RNA–Protein interactions for RNA: ENST00000485412.1

SQSTM1-208, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 656 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-208ENST00000485412 TMPRSS5Q9H3S3 457 aa9.55□□□□□ -0.88
SQSTM1-208ENST00000485412 A0A1W2PPQ1 181 aa9.54□□□□□ -0.88
SQSTM1-208ENST00000485412 AGPAT2O15120 278 aa9.54□□□□□ -0.88
SQSTM1-208ENST00000485412 M6PRP20645 277 aa9.54□□□□□ -0.88
SQSTM1-208ENST00000485412 S100A7P31151 101 aa9.54□□□□□ -0.88
SQSTM1-208ENST00000485412 OPCMLQ14982 345 aa9.54□□□□□ -0.88
SQSTM1-208ENST00000485412 BAK1Q16611 211 aa9.54□□□□□ -0.88
SQSTM1-208ENST00000485412 TEPPQ6URK8 271 aa9.54□□□□□ -0.88
SQSTM1-208ENST00000485412 LCN15Q6UWW0 184 aa9.54□□□□□ -0.88
SQSTM1-208ENST00000485412 Q6ZTI0 123 aa9.54□□□□□ -0.88
SQSTM1-208ENST00000485412 OR10J6PQ8NGY7 276 aa9.54□□□□□ -0.88
SQSTM1-208ENST00000485412 MGST2Q99735 147 aa9.54□□□□□ -0.88
SQSTM1-208ENST00000485412 NPVFQ9HCQ7 196 aa9.54□□□□□ -0.88
SQSTM1-208ENST00000485412 ZNF586Q9NXT0 402 aa9.54□□□□□ -0.88
SQSTM1-208ENST00000485412 VPS13BQ7Z7G8 4022 aa9.53□□□□□ -0.88
SQSTM1-208ENST00000485412 TRAV5A0A0B4J249 113 aa9.53□□□□□ -0.88
SQSTM1-208ENST00000485412 TRAV12-3A0A0B4J271 114 aa9.53□□□□□ -0.88
SQSTM1-208ENST00000485412 NDUFB6O95139 128 aa9.53□□□□□ -0.88
SQSTM1-208ENST00000485412 OR4E1P0C645 316 aa9.53□□□□□ -0.88
SQSTM1-208ENST00000485412 CT45A10P0DMU9 189 aa9.53□□□□□ -0.88
SQSTM1-208ENST00000485412 IGLC2P0DOY2 106 aa9.53□□□□□ -0.88
SQSTM1-208ENST00000485412 BTCP35070 178 aa9.53□□□□□ -0.88
SQSTM1-208ENST00000485412 FRZBQ92765 325 aa9.53□□□□□ -0.88
SQSTM1-208ENST00000485412 SAT2Q96F10 170 aaPredicted RBP9.53□□□□□ -0.88
SQSTM1-208ENST00000485412 UPK3BQ9BT76 320 aa9.53□□□□□ -0.88
SQSTM1-208ENST00000485412 FNDC10F2Z333 226 aa9.52□□□□□ -0.89
SQSTM1-208ENST00000485412 GOSR2O14653 212 aa9.52□□□□□ -0.89
SQSTM1-208ENST00000485412 EREGO14944 169 aa9.52□□□□□ -0.89
SQSTM1-208ENST00000485412 CXCL2P19875 107 aa9.52□□□□□ -0.89
SQSTM1-208ENST00000485412 IAH1Q2TAA2 248 aaPredicted RBP9.52□□□□□ -0.89
SQSTM1-208ENST00000485412 Q5VSD8 79 aa9.52□□□□□ -0.89
SQSTM1-208ENST00000485412 LYPD1Q8N2G4 141 aa9.52□□□□□ -0.89
SQSTM1-208ENST00000485412 OR10P1Q8NGE3 313 aa9.52□□□□□ -0.89
SQSTM1-208ENST00000485412 ZNF503Q96F45 646 aa9.52□□□□□ -0.89
SQSTM1-208ENST00000485412 VSIG2Q96IQ7 327 aa9.52□□□□□ -0.89
SQSTM1-208ENST00000485412 SLC50A1Q9BRV3 221 aa9.52□□□□□ -0.89
SQSTM1-208ENST00000485412 MGAT4CQ9UBM8 478 aa9.52□□□□□ -0.89
SQSTM1-208ENST00000485412 MRPS16Q9Y3D3 137 aaKnown RBP9.52□□□□□ -0.89
SQSTM1-208ENST00000485412 C7orf66A4D0T2 115 aa9.51□□□□□ -0.89
SQSTM1-208ENST00000485412 CCSO14618 274 aa9.51□□□□□ -0.89
SQSTM1-208ENST00000485412 COX7A2P2O60397 106 aa9.51□□□□□ -0.89
SQSTM1-208ENST00000485412 MBPP02686 304 aaPredicted RBP9.51□□□□□ -0.89
SQSTM1-208ENST00000485412 RLN2P04090 185 aa9.51□□□□□ -0.89
SQSTM1-208ENST00000485412 LINC00315P59091 139 aa9.51□□□□□ -0.89
SQSTM1-208ENST00000485412 RGS21Q2M5E4 152 aa9.51□□□□□ -0.89
SQSTM1-208ENST00000485412 Q6ZRN7 208 aaPredicted RBP9.51□□□□□ -0.89
SQSTM1-208ENST00000485412 ZNF546Q86UE3 836 aa9.51□□□□□ -0.89
SQSTM1-208ENST00000485412 ZNF431Q8TF32 576 aaPredicted RBP9.51□□□□□ -0.89
SQSTM1-208ENST00000485412 DEDD2Q8WXF8 326 aa9.51□□□□□ -0.89
SQSTM1-208ENST00000485412 C20orf144Q9BQM9 153 aa9.51□□□□□ -0.89
SQSTM1-208ENST00000485412 PGPEP1Q9NXJ5 209 aa9.51□□□□□ -0.89
SQSTM1-208ENST00000485412 GSKIPQ9P0R6 139 aa9.51□□□□□ -0.89
SQSTM1-208ENST00000485412 MYCBP2O75592 4640 aa9.51□□□□□ -0.89
SQSTM1-208ENST00000485412 DNAH8Q96JB1 4490 aa9.5□□□□□ -0.89
SQSTM1-208ENST00000485412 A0A096LPF7 62 aa9.5□□□□□ -0.89
SQSTM1-208ENST00000485412 NPIPB6E9PJ23 425 aa9.5□□□□□ -0.89
SQSTM1-208ENST00000485412 M0R3E3 92 aa9.5□□□□□ -0.89
SQSTM1-208ENST00000485412 PFDN1O60925 122 aa9.5□□□□□ -0.89
SQSTM1-208ENST00000485412 TSC22D2O75157 780 aa9.5□□□□□ -0.89
SQSTM1-208ENST00000485412 IL7P13232 177 aa9.5□□□□□ -0.89
SQSTM1-208ENST00000485412 DEFA1P59665 94 aa9.5□□□□□ -0.89
SQSTM1-208ENST00000485412 DEFA3P59666 94 aa9.5□□□□□ -0.89
SQSTM1-208ENST00000485412 ERCC8Q13216 396 aa9.5□□□□□ -0.89
SQSTM1-208ENST00000485412 MIC13Q5XKP0 118 aa9.5□□□□□ -0.89
SQSTM1-208ENST00000485412 BPIFA4PQ86YQ2 179 aa9.5□□□□□ -0.89
SQSTM1-208ENST00000485412 GSN-AS1Q9NRJ2 163 aa9.5□□□□□ -0.89
SQSTM1-208ENST00000485412 SNURFLB1AK76 121 aa9.49□□□□□ -0.89
SQSTM1-208ENST00000485412 ERVFC1-1P60608 527 aa9.49□□□□□ -0.89
SQSTM1-208ENST00000485412 C4orf46Q504U0 113 aa9.49□□□□□ -0.89
SQSTM1-208ENST00000485412 C10orf113Q5VZT2 155 aa9.49□□□□□ -0.89
SQSTM1-208ENST00000485412 Q6ZQT7 251 aa9.49□□□□□ -0.89
SQSTM1-208ENST00000485412 CCDC28AQ8IWP9 274 aa9.49□□□□□ -0.89
SQSTM1-208ENST00000485412 C11orf72Q8NBR9 251 aa9.49□□□□□ -0.89
SQSTM1-208ENST00000485412 TNFRSF18Q9Y5U5 241 aa9.49□□□□□ -0.89
SQSTM1-208ENST00000485412 PTTG1O95997 202 aa9.48□□□□□ -0.89
SQSTM1-208ENST00000485412 XGP55808 180 aa9.48□□□□□ -0.89
SQSTM1-208ENST00000485412 TAS2R30P59541 319 aa9.48□□□□□ -0.89
SQSTM1-208ENST00000485412 CD300CQ08708 224 aa9.48□□□□□ -0.89
SQSTM1-208ENST00000485412 BTN1A1Q13410 526 aa9.48□□□□□ -0.89
SQSTM1-208ENST00000485412 ASAH1Q13510 395 aa9.48□□□□□ -0.89
SQSTM1-208ENST00000485412 PXDC1Q5TGL8 231 aa9.48□□□□□ -0.89
SQSTM1-208ENST00000485412 CDPF1Q6NVV7 123 aa9.48□□□□□ -0.89
SQSTM1-208ENST00000485412 NRARPQ7Z6K4 114 aa9.48□□□□□ -0.89
SQSTM1-208ENST00000485412 C11orf1Q9H5F2 150 aa9.48□□□□□ -0.89
SQSTM1-208ENST00000485412 PXMP4Q9Y6I8 212 aa9.48□□□□□ -0.89
SQSTM1-208ENST00000485412 H3BNG1 76 aa9.47□□□□□ -0.89
SQSTM1-208ENST00000485412 CST7O76096 145 aa9.47□□□□□ -0.89
SQSTM1-208ENST00000485412 LEPP41159 167 aa9.47□□□□□ -0.89
SQSTM1-208ENST00000485412 CAMLGP49069 296 aa9.47□□□□□ -0.89
SQSTM1-208ENST00000485412 DAZ2Q13117 558 aaKnown RBP9.47□□□□□ -0.89
SQSTM1-208ENST00000485412 S100A7AQ86SG5 101 aa9.47□□□□□ -0.89
SQSTM1-208ENST00000485412 MITD1Q8WV92 249 aa9.47□□□□□ -0.89
SQSTM1-208ENST00000485412 ODF3Q96PU9 254 aa9.47□□□□□ -0.89
SQSTM1-208ENST00000485412 KLF12Q9Y4X4 402 aa9.47□□□□□ -0.89
SQSTM1-208ENST00000485412 FLG2Q5D862 2391 aaPredicted RBP9.47□□□□□ -0.89
SQSTM1-208ENST00000485412 FAM24AA6NFZ4 105 aa9.46□□□□□ -0.9
SQSTM1-208ENST00000485412 PLA2G10O15496 165 aa9.46□□□□□ -0.9
SQSTM1-208ENST00000485412 NDUFB4O95168 129 aa9.46□□□□□ -0.9
SQSTM1-208ENST00000485412 IFNA5P01569 189 aa9.46□□□□□ -0.9
SQSTM1-208ENST00000485412 PRR9Q5T870 116 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms