RNA–Protein interactions for RNA: ENST00000496468.1

TSSC4-210, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TSSC4, Length 912 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-210ENST00000496468 TRAV1-1A0A0B4J248 108 aa13.57□□□□□ -0.24
TSSC4-210ENST00000496468 A8MZ25 164 aa13.57□□□□□ -0.24
TSSC4-210ENST00000496468 F6UB75 175 aa13.57□□□□□ -0.24
TSSC4-210ENST00000496468 M0R3E3 92 aa13.57□□□□□ -0.24
TSSC4-210ENST00000496468 HLA-DRB4P13762 266 aa13.57□□□□□ -0.24
TSSC4-210ENST00000496468 UBE2G2P60604 165 aa13.57□□□□□ -0.24
TSSC4-210ENST00000496468 ZNF680Q8NEM1 530 aa13.57□□□□□ -0.24
TSSC4-210ENST00000496468 HLA-DRB4X5D2U9 266 aa13.57□□□□□ -0.24
TSSC4-210ENST00000496468 A0A0J9YX75 114 aa13.56□□□□□ -0.24
TSSC4-210ENST00000496468 A0A1W2PRE2 83 aa13.56□□□□□ -0.24
TSSC4-210ENST00000496468 ZNF705FA8MVS1 300 aaPredicted RBP13.56□□□□□ -0.24
TSSC4-210ENST00000496468 CSN1S1P47710 185 aa13.56□□□□□ -0.24
TSSC4-210ENST00000496468 PPT1P50897 306 aa13.56□□□□□ -0.24
TSSC4-210ENST00000496468 BLOC1S1P78537 153 aa13.56□□□□□ -0.24
TSSC4-210ENST00000496468 GDF5OSQ5U4N7 250 aa13.56□□□□□ -0.24
TSSC4-210ENST00000496468 CMTM2Q8TAZ6 248 aa13.56□□□□□ -0.24
TSSC4-210ENST00000496468 ARL2-SNX15V9GYD0 113 aa13.56□□□□□ -0.24
TSSC4-210ENST00000496468 GGTLC3B5MD39 225 aa13.55□□□□□ -0.24
TSSC4-210ENST00000496468 FRMD6-AS1P0C7T7 363 aa13.55□□□□□ -0.24
TSSC4-210ENST00000496468 PRB4P10163 310 aaPredicted RBP13.55□□□□□ -0.24
TSSC4-210ENST00000496468 HIST1H1AQ02539 215 aaPredicted RBP13.55□□□□□ -0.24
TSSC4-210ENST00000496468 DEFB121Q5J5C9 76 aa13.55□□□□□ -0.24
TSSC4-210ENST00000496468 TRPT1Q86TN4 253 aaKnown RBP13.55□□□□□ -0.24
TSSC4-210ENST00000496468 OR8A1Q8NGG7 326 aa13.55□□□□□ -0.24
TSSC4-210ENST00000496468 RPH3ALQ9UNE2 315 aa13.55□□□□□ -0.24
TSSC4-210ENST00000496468 YTHDF2Q9Y5A9 579 aaKnown RBP13.55□□□□□ -0.24
TSSC4-210ENST00000496468 LOC102724200A0A096LPH7 203 aaPredicted RBP13.54□□□□□ -0.24
TSSC4-210ENST00000496468 RBMY1BA6NDE4 496 aaKnown RBP13.54□□□□□ -0.24
TSSC4-210ENST00000496468 PGPA6NDG6 321 aa13.54□□□□□ -0.24
TSSC4-210ENST00000496468 RBMY1EA6NEQ0 496 aaKnown RBP13.54□□□□□ -0.24
TSSC4-210ENST00000496468 FAM74A7A6NL05 159 aa13.54□□□□□ -0.24
TSSC4-210ENST00000496468 PRAC2D3DTV9 90 aa13.54□□□□□ -0.24
TSSC4-210ENST00000496468 H3BMM0 161 aa13.54□□□□□ -0.24
TSSC4-210ENST00000496468 DUSP14O95147 198 aaKnown RBP13.54□□□□□ -0.24
TSSC4-210ENST00000496468 RBMY1DP0C7P1 496 aaKnown RBP13.54□□□□□ -0.24
TSSC4-210ENST00000496468 RPL35AP18077 110 aaKnown RBP13.54□□□□□ -0.24
TSSC4-210ENST00000496468 OR10J6PQ8NGY7 276 aa13.54□□□□□ -0.24
TSSC4-210ENST00000496468 MANBALQ9NQG1 85 aa13.54□□□□□ -0.24
TSSC4-210ENST00000496468 MEGF8Q7Z7M0 2845 aa13.54□□□□□ -0.24
TSSC4-210ENST00000496468 SLC25A5P05141 298 aaKnown RBP13.53□□□□□ -0.24
TSSC4-210ENST00000496468 ZNF705DP0CH99 300 aaPredicted RBP13.53□□□□□ -0.24
TSSC4-210ENST00000496468 ZNF705BP0CI00 300 aaPredicted RBP13.53□□□□□ -0.24
TSSC4-210ENST00000496468 CNN1P51911 297 aaKnown RBP13.53□□□□□ -0.24
TSSC4-210ENST00000496468 C5orf17Q8NAS9 161 aa13.53□□□□□ -0.24
TSSC4-210ENST00000496468 OR4B1Q8NGF8 309 aa13.53□□□□□ -0.24
TSSC4-210ENST00000496468 RXFP4Q8TDU9 374 aa13.53□□□□□ -0.24
TSSC4-210ENST00000496468 NKX6-2Q9C056 277 aaPredicted RBP13.53□□□□□ -0.24
TSSC4-210ENST00000496468 GNG13Q9P2W3 67 aa13.53□□□□□ -0.24
TSSC4-210ENST00000496468 IGKV2-40A0A087WW87 121 aaPredicted RBP13.52□□□□□ -0.25
TSSC4-210ENST00000496468 IFNA1P01562 189 aa13.52□□□□□ -0.25
TSSC4-210ENST00000496468 IGKV2D-40P01614 121 aaPredicted RBP13.52□□□□□ -0.25
TSSC4-210ENST00000496468 IGKV3-20P01619 116 aa13.52□□□□□ -0.25
TSSC4-210ENST00000496468 APOC4P55056 127 aa13.52□□□□□ -0.25
TSSC4-210ENST00000496468 CCL20P78556 96 aa13.52□□□□□ -0.25
TSSC4-210ENST00000496468 CST9LP1Q5W188 147 aa13.52□□□□□ -0.25
TSSC4-210ENST00000496468 PAGE4O60829 102 aa13.51□□□□□ -0.25
TSSC4-210ENST00000496468 SUMO1P63165 101 aaKnown RBP13.51□□□□□ -0.25
TSSC4-210ENST00000496468 GNG5P63218 68 aa13.51□□□□□ -0.25
TSSC4-210ENST00000496468 DIRC3C9JPN6 131 aa13.5□□□□□ -0.25
TSSC4-210ENST00000496468 NPIPB6E9PJ23 425 aa13.5□□□□□ -0.25
TSSC4-210ENST00000496468 ATP5G3P48201 142 aa13.5□□□□□ -0.25
TSSC4-210ENST00000496468 LINC00322Q6ZN03 302 aaPredicted RBP13.5□□□□□ -0.25
TSSC4-210ENST00000496468 ARL6IP6Q8N6S5 226 aa13.5□□□□□ -0.25
TSSC4-210ENST00000496468 KIR2DL5BA0A0G2JN68 375 aa13.49□□□□□ -0.25
TSSC4-210ENST00000496468 KIR2DL5BA0A0G2JPC4 375 aa13.49□□□□□ -0.25
TSSC4-210ENST00000496468 A8MTW9 85 aa13.49□□□□□ -0.25
TSSC4-210ENST00000496468 NUTF2P61970 127 aaKnown RBP13.49□□□□□ -0.25
TSSC4-210ENST00000496468 MORN3Q6PF18 240 aaPredicted RBP13.49□□□□□ -0.25
TSSC4-210ENST00000496468 GOLT1AQ6ZVE7 132 aa13.49□□□□□ -0.25
TSSC4-210ENST00000496468 ZNF767PQ75MW2 155 aa13.49□□□□□ -0.25
TSSC4-210ENST00000496468 KIR2DL5AQ8N109 375 aa13.49□□□□□ -0.25
TSSC4-210ENST00000496468 KIR2DL5BQ8NHK3 375 aa13.49□□□□□ -0.25
TSSC4-210ENST00000496468 LYPD6BQ8NI32 183 aa13.49□□□□□ -0.25
TSSC4-210ENST00000496468 PCNPQ8WW12 178 aaKnown RBP13.49□□□□□ -0.25
TSSC4-210ENST00000496468 CLUHP3Q96NS8 147 aa13.49□□□□□ -0.25
TSSC4-210ENST00000496468 TCEAL7Q9BRU2 100 aa13.49□□□□□ -0.25
TSSC4-210ENST00000496468 ATG101Q9BSB4 218 aa13.49□□□□□ -0.25
TSSC4-210ENST00000496468 PPP1R14DQ9NXH3 145 aa13.49□□□□□ -0.25
TSSC4-210ENST00000496468 AGRNO00468 2067 aa13.49□□□□□ -0.25
TSSC4-210ENST00000496468 FBN3Q75N90 2809 aa13.49□□□□□ -0.25
TSSC4-210ENST00000496468 SERTM2A0A1B0GWG4 89 aa13.48□□□□□ -0.25
TSSC4-210ENST00000496468 RBAKDNA6NC62 111 aa13.48□□□□□ -0.25
TSSC4-210ENST00000496468 C11orf94C9JXX5 98 aa13.48□□□□□ -0.25
TSSC4-210ENST00000496468 CA1P00915 261 aaPredicted RBP13.48□□□□□ -0.25
TSSC4-210ENST00000496468 TCRAP04437 139 aa13.48□□□□□ -0.25
TSSC4-210ENST00000496468 BCL2P10415 239 aa13.48□□□□□ -0.25
TSSC4-210ENST00000496468 TMEM78Q5T7P6 136 aa13.48□□□□□ -0.25
TSSC4-210ENST00000496468 EPDR1Q9UM22 224 aa13.48□□□□□ -0.25
TSSC4-210ENST00000496468 K7EQM0 130 aa13.47□□□□□ -0.25
TSSC4-210ENST00000496468 PEX7O00628 323 aa13.47□□□□□ -0.25
TSSC4-210ENST00000496468 NMBP08949 121 aa13.47□□□□□ -0.25
TSSC4-210ENST00000496468 ERCC8Q13216 396 aa13.47□□□□□ -0.25
TSSC4-210ENST00000496468 CYB561D1Q8N8Q1 229 aa13.47□□□□□ -0.25
TSSC4-210ENST00000496468 VGLL1Q99990 258 aa13.47□□□□□ -0.25
TSSC4-210ENST00000496468 CSTL1Q9H114 145 aa13.47□□□□□ -0.25
TSSC4-210ENST00000496468 SLC35B3Q9H1N7 401 aa13.47□□□□□ -0.25
TSSC4-210ENST00000496468 PRKDCP78527 4128 aaKnown RBP13.46□□□□□ -0.25
TSSC4-210ENST00000496468 TAGLN2P37802 199 aaKnown RBP13.46□□□□□ -0.25
TSSC4-210ENST00000496468 RAB14P61106 215 aa13.46□□□□□ -0.25
TSSC4-210ENST00000496468 IFITM2Q01629 132 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 180.7 ms