RNA–Protein interactions for RNA: ENST00000492816.6

FN1-224, Transcript of fibronectin 1, humanhuman

TSL 5

Gene FN1, Length 9,171 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-224ENST00000492816 ZNF236Q9UL36 1845 aa4.35□□□□□ -1.71
FN1-224ENST00000492816 ADAMTSL1Q8N6G6 1762 aa4.35□□□□□ -1.71
FN1-224ENST00000492816 IGKV2-40A0A087WW87 121 aaPredicted RBP4.35□□□□□ -1.71
FN1-224ENST00000492816 IGKV2D-40P01614 121 aaPredicted RBP4.35□□□□□ -1.71
FN1-224ENST00000492816 IGHV3-30P01768 117 aa4.35□□□□□ -1.71
FN1-224ENST00000492816 IGHV3-33P01772 117 aa4.35□□□□□ -1.71
FN1-224ENST00000492816 IGHV3-30-3P0DP02 117 aa4.35□□□□□ -1.71
FN1-224ENST00000492816 IGHV3-30-5P0DP03 117 aa4.35□□□□□ -1.71
FN1-224ENST00000492816 PLP1P60201 277 aa4.35□□□□□ -1.71
FN1-224ENST00000492816 GFI1BQ5VTD9 330 aa4.35□□□□□ -1.71
FN1-224ENST00000492816 Q8TCH9 128 aa4.35□□□□□ -1.71
FN1-224ENST00000492816 CITED2Q99967 270 aaPredicted RBP4.35□□□□□ -1.71
FN1-224ENST00000492816 NCKAP5O14513 1909 aa4.35□□□□□ -1.71
FN1-224ENST00000492816 IGHV3-16A0A0C4DH30 117 aa4.35□□□□□ -1.71
FN1-224ENST00000492816 MUC21A0A0G2JKD1 596 aa4.35□□□□□ -1.71
FN1-224ENST00000492816 MUC21A0A140T8X8 626 aa4.35□□□□□ -1.71
FN1-224ENST00000492816 DNAJC9-AS1A6NH13 148 aa4.35□□□□□ -1.71
FN1-224ENST00000492816 LYPD2Q6UXB3 125 aa4.35□□□□□ -1.71
FN1-224ENST00000492816 TRAV8-3A0A0A6YYJ7 113 aa4.35□□□□□ -1.71
FN1-224ENST00000492816 TRAV26-2A0A0B4J265 109 aa4.35□□□□□ -1.71
FN1-224ENST00000492816 KNCNA6PVL3 124 aa4.35□□□□□ -1.71
FN1-224ENST00000492816 C9JQL5 133 aa4.35□□□□□ -1.71
FN1-224ENST00000492816 C9orf47Q6ZRZ4 202 aa4.35□□□□□ -1.71
FN1-224ENST00000492816 OR10D4PQ8NGN7 298 aa4.35□□□□□ -1.71
FN1-224ENST00000492816 MARVELD1Q9BSK0 173 aa4.34□□□□□ -1.71
FN1-224ENST00000492816 IL36BQ9NZH7 164 aa4.34□□□□□ -1.71
FN1-224ENST00000492816 PDE6HQ13956 83 aa4.34□□□□□ -1.71
FN1-224ENST00000492816 ZNF506Q5JVG8 444 aa4.34□□□□□ -1.71
FN1-224ENST00000492816 ZFAND6Q6FIF0 208 aa4.34□□□□□ -1.71
FN1-224ENST00000492816 TREML4Q6UXN2 200 aa4.34□□□□□ -1.71
FN1-224ENST00000492816 GSN-AS1Q9NRJ2 163 aa4.34□□□□□ -1.71
FN1-224ENST00000492816 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.34□□□□□ -1.711e-14■■■■■ 33.2
FN1-224ENST00000492816 IGHV3-64A0A075B6Q5 118 aa4.34□□□□□ -1.71
FN1-224ENST00000492816 LY6G6EA0A0G2JKS1 128 aa4.34□□□□□ -1.71
FN1-224ENST00000492816 NPIPB5A8MRT5 1133 aa4.34□□□□□ -1.71
FN1-224ENST00000492816 NHLRC4P0CG21 123 aaPredicted RBP4.34□□□□□ -1.71
FN1-224ENST00000492816 TRBV5-5A0A0J9YX44 114 aa4.34□□□□□ -1.71
FN1-224ENST00000492816 LINC00518Q8N0U6 118 aa4.34□□□□□ -1.71
FN1-224ENST00000492816 SMPXQ9UHP9 88 aa4.34□□□□□ -1.71
FN1-224ENST00000492816 ZNF706Q9Y5V0 76 aaPredicted RBP4.34□□□□□ -1.71
FN1-224ENST00000492816 PMS2P5A8MQ11 134 aa4.34□□□□□ -1.71
FN1-224ENST00000492816 DKK1O94907 266 aa4.34□□□□□ -1.71
FN1-224ENST00000492816 ERG28Q9UKR5 140 aa4.34□□□□□ -1.71
FN1-224ENST00000492816 TMEM89A2RUT3 159 aa4.34□□□□□ -1.72
FN1-224ENST00000492816 RNF222A6NCQ9 220 aa4.34□□□□□ -1.72
FN1-224ENST00000492816 DEFB135Q30KP9 77 aa4.34□□□□□ -1.72
FN1-224ENST00000492816 ADAMTS9Q9P2N4 1935 aa4.34□□□□□ -1.72
FN1-224ENST00000492816 SIP14410 1827 aa4.34□□□□□ -1.72
FN1-224ENST00000492816 Q6ZQT7 251 aa4.34□□□□□ -1.72
FN1-224ENST00000492816 FAM24BQ8N5W8 94 aa4.34□□□□□ -1.72
FN1-224ENST00000492816 COL4A1P02462 1669 aa4.33□□□□□ -1.72
FN1-224ENST00000492816 IGKV1-39P01597 117 aa4.33□□□□□ -1.72
FN1-224ENST00000492816 IGKV1D-39P04432 117 aa4.33□□□□□ -1.72
FN1-224ENST00000492816 NDUFA1O15239 70 aa4.33□□□□□ -1.72
FN1-224ENST00000492816 ATP5L2Q7Z4Y8 100 aa4.33□□□□□ -1.72
FN1-224ENST00000492816 HSPB9Q9BQS6 159 aa4.33□□□□□ -1.72
FN1-224ENST00000492816 PKDREJQ9NTG1 2253 aa4.33□□□□□ -1.72
FN1-224ENST00000492816 USF3Q68DE3 2245 aa4.33□□□□□ -1.72
FN1-224ENST00000492816 TRAV9-1A0A075B6T8 112 aa4.33□□□□□ -1.72
FN1-224ENST00000492816 DEFB131BA0A096LNP1 70 aa4.33□□□□□ -1.72
FN1-224ENST00000492816 IGHV4-61A0A0C4DH41 118 aa4.33□□□□□ -1.72
FN1-224ENST00000492816 CD55P08174 381 aa4.33□□□□□ -1.72
FN1-224ENST00000492816 HIST1H4AP62805 103 aaKnown RBP4.33□□□□□ -1.72
FN1-224ENST00000492816 CLPSL2Q6UWE3 100 aa4.33□□□□□ -1.72
FN1-224ENST00000492816 GVINP1Q7Z2Y8 2422 aa4.33□□□□□ -1.72
FN1-224ENST00000492816 GREM1O60565 184 aa4.33□□□□□ -1.72
FN1-224ENST00000492816 IGKV1-16P04430 117 aa4.33□□□□□ -1.72
FN1-224ENST00000492816 HOXB4P17483 251 aaPredicted RBP4.33□□□□□ -1.72
FN1-224ENST00000492816 ZNF134P52741 427 aa4.33□□□□□ -1.72
FN1-224ENST00000492816 PLPPR1Q8TBJ4 325 aa4.33□□□□□ -1.72
FN1-224ENST00000492816 ATRXP46100 2492 aa4.33□□□□□ -1.72
FN1-224ENST00000492816 TRBV6-7A0A0A0MS04 114 aa4.33□□□□□ -1.72
FN1-224ENST00000492816 FAM236DA0A1B0GTK5 79 aa4.33□□□□□ -1.72
FN1-224ENST00000492816 IZUMO1RA6ND01 250 aa4.33□□□□□ -1.72
FN1-224ENST00000492816 K7ERS5 55 aa4.33□□□□□ -1.72
FN1-224ENST00000492816 FAM236CP0DP71 79 aa4.33□□□□□ -1.72
FN1-224ENST00000492816 PFN2P35080 140 aa4.33□□□□□ -1.72
FN1-224ENST00000492816 MIXL1Q9H2W2 232 aa4.33□□□□□ -1.72
FN1-224ENST00000492816 HIVEP2P31629 2446 aa4.33□□□□□ -1.72
FN1-224ENST00000492816 MUC6Q6W4X9 2439 aa4.33□□□□□ -1.72
FN1-224ENST00000492816 SPATA45Q537H7 98 aa4.33□□□□□ -1.72
FN1-224ENST00000492816 CASC2Q6XLA1 102 aa4.33□□□□□ -1.72
FN1-224ENST00000492816 RPP25LQ8N5L8 163 aaKnown RBP4.33□□□□□ -1.72
FN1-224ENST00000492816 DEFB105AQ8NG35 78 aa4.33□□□□□ -1.72
FN1-224ENST00000492816 A0A1W2PRE2 83 aa4.32□□□□□ -1.72
FN1-224ENST00000492816 TGFBR3LH3BV60 316 aa4.32□□□□□ -1.72
FN1-224ENST00000492816 COX7A2LO14548 114 aa4.32□□□□□ -1.72
FN1-224ENST00000492816 RPL23P62829 140 aaKnown RBP4.32□□□□□ -1.72
FN1-224ENST00000492816 HERVK_113P63121 156 aa4.32□□□□□ -1.72
FN1-224ENST00000492816 MIR17HGQ75NE6 70 aa4.32□□□□□ -1.72
FN1-224ENST00000492816 C17orf82Q86X59 251 aaPredicted RBP4.32□□□□□ -1.72
FN1-224ENST00000492816 KIAA1671Q9BY89 1806 aa4.32□□□□□ -1.72
FN1-224ENST00000492816 KLK9Q9UKQ9 250 aa4.32□□□□□ -1.72
FN1-224ENST00000492816 A0A087WWL8 130 aa4.32□□□□□ -1.72
FN1-224ENST00000492816 CENPVL1A0A0U1RR11 272 aa4.32□□□□□ -1.72
FN1-224ENST00000492816 ESDP10768 282 aa4.32□□□□□ -1.72
FN1-224ENST00000492816 VOPP1Q96AW1 172 aa4.32□□□□□ -1.72
FN1-224ENST00000492816 PLXND1Q9Y4D7 1925 aa4.32□□□□□ -1.72
FN1-224ENST00000492816 PCNX2A6NKB5 2137 aa4.32□□□□□ -1.72
FN1-224ENST00000492816 EGR2P11161 476 aaPredicted RBP4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 128.6 ms