RNA–Protein interactions for RNA: ENST00000497815.5

CUX1-210, Transcript of cut like homeobox 1, humanhuman

TSL 2

Gene CUX1, Length 947 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-210ENST00000497815 ZNF705EA8MWA4 302 aaPredicted RBP8.79□□□□□ -1
CUX1-210ENST00000497815 PRAC2D3DTV9 90 aa8.79□□□□□ -1
CUX1-210ENST00000497815 M0R3E3 92 aa8.79□□□□□ -1
CUX1-210ENST00000497815 UBE2G2P60604 165 aa8.79□□□□□ -1
CUX1-210ENST00000497815 EBLN2Q6P2I7 272 aa8.79□□□□□ -1
CUX1-210ENST00000497815 FOXI2Q6ZQN5 318 aa8.79□□□□□ -1
CUX1-210ENST00000497815 OR4B1Q8NGF8 309 aa8.79□□□□□ -1
CUX1-210ENST00000497815 MBD3L1Q8WWY6 194 aa8.79□□□□□ -1
CUX1-210ENST00000497815 Q9H3A6 140 aa8.79□□□□□ -1
CUX1-210ENST00000497815 SAV1Q9H4B6 383 aaPredicted RBP8.79□□□□□ -1
CUX1-210ENST00000497815 TMEM167BQ9NRX6 74 aa8.79□□□□□ -1
CUX1-210ENST00000497815 MEGF8Q7Z7M0 2845 aa8.79□□□□□ -1
CUX1-210ENST00000497815 LOC102724200A0A096LPH7 203 aaPredicted RBP8.78□□□□□ -1
CUX1-210ENST00000497815 A0A0J9YX75 114 aa8.78□□□□□ -1
CUX1-210ENST00000497815 HIST1H1AQ02539 215 aaPredicted RBP8.78□□□□□ -1
CUX1-210ENST00000497815 ASCL2Q99929 193 aa8.78□□□□□ -1
CUX1-210ENST00000497815 RPH3ALQ9UNE2 315 aa8.78□□□□□ -1
CUX1-210ENST00000497815 SORL1Q92673 2214 aa8.77□□□□□ -1.01
CUX1-210ENST00000497815 PGPA6NDG6 321 aa8.77□□□□□ -1.01
CUX1-210ENST00000497815 A8MZ25 164 aa8.77□□□□□ -1.01
CUX1-210ENST00000497815 H3BMM0 161 aa8.77□□□□□ -1.01
CUX1-210ENST00000497815 HLA-DRB4P13762 266 aa8.77□□□□□ -1.01
CUX1-210ENST00000497815 TRPT1Q86TN4 253 aaKnown RBP8.77□□□□□ -1.01
CUX1-210ENST00000497815 LYPD1Q8N2G4 141 aa8.77□□□□□ -1.01
CUX1-210ENST00000497815 OR8A1Q8NGG7 326 aa8.77□□□□□ -1.01
CUX1-210ENST00000497815 OTORQ9NRC9 128 aa8.77□□□□□ -1.01
CUX1-210ENST00000497815 CLEC5AQ9NY25 188 aa8.77□□□□□ -1.01
CUX1-210ENST00000497815 PRELID1Q9Y255 219 aa8.77□□□□□ -1.01
CUX1-210ENST00000497815 HLA-DRB4X5D2U9 266 aa8.77□□□□□ -1.01
CUX1-210ENST00000497815 IGKV2-40A0A087WW87 121 aaPredicted RBP8.76□□□□□ -1.01
CUX1-210ENST00000497815 IGKV2D-40P01614 121 aaPredicted RBP8.76□□□□□ -1.01
CUX1-210ENST00000497815 CSN1S1P47710 185 aa8.76□□□□□ -1.01
CUX1-210ENST00000497815 CNN1P51911 297 aaKnown RBP8.76□□□□□ -1.01
CUX1-210ENST00000497815 APOC4P55056 127 aa8.76□□□□□ -1.01
CUX1-210ENST00000497815 FXYD7P58549 80 aa8.76□□□□□ -1.01
CUX1-210ENST00000497815 CCL20P78556 96 aa8.76□□□□□ -1.01
CUX1-210ENST00000497815 TEX261Q6UWH6 196 aa8.76□□□□□ -1.01
CUX1-210ENST00000497815 LINC00322Q6ZN03 302 aaPredicted RBP8.76□□□□□ -1.01
CUX1-210ENST00000497815 OR10J6PQ8NGY7 276 aa8.76□□□□□ -1.01
CUX1-210ENST00000497815 CMTM2Q8TAZ6 248 aa8.76□□□□□ -1.01
CUX1-210ENST00000497815 SUN5Q8TC36 379 aa8.76□□□□□ -1.01
CUX1-210ENST00000497815 MRPL53Q96EL3 112 aaKnown RBP8.76□□□□□ -1.01
CUX1-210ENST00000497815 YTHDF2Q9Y5A9 579 aaKnown RBP8.76□□□□□ -1.01
CUX1-210ENST00000497815 GGTLC3B5MD39 225 aa8.75□□□□□ -1.01
CUX1-210ENST00000497815 TEX46H3BTG2 121 aa8.75□□□□□ -1.01
CUX1-210ENST00000497815 DUSP14O95147 198 aaKnown RBP8.75□□□□□ -1.01
CUX1-210ENST00000497815 CA1P00915 261 aaPredicted RBP8.75□□□□□ -1.01
CUX1-210ENST00000497815 HBE1P02100 147 aa8.75□□□□□ -1.01
CUX1-210ENST00000497815 SLC25A5P05141 298 aaKnown RBP8.75□□□□□ -1.01
CUX1-210ENST00000497815 SUMO1P63165 101 aaKnown RBP8.75□□□□□ -1.01
CUX1-210ENST00000497815 GNG5P63218 68 aa8.75□□□□□ -1.01
CUX1-210ENST00000497815 ERCC8Q13216 396 aa8.75□□□□□ -1.01
CUX1-210ENST00000497815 HAGHQ16775 308 aa8.75□□□□□ -1.01
CUX1-210ENST00000497815 CST9LP1Q5W188 147 aa8.75□□□□□ -1.01
CUX1-210ENST00000497815 SBSPONQ8IVN8 264 aa8.75□□□□□ -1.01
CUX1-210ENST00000497815 PPP1R14DQ9NXH3 145 aa8.75□□□□□ -1.01
CUX1-210ENST00000497815 DNAH3Q8TD57 4116 aa8.74□□□□□ -1.01
CUX1-210ENST00000497815 A0A1W2PRE2 83 aa8.74□□□□□ -1.01
CUX1-210ENST00000497815 FAM74A7A6NL05 159 aa8.74□□□□□ -1.01
CUX1-210ENST00000497815 PAGE4O60829 102 aa8.74□□□□□ -1.01
CUX1-210ENST00000497815 IFNA7P01567 189 aa8.74□□□□□ -1.01
CUX1-210ENST00000497815 ZNF680Q8NEM1 530 aa8.74□□□□□ -1.01
CUX1-210ENST00000497815 RXFP4Q8TDU9 374 aa8.74□□□□□ -1.01
CUX1-210ENST00000497815 PCNPQ8WW12 178 aaKnown RBP8.74□□□□□ -1.01
CUX1-210ENST00000497815 B9D2Q9BPU9 175 aa8.74□□□□□ -1.01
CUX1-210ENST00000497815 CSTL1Q9H114 145 aa8.74□□□□□ -1.01
CUX1-210ENST00000497815 SLC35B3Q9H1N7 401 aa8.74□□□□□ -1.01
CUX1-210ENST00000497815 GNG13Q9P2W3 67 aa8.74□□□□□ -1.01
CUX1-210ENST00000497815 TRAV1-1A0A0B4J248 108 aa8.73□□□□□ -1.01
CUX1-210ENST00000497815 DIRC3C9JPN6 131 aa8.73□□□□□ -1.01
CUX1-210ENST00000497815 NPIPB6E9PJ23 425 aa8.73□□□□□ -1.01
CUX1-210ENST00000497815 ATP5G3P48201 142 aa8.73□□□□□ -1.01
CUX1-210ENST00000497815 NUTF2P61970 127 aaKnown RBP8.73□□□□□ -1.01
CUX1-210ENST00000497815 BLOC1S1P78537 153 aa8.73□□□□□ -1.01
CUX1-210ENST00000497815 MORN3Q6PF18 240 aaPredicted RBP8.73□□□□□ -1.01
CUX1-210ENST00000497815 GOLT1AQ6ZVE7 132 aa8.73□□□□□ -1.01
CUX1-210ENST00000497815 VGLL1Q99990 258 aa8.73□□□□□ -1.01
CUX1-210ENST00000497815 RETNQ9HD89 108 aa8.73□□□□□ -1.01
CUX1-210ENST00000497815 KIR2DL5BA0A0G2JN68 375 aa8.72□□□□□ -1.01
CUX1-210ENST00000497815 KIR2DL5BA0A0G2JPC4 375 aa8.72□□□□□ -1.01
CUX1-210ENST00000497815 PPT1P50897 306 aa8.72□□□□□ -1.01
CUX1-210ENST00000497815 SPINK13Q1W4C9 94 aa8.72□□□□□ -1.01
CUX1-210ENST00000497815 DEFB135Q30KP9 77 aa8.72□□□□□ -1.01
CUX1-210ENST00000497815 AMTNQ6UX39 209 aa8.72□□□□□ -1.01
CUX1-210ENST00000497815 KIR2DL5AQ8N109 375 aa8.72□□□□□ -1.01
CUX1-210ENST00000497815 C5orf17Q8NAS9 161 aa8.72□□□□□ -1.01
CUX1-210ENST00000497815 KIR2DL5BQ8NHK3 375 aa8.72□□□□□ -1.01
CUX1-210ENST00000497815 AGPAT4-IT1Q9H0P7 198 aa8.72□□□□□ -1.01
CUX1-210ENST00000497815 XCL2Q9UBD3 114 aa8.72□□□□□ -1.01
CUX1-210ENST00000497815 EPDR1Q9UM22 224 aa8.72□□□□□ -1.01
CUX1-210ENST00000497815 J3KRW8 73 aa8.71□□□□□ -1.02
CUX1-210ENST00000497815 M0R2Z0 102 aa8.71□□□□□ -1.02
CUX1-210ENST00000497815 TCRAP04437 139 aa8.71□□□□□ -1.02
CUX1-210ENST00000497815 GIG44P09565 113 aaPredicted RBP8.71□□□□□ -1.02
CUX1-210ENST00000497815 CT45A10P0DMU9 189 aa8.71□□□□□ -1.02
CUX1-210ENST00000497815 TMEM78Q5T7P6 136 aa8.71□□□□□ -1.02
CUX1-210ENST00000497815 Q8TAT8 98 aa8.71□□□□□ -1.02
CUX1-210ENST00000497815 SGK494Q96LW2 274 aa8.71□□□□□ -1.02
CUX1-210ENST00000497815 CLUHP3Q96NS8 147 aa8.71□□□□□ -1.02
CUX1-210ENST00000497815 MANBALQ9NQG1 85 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 117.5 ms