□□□□ -0.74
HDAC6-236ENST00000498808 SCP2D1Q9UJQ7 156 aa10.4□□□□□ -0.74
HDAC6-236ENST00000498808 STRAPQ9Y3F4 350 aaKnown RBP10.4□□□□□ -0.74
HDAC6-236ENST00000498808 KLLNB2CW77 178 aa10.39□□□□□ -0.75
HDAC6-236ENST00000498808 H3BQ15 152 aa10.39□□□□□ -0.75
HDAC6-236ENST00000498808 IGLC2P0DOY2 106 aa10.39□□□□□ -0.75
HDAC6-236ENST00000498808 CD300CQ08708 224 aa10.39□□□□□ -0.75
HDAC6-236ENST00000498808 BTN1A1Q13410 526 aa10.39□□□□□ -0.75
HDAC6-236ENST00000498808 IBA57Q5T440 356 aaKnown RBP10.39□□□□□ -0.75
HDAC6-236ENST00000498808 MORN5Q5VZ52 161 aa10.39□□□□□ -0.75
HDAC6-236ENST00000498808 LINC00305Q7Z4B0 112 aa10.39□□□□□ -0.75
HDAC6-236ENST00000498808 BPIFA4PQ86YQ2 179 aa10.39□□□□□ -0.75
HDAC6-236ENST00000498808 TP53TG3Q9ULZ0 132 aa10.39□□□□□ -0.75
HDAC6-236ENST00000498808 RNF24Q9Y225 148 aa10.39□□□□□ -0.75
HDAC6-236ENST00000498808 PXMP4Q9Y6I8 212 aa10.39□□□□□ -0.75
HDAC6-236ENST00000498808 A0A087WXM4 84 aa10.38□□□□□ -0.75
HDAC6-236ENST00000498808 ANKRD20A5PA0PJZ0 165 aa10.38□□□□□ -0.75
HDAC6-236ENST00000498808 K7EPK0 472 aa10.38□□□□□ -0.75
HDAC6-236ENST00000498808 CCNKO75909 580 aa10.38□□□□□ -0.75
HDAC6-236ENST00000498808 SLC38A11Q08AI6 406 aa10.38□□□□□ -0.75
HDAC6-236ENST00000498808 C4orf46Q504U0 113 aa10.38□□□□□ -0.75
HDAC6-236ENST00000498808 LRTM2Q8N967 370 aa10.38□□□□□ -0.75
HDAC6-236ENST00000498808 RCL1Q9Y2P8 373 aaKnown RBP10.38□□□□□ -0.75
HDAC6-236ENST00000498808 PIGBOS1A0A0B4J2F0 54 aa10.37□□□□□ -0.75
HDAC6-236ENST00000498808 ATP6V1G2O95670 118 aa10.37□□□□□ -0.75
HDAC6-236ENST00000498808 GYPEP15421 78 aa10.37□□□□□ -0.75
HDAC6-236ENST00000498808 RRAS2P62070 204 aaPredicted RBP10.37□□□□□ -0.75
HDAC6-236ENST00000498808 ZNF415Q09FC8 603 aa10.37□□□□□ -0.75
HDAC6-236ENST00000498808 ERCC8Q13216 396 aa10.37□□□□□ -0.75
HDAC6-236ENST00000498808 WFDC2Q14508 124 aa10.37□□□□□ -0.75
HDAC6-236ENST00000498808 FAM19A4Q96LR4 140 aa10.37□□□□□ -0.75
HDAC6-236ENST00000498808 NAA50Q9GZZ1 169 aaKnown RBP10.37□□□□□ -0.75
HDAC6-236ENST00000498808 MCUBQ9NWR8 336 aa10.37□□□□□ -0.75
HDAC6-236ENST00000498808 RABL2BQ9UNT1 228 aa10.37□□□□□ -0.75
HDAC6-236ENST00000498808 TRGV4A0A0C4DH28 118 aa10.36□□□□□ -0.75
HDAC6-236ENST00000498808 IBA57-AS1B1ANH7 110 aa10.36□□□□□ -0.75
HDAC6-236ENST00000498808 CTDSPLO15194 276 aa10.36□□□□□ -0.75
HDAC6-236ENST00000498808 SFTA3P0C7M3 94 aa10.36□□□□□ -0.75
HDAC6-236ENST00000498808 OPCMLQ14982 345 aa10.36□□□□□ -0.75
HDAC6-236ENST00000498808 SCXQ7RTU7 201 aa10.36□□□□□ -0.75
HDAC6-236ENST00000498808 Q9HAA7 133 aa10.36□□□□□ -0.75
HDAC6-236ENST00000498808 PKHD1L1Q86WI1 4243 aa10.36□□□□□ -0.75
HDAC6-236ENST00000498808 IGHV3-38A0A0C4DH36 116 aa10.35□□□□□ -0.75
HDAC6-236ENST00000498808 CTDSP2O14595 271 aa10.35□□□□□ -0.75
HDAC6-236ENST00000498808 RGS5O15539 181 aa10.35□□□□□ -0.75
HDAC6-236ENST00000498808 MPDU1O75352 247 aa10.35□□□□□ -0.75
HDAC6-236ENST00000498808 OR4E1P0C645 316 aa10.35□□□□□ -0.75
HDAC6-236ENST00000498808 RNASE4P34096 147 aaKnown RBP10.35□□□□□ -0.75
HDAC6-236ENST00000498808 CTF1Q16619 201 aa10.35□□□□□ -0.75
HDAC6-236ENST00000498808 TMEM128Q5BJH2 165 aa10.35□□□□□ -0.75
HDAC6-236ENST00000498808 PXDC1Q5TGL8 231 aa10.35□□□□□ -0.75
HDAC6-236ENST00000498808 Q6ZQT7 251 aa10.35□□□□□ -0.75
HDAC6-236ENST00000498808 PCNPQ8WW12 178 aaKnown RBP10.35□□□□□ -0.75
HDAC6-236ENST00000498808 TMEM37Q8WXS4 190 aa10.35□□□□□ -0.75
HDAC6-236ENST00000498808 ZNF479Q96JC4 524 aa10.35□□□□□ -0.75
HDAC6-236ENST00000498808 NPVFQ9HCQ7 196 aa10.35□□□□□ -0.75
HDAC6-236ENST00000498808 TRAV5A0A0B4J249 113 aa10.34□□□□□ -0.75
HDAC6-236ENST00000498808 M0R3E3 92 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms