RNA–Protein interactions for RNA: ENST00000496047.5

USP39-219, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-219ENST00000496047 CLEC19AQ6UXS0 136 aa5.4□□□□□ -1.54
USP39-219ENST00000496047 PRNTQ86SH4 94 aa5.4□□□□□ -1.54
USP39-219ENST00000496047 CIARTQ8N365 385 aaPredicted RBP5.4□□□□□ -1.54
USP39-219ENST00000496047 NHLRC2Q8NBF2 726 aa5.4□□□□□ -1.54
USP39-219ENST00000496047 TSKUQ8WUA8 353 aa5.4□□□□□ -1.54
USP39-219ENST00000496047 AJUBAQ96IF1 538 aa5.4□□□□□ -1.54
USP39-219ENST00000496047 GFRA4Q9GZZ7 299 aa5.4□□□□□ -1.54
USP39-219ENST00000496047 ZNF580Q9UK33 172 aa5.4□□□□□ -1.54
USP39-219ENST00000496047 S4R3C0 116 aa5.4□□□□□ -1.54
USP39-219ENST00000496047 HRNRQ86YZ3 2850 aaPredicted RBP5.39□□□□□ -1.55
USP39-219ENST00000496047 MED13LQ71F56 2210 aa5.39□□□□□ -1.55
USP39-219ENST00000496047 HIVEP1P15822 2718 aa5.39□□□□□ -1.55
USP39-219ENST00000496047 FAM231BA6NCW3 169 aa5.39□□□□□ -1.55
USP39-219ENST00000496047 NDUFA4O00483 81 aa5.39□□□□□ -1.55
USP39-219ENST00000496047 IGLV2-8P01709 118 aa5.39□□□□□ -1.55
USP39-219ENST00000496047 CLEC3BP05452 202 aa5.39□□□□□ -1.55
USP39-219ENST00000496047 CTSGP08311 255 aa5.39□□□□□ -1.55
USP39-219ENST00000496047 RNF224P0DH78 156 aa5.39□□□□□ -1.55
USP39-219ENST00000496047 PF4V1P10720 104 aa5.39□□□□□ -1.55
USP39-219ENST00000496047 CRISP2P16562 243 aa5.39□□□□□ -1.55
USP39-219ENST00000496047 IER3P46695 156 aa5.39□□□□□ -1.55
USP39-219ENST00000496047 RPS20P60866 119 aaKnown RBP5.39□□□□□ -1.55
USP39-219ENST00000496047 RPL15P61313 204 aaKnown RBP5.39□□□□□ -1.55
USP39-219ENST00000496047 Q5PR19 223 aa5.39□□□□□ -1.55
USP39-219ENST00000496047 SAMD13Q5VXD3 122 aa5.39□□□□□ -1.55
USP39-219ENST00000496047 PRSS57Q6UWY2 283 aa5.39□□□□□ -1.55
USP39-219ENST00000496047 SIGLEC15Q6ZMC9 328 aa5.39□□□□□ -1.55
USP39-219ENST00000496047 HIST3H2BBQ8N257 126 aa5.39□□□□□ -1.55
USP39-219ENST00000496047 EXOC3-AS1Q8N2X6 119 aa5.39□□□□□ -1.55
USP39-219ENST00000496047 NUDT10Q8NFP7 164 aa5.39□□□□□ -1.55
USP39-219ENST00000496047 NUDT11Q96G61 164 aa5.39□□□□□ -1.55
USP39-219ENST00000496047 ZNF414Q96IQ9 312 aa5.39□□□□□ -1.55
USP39-219ENST00000496047 MS4A10Q96PG2 267 aa5.39□□□□□ -1.55
USP39-219ENST00000496047 PSG8Q9UQ74 426 aa5.39□□□□□ -1.55
USP39-219ENST00000496047 NBEAL1Q6ZS30 2694 aa5.39□□□□□ -1.55
USP39-219ENST00000496047 PDZD2O15018 2839 aa5.38□□□□□ -1.55
USP39-219ENST00000496047 CSMD1Q96PZ7 3565 aa5.38□□□□□ -1.55
USP39-219ENST00000496047 A0A1B0GW15 77 aa5.38□□□□□ -1.55
USP39-219ENST00000496047 TMEM89A2RUT3 159 aa5.38□□□□□ -1.55
USP39-219ENST00000496047 RBAKDNA6NC62 111 aa5.38□□□□□ -1.55
USP39-219ENST00000496047 DIRC3C9JPN6 131 aa5.38□□□□□ -1.55
USP39-219ENST00000496047 G3V318 75 aa5.38□□□□□ -1.55
USP39-219ENST00000496047 H3BTX0 84 aa5.38□□□□□ -1.55
USP39-219ENST00000496047 MRPS12O15235 138 aaKnown RBP5.38□□□□□ -1.55
USP39-219ENST00000496047 SNRPCP09234 159 aaKnown RBP5.38□□□□□ -1.55
USP39-219ENST00000496047 FABP4P15090 132 aa5.38□□□□□ -1.55
USP39-219ENST00000496047 TCL1AP56279 114 aa5.38□□□□□ -1.55
USP39-219ENST00000496047 HBBP68871 147 aa5.38□□□□□ -1.55
USP39-219ENST00000496047 FBLN7Q53RD9 439 aa5.38□□□□□ -1.55
USP39-219ENST00000496047 PDZD11Q5EBL8 140 aa5.38□□□□□ -1.55
USP39-219ENST00000496047 OR10J3Q5JRS4 329 aa5.38□□□□□ -1.55
USP39-219ENST00000496047 COA6Q5JTJ3 125 aaKnown RBP5.38□□□□□ -1.55
USP39-219ENST00000496047 DNLZQ5SXM8 178 aa5.38□□□□□ -1.55
USP39-219ENST00000496047 CYB5R2Q6BCY4 276 aa5.38□□□□□ -1.55
USP39-219ENST00000496047 MRPL54Q6P161 138 aaKnown RBP5.38□□□□□ -1.55
USP39-219ENST00000496047 TOMM20LQ6UXN7 152 aa5.38□□□□□ -1.55
USP39-219ENST00000496047 RBPMS2Q6ZRY4 209 aaKnown RBP5.38□□□□□ -1.55
USP39-219ENST00000496047 C9orf139Q6ZV77 190 aa5.38□□□□□ -1.55
USP39-219ENST00000496047 BAGE3Q86Y29 109 aa5.38□□□□□ -1.55
USP39-219ENST00000496047 WIPF2Q8TF74 440 aaPredicted RBP5.38□□□□□ -1.55
USP39-219ENST00000496047 MBD6Q96DN6 1003 aa5.38□□□□□ -1.55
USP39-219ENST00000496047 MRPL53Q96EL3 112 aaKnown RBP5.38□□□□□ -1.55
USP39-219ENST00000496047 PACRGQ96M98 296 aaPredicted RBP5.38□□□□□ -1.55
USP39-219ENST00000496047 NPFFR1Q9GZQ6 430 aa5.38□□□□□ -1.55
USP39-219ENST00000496047 HIGD1CA8MV81 97 aa5.37□□□□□ -1.55
USP39-219ENST00000496047 CHEK1O14757 476 aa5.37□□□□□ -1.55
USP39-219ENST00000496047 APCSP02743 223 aa5.37□□□□□ -1.55
USP39-219ENST00000496047 CBLN1P23435 193 aa5.37□□□□□ -1.55
USP39-219ENST00000496047 PAFAH1B2P68402 229 aa5.37□□□□□ -1.55
USP39-219ENST00000496047 RIGQ13278 110 aa5.37□□□□□ -1.55
USP39-219ENST00000496047 SCGB2A2Q13296 93 aa5.37□□□□□ -1.55
USP39-219ENST00000496047 C19orf54Q5BKX5 351 aa5.37□□□□□ -1.55
USP39-219ENST00000496047 OR2D3Q8NGH3 330 aa5.37□□□□□ -1.55
USP39-219ENST00000496047 OR10D4PQ8NGN7 298 aa5.37□□□□□ -1.55
USP39-219ENST00000496047 LINC00479Q96M42 142 aa5.37□□□□□ -1.55
USP39-219ENST00000496047 SAMD10Q9BYL1 202 aa5.37□□□□□ -1.55
USP39-219ENST00000496047 PRSS22Q9GZN4 317 aa5.37□□□□□ -1.55
USP39-219ENST00000496047 NIT2Q9NQR4 276 aa5.37□□□□□ -1.55
USP39-219ENST00000496047 ADGRG4Q8IZF6 3080 aa5.37□□□□□ -1.55
USP39-219ENST00000496047 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP5.36□□□□□ -1.55
USP39-219ENST00000496047 C19orf71A6NCJ1 209 aa5.36□□□□□ -1.55
USP39-219ENST00000496047 SH2D7A6NKC9 451 aaPredicted RBP5.36□□□□□ -1.55
USP39-219ENST00000496047 PHOX2AO14813 284 aa5.36□□□□□ -1.55
USP39-219ENST00000496047 BUB3O43684 328 aa5.36□□□□□ -1.55
USP39-219ENST00000496047 IGHV4-31P0DP07 118 aa5.36□□□□□ -1.55
USP39-219ENST00000496047 DEFB112Q30KQ8 113 aa5.36□□□□□ -1.55
USP39-219ENST00000496047 FAM106AQ4KMX7 169 aa5.36□□□□□ -1.55
USP39-219ENST00000496047 TM4SF20Q53R12 229 aa5.36□□□□□ -1.55
USP39-219ENST00000496047 TMEM78Q5T7P6 136 aa5.36□□□□□ -1.55
USP39-219ENST00000496047 TMEM136Q6ZRR5 245 aa5.36□□□□□ -1.55
USP39-219ENST00000496047 PIFOQ8TCI5 191 aa5.36□□□□□ -1.55
USP39-219ENST00000496047 NRGNQ92686 78 aa5.36□□□□□ -1.55
USP39-219ENST00000496047 SGK494Q96LW2 274 aa5.36□□□□□ -1.55
USP39-219ENST00000496047 Q96MF0 132 aa5.36□□□□□ -1.55
USP39-219ENST00000496047 NEU1Q99519 415 aa5.36□□□□□ -1.55
USP39-219ENST00000496047 MLST8Q9BVC4 326 aa5.36□□□□□ -1.55
USP39-219ENST00000496047 GPR61Q9BZJ8 451 aa5.36□□□□□ -1.55
USP39-219ENST00000496047 VPREB3Q9UKI3 123 aa5.36□□□□□ -1.55
USP39-219ENST00000496047 CELSR2Q9HCU4 2923 aa5.35□□□□□ -1.55
USP39-219ENST00000496047 IGHV3-35A0A0C4DH35 117 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 110 ms