RNA–Protein interactions for RNA: ENST00000478582.5

CCM2-211, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 937 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-211ENST00000478582 UBE2L3P68036 154 aaKnown RBP19.59■□□□□ 0.73
CCM2-211ENST00000478582 RNF183Q96D59 192 aa19.59■□□□□ 0.73
CCM2-211ENST00000478582 RETNQ9HD89 108 aa19.59■□□□□ 0.73
CCM2-211ENST00000478582 PRELID1Q9Y255 219 aa19.59■□□□□ 0.73
CCM2-211ENST00000478582 EIF3GO75821 320 aaKnown RBP eCLIP19.58■□□□□ 0.72
CCM2-211ENST00000478582 AKR1C8PQ5T2L2 129 aa19.58■□□□□ 0.72
CCM2-211ENST00000478582 BAP18Q8IXM2 172 aa19.58■□□□□ 0.72
CCM2-211ENST00000478582 OR4B1Q8NGF8 309 aa19.58■□□□□ 0.72
CCM2-211ENST00000478582 OR8A1Q8NGG7 326 aa19.58■□□□□ 0.72
CCM2-211ENST00000478582 STOML3Q8TAV4 291 aa19.58■□□□□ 0.72
CCM2-211ENST00000478582 EDA2RQ9HAV5 297 aa19.58■□□□□ 0.72
CCM2-211ENST00000478582 ZNF705FA8MVS1 300 aaPredicted RBP19.57■□□□□ 0.72
CCM2-211ENST00000478582 SPRY2O43597 315 aa19.57■□□□□ 0.72
CCM2-211ENST00000478582 C4BPBP20851 252 aa19.57■□□□□ 0.72
CCM2-211ENST00000478582 DEFB135Q30KP9 77 aa19.57■□□□□ 0.72
CCM2-211ENST00000478582 ZFP69Q49AA0 526 aa19.57■□□□□ 0.72
CCM2-211ENST00000478582 LYPD1Q8N2G4 141 aa19.57■□□□□ 0.72
CCM2-211ENST00000478582 AAMDCQ9H7C9 122 aa19.57■□□□□ 0.72
CCM2-211ENST00000478582 HMGB3O15347 200 aaKnown RBP19.56■□□□□ 0.72
CCM2-211ENST00000478582 TPT1P13693 172 aaKnown RBP19.56■□□□□ 0.72
CCM2-211ENST00000478582 CNN1P51911 297 aaKnown RBP19.56■□□□□ 0.72
CCM2-211ENST00000478582 IGKV3-20P01619 116 aa19.55■□□□□ 0.72
CCM2-211ENST00000478582 ARL14EPLP0DKL9 152 aa19.55■□□□□ 0.72
CCM2-211ENST00000478582 AMTNQ6UX39 209 aa19.55■□□□□ 0.72
CCM2-211ENST00000478582 EXOC3-AS1Q8N2X6 119 aa19.55■□□□□ 0.72
CCM2-211ENST00000478582 PHYHIPLQ96FC7 376 aa19.55■□□□□ 0.72
CCM2-211ENST00000478582 C1QTNF4Q9BXJ3 329 aa19.55■□□□□ 0.72
CCM2-211ENST00000478582 CTXND1A0A1B0GTU2 59 aa19.54■□□□□ 0.72
CCM2-211ENST00000478582 PRAC2D3DTV9 90 aa19.54■□□□□ 0.72
CCM2-211ENST00000478582 ZNF705DP0CH99 300 aaPredicted RBP19.54■□□□□ 0.72
CCM2-211ENST00000478582 ZNF705BP0CI00 300 aaPredicted RBP19.54■□□□□ 0.72
CCM2-211ENST00000478582 ZNF726P1Q15940 193 aa19.54■□□□□ 0.72
CCM2-211ENST00000478582 SSX7Q7RTT5 188 aa19.54■□□□□ 0.72
CCM2-211ENST00000478582 C9orf62Q8N4C0 152 aa19.54■□□□□ 0.72
CCM2-211ENST00000478582 SUN5Q8TC36 379 aa19.54■□□□□ 0.72
CCM2-211ENST00000478582 PLA2G2EQ9NZK7 142 aa19.54■□□□□ 0.72
CCM2-211ENST00000478582 UMAD1C9J7I0 102 aa19.53■□□□□ 0.72
CCM2-211ENST00000478582 CXorf1O96002 111 aa19.53■□□□□ 0.72
CCM2-211ENST00000478582 HIST1H1AQ02539 215 aaPredicted RBP19.53■□□□□ 0.72
CCM2-211ENST00000478582 ICAM4Q14773 271 aa19.53■□□□□ 0.72
CCM2-211ENST00000478582 CASC10Q5T4H9 136 aa19.53■□□□□ 0.72
CCM2-211ENST00000478582 CSNK1G2-AS1Q8NCQ2 148 aa19.53■□□□□ 0.72
CCM2-211ENST00000478582 M0R3E3 92 aa19.52■□□□□ 0.72
CCM2-211ENST00000478582 RANP62826 216 aaKnown RBP19.52■□□□□ 0.72
CCM2-211ENST00000478582 KMT2CQ8NEZ4 4911 aaKnown RBP19.52■□□□□ 0.72
CCM2-211ENST00000478582 NBEAL2Q6ZNJ1 2754 aa19.51■□□□□ 0.71
CCM2-211ENST00000478582 GCHFRP30047 84 aa19.51■□□□□ 0.71
CCM2-211ENST00000478582 OR10J6PQ8NGY7 276 aa19.51■□□□□ 0.71
CCM2-211ENST00000478582 SLC35B3Q9H1N7 401 aa19.51■□□□□ 0.71
CCM2-211ENST00000478582 Q9H3A6 140 aa19.51■□□□□ 0.71
CCM2-211ENST00000478582 SLC51BQ86UW2 128 aa19.5■□□□□ 0.71
CCM2-211ENST00000478582 TMEM167BQ9NRX6 74 aa19.5■□□□□ 0.71
CCM2-211ENST00000478582 PRB4P10163 310 aaPredicted RBP19.49■□□□□ 0.71
CCM2-211ENST00000478582 TMED6Q8WW62 240 aa19.49■□□□□ 0.71
CCM2-211ENST00000478582 OTORQ9NRC9 128 aa19.49■□□□□ 0.71
CCM2-211ENST00000478582 XCL2Q9UBD3 114 aa19.49■□□□□ 0.71
CCM2-211ENST00000478582 DNAH7Q8WXX0 4024 aa19.48■□□□□ 0.71
CCM2-211ENST00000478582 NPIPB6E9PJ23 425 aa19.48■□□□□ 0.71
CCM2-211ENST00000478582 AMBPP02760 352 aa19.48■□□□□ 0.71
CCM2-211ENST00000478582 EIF5AL1Q6IS14 154 aaKnown RBP19.48■□□□□ 0.71
CCM2-211ENST00000478582 DPPA3Q6W0C5 159 aa19.48■□□□□ 0.71
CCM2-211ENST00000478582 FXYD7P58549 80 aa19.47■□□□□ 0.71
CCM2-211ENST00000478582 ARL6IP6Q8N6S5 226 aa19.47■□□□□ 0.71
CCM2-211ENST00000478582 RARRES2Q99969 163 aa19.47■□□□□ 0.71
CCM2-211ENST00000478582 BOLA2-SMG1P6H3BVE0 249 aa19.46■□□□□ 0.71
CCM2-211ENST00000478582 FAM74A1Q5RGS3 127 aa19.46■□□□□ 0.71
CCM2-211ENST00000478582 OR11H2Q8NH07 326 aa19.46■□□□□ 0.71
CCM2-211ENST00000478582 RXFP4Q8TDU9 374 aa19.46■□□□□ 0.71
CCM2-211ENST00000478582 MAP1LC3B2A6NCE7 125 aa19.45■□□□□ 0.7
CCM2-211ENST00000478582 PGPA6NDG6 321 aa19.45■□□□□ 0.7
CCM2-211ENST00000478582 ZNF705EA8MWA4 302 aaPredicted RBP19.45■□□□□ 0.7
CCM2-211ENST00000478582 CSN1S1P47710 185 aa19.45■□□□□ 0.7
CCM2-211ENST00000478582 FHITP49789 147 aa19.45■□□□□ 0.7
CCM2-211ENST00000478582 ODF3Q96PU9 254 aa19.45■□□□□ 0.7
CCM2-211ENST00000478582 MAP1LC3BQ9GZQ8 125 aa19.45■□□□□ 0.7
CCM2-211ENST00000478582 PPP1R14DQ9NXH3 145 aa19.45■□□□□ 0.7
CCM2-211ENST00000478582 SPINK13Q1W4C9 94 aa19.44■□□□□ 0.7
CCM2-211ENST00000478582 C9orf47Q6ZRZ4 202 aa19.44■□□□□ 0.7
CCM2-211ENST00000478582 MBD3L1Q8WWY6 194 aa19.44■□□□□ 0.7
CCM2-211ENST00000478582 IGF2BP2-AS1Q96M15 143 aa19.44■□□□□ 0.7
CCM2-211ENST00000478582 LINC00477Q96M19 166 aa19.44■□□□□ 0.7
CCM2-211ENST00000478582 CRXO43186 299 aaPredicted RBP19.43■□□□□ 0.7
CCM2-211ENST00000478582 CT45A10P0DMU9 189 aa19.43■□□□□ 0.7
CCM2-211ENST00000478582 RAB5CP51148 216 aa19.43■□□□□ 0.7
CCM2-211ENST00000478582 FAM213BQ8TBF2 198 aa19.43■□□□□ 0.7
CCM2-211ENST00000478582 AGPAT4-IT1Q9H0P7 198 aa19.43■□□□□ 0.7
CCM2-211ENST00000478582 RBAKDNA6NC62 111 aa19.42■□□□□ 0.7
CCM2-211ENST00000478582 M0R2Z0 102 aa19.42■□□□□ 0.7
CCM2-211ENST00000478582 FGF8P55075 233 aaPredicted RBP19.42■□□□□ 0.7
CCM2-211ENST00000478582 ZFAND6Q6FIF0 208 aa19.42■□□□□ 0.7
CCM2-211ENST00000478582 ZNF705AQ6ZN79 300 aaPredicted RBP19.42■□□□□ 0.7
CCM2-211ENST00000478582 TMPRSS5Q9H3S3 457 aa19.42■□□□□ 0.7
CCM2-211ENST00000478582 X6R8D5 127 aa19.42■□□□□ 0.7
CCM2-211ENST00000478582 A0A1W2PRE2 83 aa19.41■□□□□ 0.7
CCM2-211ENST00000478582 DIRC3C9JPN6 131 aa19.41■□□□□ 0.7
CCM2-211ENST00000478582 SLC25A5P05141 298 aaKnown RBP19.41■□□□□ 0.7
CCM2-211ENST00000478582 TSPOP30536 169 aa19.41■□□□□ 0.7
CCM2-211ENST00000478582 CDKN1BP46527 198 aa19.41■□□□□ 0.7
CCM2-211ENST00000478582 NKX2-5P52952 324 aaPredicted RBP19.41■□□□□ 0.7
CCM2-211ENST00000478582 ERCC8Q13216 396 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms