RNA–Protein interactions for RNA: ENST00000489758.1

CLIC4-203, Transcript of chloride intracellular channel 4, humanhuman

TSL 2

Gene CLIC4, Length 439 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-203ENST00000489758 CCL20P78556 96 aa11.88□□□□□ -0.51
CLIC4-203ENST00000489758 ACTL10Q5JWF8 245 aa11.88□□□□□ -0.51
CLIC4-203ENST00000489758 LINC00322Q6ZN03 302 aaPredicted RBP11.88□□□□□ -0.51
CLIC4-203ENST00000489758 FOXI2Q6ZQN5 318 aa11.88□□□□□ -0.51
CLIC4-203ENST00000489758 RPUSD4Q96CM3 377 aaKnown RBP11.88□□□□□ -0.51
CLIC4-203ENST00000489758 AAMDCQ9H7C9 122 aa11.88□□□□□ -0.51
CLIC4-203ENST00000489758 OTORQ9NRC9 128 aa11.88□□□□□ -0.51
CLIC4-203ENST00000489758 PRELID1Q9Y255 219 aa11.88□□□□□ -0.51
CLIC4-203ENST00000489758 YTHDF2Q9Y5A9 579 aaKnown RBP11.88□□□□□ -0.51
CLIC4-203ENST00000489758 A0A0J9YX75 114 aa11.87□□□□□ -0.51
CLIC4-203ENST00000489758 GGTLC3B5MD39 225 aa11.87□□□□□ -0.51
CLIC4-203ENST00000489758 HLA-DRB4P13762 266 aa11.87□□□□□ -0.51
CLIC4-203ENST00000489758 HLA-DRB4X5D2U9 266 aa11.87□□□□□ -0.51
CLIC4-203ENST00000489758 A0A1W2PRE2 83 aa11.86□□□□□ -0.51
CLIC4-203ENST00000489758 H3BMM0 161 aa11.86□□□□□ -0.51
CLIC4-203ENST00000489758 HBE1P02100 147 aa11.86□□□□□ -0.51
CLIC4-203ENST00000489758 TRPT1Q86TN4 253 aaKnown RBP11.86□□□□□ -0.51
CLIC4-203ENST00000489758 MRAPQ8TCY5 172 aa11.86□□□□□ -0.51
CLIC4-203ENST00000489758 TUBA4BQ9H853 241 aa11.86□□□□□ -0.51
CLIC4-203ENST00000489758 PGPA6NDG6 321 aa11.85□□□□□ -0.51
CLIC4-203ENST00000489758 FAM74A7A6NL05 159 aa11.85□□□□□ -0.51
CLIC4-203ENST00000489758 A8MTW9 85 aa11.85□□□□□ -0.51
CLIC4-203ENST00000489758 IFNA7P01567 189 aa11.85□□□□□ -0.51
CLIC4-203ENST00000489758 FRMD6-AS1P0C7T7 363 aa11.85□□□□□ -0.51
CLIC4-203ENST00000489758 ZNF705DP0CH99 300 aaPredicted RBP11.85□□□□□ -0.51
CLIC4-203ENST00000489758 ZNF705BP0CI00 300 aaPredicted RBP11.85□□□□□ -0.51
CLIC4-203ENST00000489758 UBE2G2P60604 165 aa11.85□□□□□ -0.51
CLIC4-203ENST00000489758 BLOC1S1P78537 153 aa11.85□□□□□ -0.51
CLIC4-203ENST00000489758 OR8A1Q8NGG7 326 aa11.85□□□□□ -0.51
CLIC4-203ENST00000489758 LYPD6BQ8NI32 183 aa11.85□□□□□ -0.51
CLIC4-203ENST00000489758 CNN1P51911 297 aaKnown RBP11.84□□□□□ -0.51
CLIC4-203ENST00000489758 IFITM2Q01629 132 aa11.84□□□□□ -0.51
CLIC4-203ENST00000489758 DEFB121Q5J5C9 76 aa11.84□□□□□ -0.51
CLIC4-203ENST00000489758 EBLN2Q6P2I7 272 aa11.84□□□□□ -0.51
CLIC4-203ENST00000489758 STHQ8IWL8 128 aa11.84□□□□□ -0.51
CLIC4-203ENST00000489758 CLUHP3Q96NS8 147 aa11.84□□□□□ -0.51
CLIC4-203ENST00000489758 ARL2-SNX15V9GYD0 113 aa11.84□□□□□ -0.51
CLIC4-203ENST00000489758 LOC102724200A0A096LPH7 203 aaPredicted RBP11.83□□□□□ -0.52
CLIC4-203ENST00000489758 DIRC3C9JPN6 131 aa11.83□□□□□ -0.52
CLIC4-203ENST00000489758 TEX46H3BTG2 121 aa11.83□□□□□ -0.52
CLIC4-203ENST00000489758 PAGE4O60829 102 aa11.83□□□□□ -0.52
CLIC4-203ENST00000489758 RPL35AP18077 110 aaKnown RBP11.83□□□□□ -0.52
CLIC4-203ENST00000489758 SUMO1P63165 101 aaKnown RBP11.83□□□□□ -0.52
CLIC4-203ENST00000489758 HIST1H1AQ02539 215 aaPredicted RBP11.83□□□□□ -0.52
CLIC4-203ENST00000489758 PMS2P11Q13670 270 aa11.83□□□□□ -0.52
CLIC4-203ENST00000489758 AMTNQ6UX39 209 aa11.83□□□□□ -0.52
CLIC4-203ENST00000489758 CCDC28AQ8IWP9 274 aa11.83□□□□□ -0.52
CLIC4-203ENST00000489758 IGKV2-40A0A087WW87 121 aaPredicted RBP11.82□□□□□ -0.52
CLIC4-203ENST00000489758 NPIPB6E9PJ23 425 aa11.82□□□□□ -0.52
CLIC4-203ENST00000489758 DUSP14O95147 198 aaKnown RBP11.82□□□□□ -0.52
CLIC4-203ENST00000489758 IGKV2D-40P01614 121 aaPredicted RBP11.82□□□□□ -0.52
CLIC4-203ENST00000489758 PPT1P50897 306 aa11.82□□□□□ -0.52
CLIC4-203ENST00000489758 GNG5P63218 68 aa11.82□□□□□ -0.52
CLIC4-203ENST00000489758 ARL6IP6Q8N6S5 226 aa11.82□□□□□ -0.52
CLIC4-203ENST00000489758 C5orf17Q8NAS9 161 aa11.82□□□□□ -0.52
CLIC4-203ENST00000489758 RXFP4Q8TDU9 374 aa11.82□□□□□ -0.52
CLIC4-203ENST00000489758 GNG13Q9P2W3 67 aa11.82□□□□□ -0.52
CLIC4-203ENST00000489758 SORL1Q92673 2214 aa11.81□□□□□ -0.52
CLIC4-203ENST00000489758 IGKV3-20P01619 116 aa11.81□□□□□ -0.52
CLIC4-203ENST00000489758 SLC25A5P05141 298 aaKnown RBP11.81□□□□□ -0.52
CLIC4-203ENST00000489758 NMBP08949 121 aa11.81□□□□□ -0.52
CLIC4-203ENST00000489758 GIG44P09565 113 aaPredicted RBP11.81□□□□□ -0.52
CLIC4-203ENST00000489758 CSN1S1P47710 185 aa11.81□□□□□ -0.52
CLIC4-203ENST00000489758 ATP5G3P48201 142 aa11.81□□□□□ -0.52
CLIC4-203ENST00000489758 OR4B1Q8NGF8 309 aa11.81□□□□□ -0.52
CLIC4-203ENST00000489758 OR10J6PQ8NGY7 276 aa11.81□□□□□ -0.52
CLIC4-203ENST00000489758 CMTM2Q8TAZ6 248 aa11.81□□□□□ -0.52
CLIC4-203ENST00000489758 PCNPQ8WW12 178 aaKnown RBP11.81□□□□□ -0.52
CLIC4-203ENST00000489758 NKX6-2Q9C056 277 aaPredicted RBP11.81□□□□□ -0.52
CLIC4-203ENST00000489758 MANBALQ9NQG1 85 aa11.81□□□□□ -0.52
CLIC4-203ENST00000489758 EPDR1Q9UM22 224 aa11.81□□□□□ -0.52
CLIC4-203ENST00000489758 KIR2DL5BA0A0G2JN68 375 aa11.8□□□□□ -0.52
CLIC4-203ENST00000489758 KIR2DL5BA0A0G2JPC4 375 aa11.8□□□□□ -0.52
CLIC4-203ENST00000489758 RBAKDNA6NC62 111 aa11.8□□□□□ -0.52
CLIC4-203ENST00000489758 TCRAP04437 139 aa11.8□□□□□ -0.52
CLIC4-203ENST00000489758 ERCC8Q13216 396 aa11.8□□□□□ -0.52
CLIC4-203ENST00000489758 CST9LP1Q5W188 147 aa11.8□□□□□ -0.52
CLIC4-203ENST00000489758 C9orf47Q6ZRZ4 202 aa11.8□□□□□ -0.52
CLIC4-203ENST00000489758 KIR2DL5AQ8N109 375 aa11.8□□□□□ -0.52
CLIC4-203ENST00000489758 KIR2DL5BQ8NHK3 375 aa11.8□□□□□ -0.52
CLIC4-203ENST00000489758 VGLL1Q99990 258 aa11.8□□□□□ -0.52
CLIC4-203ENST00000489758 AGPAT4-IT1Q9H0P7 198 aa11.8□□□□□ -0.52
CLIC4-203ENST00000489758 CT45A10P0DMU9 189 aa11.79□□□□□ -0.52
CLIC4-203ENST00000489758 HAGHQ16775 308 aa11.79□□□□□ -0.52
CLIC4-203ENST00000489758 MORN3Q6PF18 240 aaPredicted RBP11.79□□□□□ -0.52
CLIC4-203ENST00000489758 GOLT1AQ6ZVE7 132 aa11.79□□□□□ -0.52
CLIC4-203ENST00000489758 CSTL1Q9H114 145 aa11.79□□□□□ -0.52
CLIC4-203ENST00000489758 SLC35B3Q9H1N7 401 aa11.79□□□□□ -0.52
CLIC4-203ENST00000489758 RPH3ALQ9UNE2 315 aa11.79□□□□□ -0.52
CLIC4-203ENST00000489758 BCL2P10415 239 aa11.78□□□□□ -0.52
CLIC4-203ENST00000489758 APOC4P55056 127 aa11.78□□□□□ -0.52
CLIC4-203ENST00000489758 ZNF767PQ75MW2 155 aa11.78□□□□□ -0.52
CLIC4-203ENST00000489758 SBSPONQ8IVN8 264 aa11.78□□□□□ -0.52
CLIC4-203ENST00000489758 FAM19A4Q96LR4 140 aa11.78□□□□□ -0.52
CLIC4-203ENST00000489758 LINC00477Q96M19 166 aa11.78□□□□□ -0.52
CLIC4-203ENST00000489758 TCEAL7Q9BRU2 100 aa11.78□□□□□ -0.52
CLIC4-203ENST00000489758 ATG101Q9BSB4 218 aa11.78□□□□□ -0.52
CLIC4-203ENST00000489758 SERTM2A0A1B0GWG4 89 aa11.77□□□□□ -0.53
CLIC4-203ENST00000489758 C11orf94C9JXX5 98 aa11.77□□□□□ -0.53
CLIC4-203ENST00000489758 ODF3Q96PU9 254 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms