RNA–Protein interactions for RNA: ENST00000496445.5

VTI1A-209, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-209ENST00000496445 Q6ZRG5 221 aa10.06□□□□□ -0.8
VTI1A-209ENST00000496445 LINC00336Q6ZUF6 198 aa10.06□□□□□ -0.8
VTI1A-209ENST00000496445 UBE2DNLQ8IWF7 75 aa10.06□□□□□ -0.8
VTI1A-209ENST00000496445 TMEM256Q8N2U0 113 aa10.06□□□□□ -0.8
VTI1A-209ENST00000496445 DNAJC4Q9NNZ3 241 aa10.06□□□□□ -0.8
VTI1A-209ENST00000496445 PPP1R14DQ9NXH3 145 aa10.06□□□□□ -0.8
VTI1A-209ENST00000496445 LRP1BQ9NZR2 4599 aa10.06□□□□□ -0.8
VTI1A-209ENST00000496445 DEFB130BP0DP73 79 aa10.05□□□□□ -0.8
VTI1A-209ENST00000496445 DEFB130AP0DP74 79 aa10.05□□□□□ -0.8
VTI1A-209ENST00000496445 S100A11P31949 105 aa10.05□□□□□ -0.8
VTI1A-209ENST00000496445 RPL29P47914 159 aaKnown RBP10.05□□□□□ -0.8
VTI1A-209ENST00000496445 BAXQ07812 192 aa10.05□□□□□ -0.8
VTI1A-209ENST00000496445 LGALS9BQ3B8N2 356 aa10.05□□□□□ -0.8
VTI1A-209ENST00000496445 GFI1BQ5VTD9 330 aa10.05□□□□□ -0.8
VTI1A-209ENST00000496445 MZT2BQ6NZ67 158 aa10.05□□□□□ -0.8
VTI1A-209ENST00000496445 STX12Q86Y82 276 aa10.05□□□□□ -0.8
VTI1A-209ENST00000496445 OR1L4Q8NGR5 311 aa10.05□□□□□ -0.8
VTI1A-209ENST00000496445 RNASE8Q8TDE3 154 aaKnown RBP10.05□□□□□ -0.8
VTI1A-209ENST00000496445 C16orf74Q96GX8 76 aa10.05□□□□□ -0.8
VTI1A-209ENST00000496445 SLC39A9Q9NUM3 307 aa10.05□□□□□ -0.8
VTI1A-209ENST00000496445 PXMP4Q9Y6I8 212 aa10.05□□□□□ -0.8
VTI1A-209ENST00000496445 DNAH5Q8TE73 4624 aa10.05□□□□□ -0.8
VTI1A-209ENST00000496445 IGLV2-18A0A075B6J9 118 aa10.04□□□□□ -0.8
VTI1A-209ENST00000496445 FGF7P21781 194 aa10.04□□□□□ -0.8
VTI1A-209ENST00000496445 IFITM3Q01628 133 aa10.04□□□□□ -0.8
VTI1A-209ENST00000496445 RNF212Q495C1 297 aa10.04□□□□□ -0.8
VTI1A-209ENST00000496445 Q6ZR54 194 aa10.04□□□□□ -0.8
VTI1A-209ENST00000496445 CHAC2Q8WUX2 184 aa10.04□□□□□ -0.8
VTI1A-209ENST00000496445 S100ZQ8WXG8 99 aa10.04□□□□□ -0.8
VTI1A-209ENST00000496445 PFDN5Q99471 154 aa10.04□□□□□ -0.8
VTI1A-209ENST00000496445 ZNF586Q9NXT0 402 aa10.04□□□□□ -0.8
VTI1A-209ENST00000496445 PCLOQ9Y6V0 5065 aa10.03□□□□□ -0.8
VTI1A-209ENST00000496445 H7BYZ3 331 aa10.03□□□□□ -0.8
VTI1A-209ENST00000496445 SIX6O95475 246 aa10.03□□□□□ -0.8
VTI1A-209ENST00000496445 CT45A10P0DMU9 189 aa10.03□□□□□ -0.8
VTI1A-209ENST00000496445 HTN1P15515 57 aa10.03□□□□□ -0.8
VTI1A-209ENST00000496445 HBG1P69891 147 aa10.03□□□□□ -0.8
VTI1A-209ENST00000496445 HBG2P69892 147 aa10.03□□□□□ -0.8
VTI1A-209ENST00000496445 C15orf53Q8NAA6 179 aa10.03□□□□□ -0.8
VTI1A-209ENST00000496445 OR10J6PQ8NGY7 276 aa10.03□□□□□ -0.8
VTI1A-209ENST00000496445 TMEM263Q8WUH6 116 aaKnown RBP10.03□□□□□ -0.8
VTI1A-209ENST00000496445 NPCDR1Q9BY65 106 aa10.03□□□□□ -0.8
VTI1A-209ENST00000496445 GPN1Q9HCN4 374 aaPredicted RBP10.03□□□□□ -0.8
VTI1A-209ENST00000496445 TRBV19A0A075B6N1 114 aa10.02□□□□□ -0.81
VTI1A-209ENST00000496445 NPIPB6E9PJ23 425 aa10.02□□□□□ -0.81
VTI1A-209ENST00000496445 ZNF253O75346 499 aa10.02□□□□□ -0.81
VTI1A-209ENST00000496445 UPK1BO75841 260 aa10.02□□□□□ -0.81
VTI1A-209ENST00000496445 GUK1Q16774 197 aa10.02□□□□□ -0.81
VTI1A-209ENST00000496445 ATP6V1FQ16864 119 aa10.02□□□□□ -0.81
VTI1A-209ENST00000496445 GCSAMLQ5JQS6 135 aa10.02□□□□□ -0.81
VTI1A-209ENST00000496445 ENKURQ8TC29 256 aa10.02□□□□□ -0.81
VTI1A-209ENST00000496445 C20orf144Q9BQM9 153 aa10.02□□□□□ -0.81
VTI1A-209ENST00000496445 PRSS29PA6NIE9 313 aa10.01□□□□□ -0.81
VTI1A-209ENST00000496445 F5H768 121 aa10.01□□□□□ -0.81
VTI1A-209ENST00000496445 H0YIZ8 118 aa10.01□□□□□ -0.81
VTI1A-209ENST00000496445 M0R3E3 92 aa10.01□□□□□ -0.81
VTI1A-209ENST00000496445 NDUFB4O95168 129 aa10.01□□□□□ -0.81
VTI1A-209ENST00000496445 PYYP10082 97 aa10.01□□□□□ -0.81
VTI1A-209ENST00000496445 NHLH2Q02577 135 aa10.01□□□□□ -0.81
VTI1A-209ENST00000496445 ZNF493Q6ZR52 646 aa10.01□□□□□ -0.81
VTI1A-209ENST00000496445 ODF3Q96PU9 254 aa10.01□□□□□ -0.81
VTI1A-209ENST00000496445 NOP10Q9NPE3 64 aaKnown RBP10.01□□□□□ -0.81
VTI1A-209ENST00000496445 OR5AC2Q9NZP5 309 aa10.01□□□□□ -0.81
VTI1A-209ENST00000496445 TMEM14CQ9P0S9 112 aa10.01□□□□□ -0.81
VTI1A-209ENST00000496445 TIMM8BQ9Y5J9 83 aaPredicted RBP10.01□□□□□ -0.81
VTI1A-209ENST00000496445 A6NHS1 94 aa10□□□□□ -0.81
VTI1A-209ENST00000496445 CBY3A6NI87 242 aa10□□□□□ -0.81
VTI1A-209ENST00000496445 J3KRW8 73 aa10□□□□□ -0.81
VTI1A-209ENST00000496445 MPDU1O75352 247 aa10□□□□□ -0.81
VTI1A-209ENST00000496445 ATP5G1P05496 136 aa10□□□□□ -0.81
VTI1A-209ENST00000496445 ATP5G3P48201 142 aa10□□□□□ -0.81
VTI1A-209ENST00000496445 LINC00612Q8N6U2 182 aa10□□□□□ -0.81
VTI1A-209ENST00000496445 OR5C1Q8NGR4 320 aa10□□□□□ -0.81
VTI1A-209ENST00000496445 THAP6Q8TBB0 222 aa10□□□□□ -0.81
VTI1A-209ENST00000496445 MRPL53Q96EL3 112 aaKnown RBP10□□□□□ -0.81
VTI1A-209ENST00000496445 SLC25A2Q9BXI2 301 aa10□□□□□ -0.81
VTI1A-209ENST00000496445 NMES1Q9C002 83 aa10□□□□□ -0.81
VTI1A-209ENST00000496445 HSPG2P98160 4391 aa10□□□□□ -0.81
VTI1A-209ENST00000496445 ERCC8Q13216 396 aa9.99□□□□□ -0.81
VTI1A-209ENST00000496445 LRRC37A5PQ49AS3 106 aa9.99□□□□□ -0.81
VTI1A-209ENST00000496445 C4orf48Q5BLP8 95 aa9.99□□□□□ -0.81
VTI1A-209ENST00000496445 RNF141Q8WVD5 230 aa9.99□□□□□ -0.81
VTI1A-209ENST00000496445 FAM167A-AS1Q96KT0 104 aa9.99□□□□□ -0.81
VTI1A-209ENST00000496445 KRTAP17-1Q9BYP8 105 aa9.99□□□□□ -0.81
VTI1A-209ENST00000496445 TRAV12-3A0A0B4J271 114 aa9.98□□□□□ -0.81
VTI1A-209ENST00000496445 E5RGE8 158 aa9.98□□□□□ -0.81
VTI1A-209ENST00000496445 NUDT3O95989 172 aa9.98□□□□□ -0.81
VTI1A-209ENST00000496445 HIST1H1EP10412 219 aaKnown RBP9.98□□□□□ -0.81
VTI1A-209ENST00000496445 LEPP41159 167 aa9.98□□□□□ -0.81
VTI1A-209ENST00000496445 H2BFSP57053 126 aa9.98□□□□□ -0.81
VTI1A-209ENST00000496445 PDE6HQ13956 83 aa9.98□□□□□ -0.81
VTI1A-209ENST00000496445 CLINT1Q14677 625 aa9.98□□□□□ -0.81
VTI1A-209ENST00000496445 EXOC3-AS1Q8N2X6 119 aa9.98□□□□□ -0.81
VTI1A-209ENST00000496445 FAM19A4Q96LR4 140 aa9.98□□□□□ -0.81
VTI1A-209ENST00000496445 PTTG2Q9NZH5 202 aa9.98□□□□□ -0.81
VTI1A-209ENST00000496445 ABCA13Q86UQ4 5058 aa9.98□□□□□ -0.81
VTI1A-209ENST00000496445 APOBP04114 4563 aaKnown RBP9.98□□□□□ -0.81
VTI1A-209ENST00000496445 INMT-MINDY4F8WBC2 141 aa9.97□□□□□ -0.81
VTI1A-209ENST00000496445 PRAF2O60831 178 aa9.97□□□□□ -0.81
VTI1A-209ENST00000496445 FAM3BP58499 235 aaPredicted RBP9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms