RNA–Protein interactions for RNA: ENST00000495485.1

HDAC3-214, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 797 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-214ENST00000495485 UBE2E2Q96LR5 201 aa7.89□□□□□ -1.15
HDAC3-214ENST00000495485 YPEL4Q96NS1 127 aa7.89□□□□□ -1.15
HDAC3-214ENST00000495485 PYGO2Q9BRQ0 406 aa7.89□□□□□ -1.15
HDAC3-214ENST00000495485 NDFIP1Q9BT67 221 aa7.89□□□□□ -1.15
HDAC3-214ENST00000495485 SRD5A3Q9H8P0 318 aa7.89□□□□□ -1.15
HDAC3-214ENST00000495485 SERTAD4Q9NUC0 356 aa7.89□□□□□ -1.15
HDAC3-214ENST00000495485 U3KQE9 123 aa7.89□□□□□ -1.15
HDAC3-214ENST00000495485 DNHD1Q96M86 4753 aa7.89□□□□□ -1.15
HDAC3-214ENST00000495485 TRRAPQ9Y4A5 3859 aa7.89□□□□□ -1.15
HDAC3-214ENST00000495485 A0A1W2PPQ1 181 aa7.88□□□□□ -1.15
HDAC3-214ENST00000495485 ZNF320A2RRD8 509 aa7.88□□□□□ -1.15
HDAC3-214ENST00000495485 RBAKDNA6NC62 111 aa7.88□□□□□ -1.15
HDAC3-214ENST00000495485 PGPEP1LA6NFU8 196 aa7.88□□□□□ -1.15
HDAC3-214ENST00000495485 DIRC3C9JPN6 131 aa7.88□□□□□ -1.15
HDAC3-214ENST00000495485 IGHV3-11P01762 117 aa7.88□□□□□ -1.15
HDAC3-214ENST00000495485 CT45A10P0DMU9 189 aa7.88□□□□□ -1.15
HDAC3-214ENST00000495485 GNG5P63218 68 aa7.88□□□□□ -1.15
HDAC3-214ENST00000495485 Q6ZS46 218 aa7.88□□□□□ -1.15
HDAC3-214ENST00000495485 GOLT1AQ6ZVE7 132 aa7.88□□□□□ -1.15
HDAC3-214ENST00000495485 TMEM183AQ8IXX5 376 aa7.88□□□□□ -1.15
HDAC3-214ENST00000495485 OR4B1Q8NGF8 309 aa7.88□□□□□ -1.15
HDAC3-214ENST00000495485 LINC01006Q8NI28 216 aa7.88□□□□□ -1.15
HDAC3-214ENST00000495485 ZNF747Q9BV97 191 aa7.88□□□□□ -1.15
HDAC3-214ENST00000495485 KLK15Q9H2R5 256 aa7.88□□□□□ -1.15
HDAC3-214ENST00000495485 ZNF331Q9NQX6 463 aaPredicted RBP7.88□□□□□ -1.15
HDAC3-214ENST00000495485 DAZ1Q9NQZ3 744 aaKnown RBP7.88□□□□□ -1.15
HDAC3-214ENST00000495485 AURKAIP1Q9NWT8 199 aaPredicted RBP7.88□□□□□ -1.15
HDAC3-214ENST00000495485 ZNF492Q9P255 531 aa7.88□□□□□ -1.15
HDAC3-214ENST00000495485 RNF114Q9Y508 228 aa7.88□□□□□ -1.15
HDAC3-214ENST00000495485 MGAM2Q2M2H8 2515 aa7.88□□□□□ -1.15
HDAC3-214ENST00000495485 PKD1L1Q8TDX9 2849 aa7.88□□□□□ -1.15
HDAC3-214ENST00000495485 TGIF2-C20orf24A0A0A6YYL0 155 aa7.87□□□□□ -1.15
HDAC3-214ENST00000495485 TRAV34A0A0B4J273 112 aa7.87□□□□□ -1.15
HDAC3-214ENST00000495485 A8MWL6 223 aa7.87□□□□□ -1.15
HDAC3-214ENST00000495485 H3BTX0 84 aa7.87□□□□□ -1.15
HDAC3-214ENST00000495485 K7EN84 100 aa7.87□□□□□ -1.15
HDAC3-214ENST00000495485 M0QZ24 198 aa7.87□□□□□ -1.15
HDAC3-214ENST00000495485 TYMSP04818 313 aa7.87□□□□□ -1.15
HDAC3-214ENST00000495485 SNRPCP09234 159 aaKnown RBP7.87□□□□□ -1.15
HDAC3-214ENST00000495485 LGALS1P09382 135 aaKnown RBP7.87□□□□□ -1.15
HDAC3-214ENST00000495485 SHISA2Q6UWI4 295 aa7.87□□□□□ -1.15
HDAC3-214ENST00000495485 PRNTQ86SH4 94 aa7.87□□□□□ -1.15
HDAC3-214ENST00000495485 C3orf56Q8N813 242 aa7.87□□□□□ -1.15
HDAC3-214ENST00000495485 RNF152Q8N8N0 203 aa7.87□□□□□ -1.15
HDAC3-214ENST00000495485 PSG8Q9UQ74 426 aa7.87□□□□□ -1.15
HDAC3-214ENST00000495485 IGHV7-4-1A0A0J9YVY3 117 aa7.86□□□□□ -1.15
HDAC3-214ENST00000495485 XKRY2A2RUG3 117 aa7.86□□□□□ -1.15
HDAC3-214ENST00000495485 LGALS9O00182 355 aa7.86□□□□□ -1.15
HDAC3-214ENST00000495485 IGLV2-8P01709 118 aa7.86□□□□□ -1.15
HDAC3-214ENST00000495485 P01737 135 aa7.86□□□□□ -1.15
HDAC3-214ENST00000495485 CXCL1P09341 107 aa7.86□□□□□ -1.15
HDAC3-214ENST00000495485 ID1P41134 155 aa7.86□□□□□ -1.15
HDAC3-214ENST00000495485 CDX1P47902 265 aaPredicted RBP7.86□□□□□ -1.15
HDAC3-214ENST00000495485 PROK1P58294 105 aa7.86□□□□□ -1.15
HDAC3-214ENST00000495485 OR5I1Q13606 314 aa7.86□□□□□ -1.15
HDAC3-214ENST00000495485 CT83Q5H943 113 aa7.86□□□□□ -1.15
HDAC3-214ENST00000495485 WDR73Q6P4I2 378 aa7.86□□□□□ -1.15
HDAC3-214ENST00000495485 Q86TA4 180 aa7.86□□□□□ -1.15
HDAC3-214ENST00000495485 GBGT1Q8N5D6 347 aa7.86□□□□□ -1.15
HDAC3-214ENST00000495485 C16orf92Q96LL3 132 aa7.86□□□□□ -1.15
HDAC3-214ENST00000495485 LINC00479Q96M42 142 aa7.86□□□□□ -1.15
HDAC3-214ENST00000495485 C17orf77Q96MU5 243 aa7.86□□□□□ -1.15
HDAC3-214ENST00000495485 MDFIQ99750 246 aa7.86□□□□□ -1.15
HDAC3-214ENST00000495485 SAV1Q9H4B6 383 aaPredicted RBP7.86□□□□□ -1.15
HDAC3-214ENST00000495485 VWFP04275 2813 aa7.85□□□□□ -1.15
HDAC3-214ENST00000495485 IGHV3OR16-8A0A075B7F1 116 aa7.85□□□□□ -1.15
HDAC3-214ENST00000495485 FAM231BA6NCW3 169 aa7.85□□□□□ -1.15
HDAC3-214ENST00000495485 ZNF207O43670 478 aaKnown RBP7.85□□□□□ -1.15
HDAC3-214ENST00000495485 TMEM95Q3KNT9 176 aa7.85□□□□□ -1.15
HDAC3-214ENST00000495485 PRR27Q6MZM9 219 aa7.85□□□□□ -1.15
HDAC3-214ENST00000495485 RASL11AQ6T310 242 aa7.85□□□□□ -1.15
HDAC3-214ENST00000495485 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.85□□□□□ -1.15
HDAC3-214ENST00000495485 REC114Q7Z4M0 266 aa7.85□□□□□ -1.15
HDAC3-214ENST00000495485 KLHDC1Q8N7A1 406 aa7.85□□□□□ -1.15
HDAC3-214ENST00000495485 MYOZ3Q8TDC0 251 aa7.85□□□□□ -1.15
HDAC3-214ENST00000495485 GLMPQ8WWB7 406 aa7.85□□□□□ -1.15
HDAC3-214ENST00000495485 MLST8Q9BVC4 326 aa7.85□□□□□ -1.15
HDAC3-214ENST00000495485 SMAD5-AS1Q9Y6J3 95 aa7.85□□□□□ -1.15
HDAC3-214ENST00000495485 V9GYV3 84 aa7.85□□□□□ -1.15
HDAC3-214ENST00000495485 NOTCH3Q9UM47 2321 aa7.84□□□□□ -1.15
HDAC3-214ENST00000495485 IZUMO1RA6ND01 250 aa7.84□□□□□ -1.15
HDAC3-214ENST00000495485 SLC17A3O00476 420 aa7.84□□□□□ -1.15
HDAC3-214ENST00000495485 CHEK1O14757 476 aa7.84□□□□□ -1.15
HDAC3-214ENST00000495485 MT-ND6P03923 174 aa7.84□□□□□ -1.15
HDAC3-214ENST00000495485 RPLP1P05386 114 aaKnown RBP7.84□□□□□ -1.15
HDAC3-214ENST00000495485 RPL11P62913 178 aaKnown RBP7.84□□□□□ -1.15
HDAC3-214ENST00000495485 TMEM78Q5T7P6 136 aa7.84□□□□□ -1.15
HDAC3-214ENST00000495485 LCN12Q6JVE5 192 aa7.84□□□□□ -1.15
HDAC3-214ENST00000495485 NUDT10Q8NFP7 164 aa7.84□□□□□ -1.15
HDAC3-214ENST00000495485 TSKUQ8WUA8 353 aa7.84□□□□□ -1.15
HDAC3-214ENST00000495485 DPF1Q92782 380 aa7.84□□□□□ -1.15
HDAC3-214ENST00000495485 NUDT11Q96G61 164 aa7.84□□□□□ -1.15
HDAC3-214ENST00000495485 RHPN1-AS1Q9BWJ2 59 aa7.84□□□□□ -1.15
HDAC3-214ENST00000495485 GFRA4Q9GZZ7 299 aa7.84□□□□□ -1.15
HDAC3-214ENST00000495485 RNASE7Q9H1E1 156 aaKnown RBP7.84□□□□□ -1.15
HDAC3-214ENST00000495485 RPP21Q9H633 154 aaKnown RBP7.84□□□□□ -1.15
HDAC3-214ENST00000495485 PEMTQ9UBM1 199 aa7.84□□□□□ -1.15
HDAC3-214ENST00000495485 NAT8BQ9UHF3 227 aa7.84□□□□□ -1.15
HDAC3-214ENST00000495485 SMPXQ9UHP9 88 aa7.84□□□□□ -1.15
HDAC3-214ENST00000495485 NBEAL1Q6ZS30 2694 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms