RNA–Protein interactions for RNA: ENST00000477085.1

COL4A6-206, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,784 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-206ENST00000477085 CMTM2Q8TAZ6 248 aa10.95□□□□□ -0.66
COL4A6-206ENST00000477085 RAX2Q96IS3 184 aa10.95□□□□□ -0.66
COL4A6-206ENST00000477085 YPEL4Q96NS1 127 aa10.95□□□□□ -0.66
COL4A6-206ENST00000477085 ASCL2Q99929 193 aa10.95□□□□□ -0.66
COL4A6-206ENST00000477085 LY96Q9Y6Y9 160 aa10.95□□□□□ -0.66
COL4A6-206ENST00000477085 SETD2Q9BYW2 2564 aaPredicted RBP10.94□□□□□ -0.66
COL4A6-206ENST00000477085 A0A1W2PS18 150 aa10.94□□□□□ -0.66
COL4A6-206ENST00000477085 PRAC2D3DTV9 90 aa10.94□□□□□ -0.66
COL4A6-206ENST00000477085 SOCS3O14543 225 aa10.94□□□□□ -0.66
COL4A6-206ENST00000477085 C15orf54Q8N8G6 183 aa10.94□□□□□ -0.66
COL4A6-206ENST00000477085 WFDC12Q8WWY7 111 aa10.94□□□□□ -0.66
COL4A6-206ENST00000477085 AAMDCQ9H7C9 122 aa10.94□□□□□ -0.66
COL4A6-206ENST00000477085 TUBA4BQ9H853 241 aa10.94□□□□□ -0.66
COL4A6-206ENST00000477085 C2orf70A6NJV1 201 aa10.93□□□□□ -0.66
COL4A6-206ENST00000477085 COLCA2A8K830 154 aa10.93□□□□□ -0.66
COL4A6-206ENST00000477085 ADARB2-AS1A8MUL3 147 aa10.93□□□□□ -0.66
COL4A6-206ENST00000477085 CBLN1P23435 193 aa10.93□□□□□ -0.66
COL4A6-206ENST00000477085 LCN12Q6JVE5 192 aa10.93□□□□□ -0.66
COL4A6-206ENST00000477085 BAGE2Q86Y30 109 aa10.93□□□□□ -0.66
COL4A6-206ENST00000477085 DLX4Q92988 240 aaPredicted RBP10.93□□□□□ -0.66
COL4A6-206ENST00000477085 C20orf173Q96LM9 149 aa10.93□□□□□ -0.66
COL4A6-206ENST00000477085 MLST8Q9BVC4 326 aa10.93□□□□□ -0.66
COL4A6-206ENST00000477085 IGKV2-40A0A087WW87 121 aaPredicted RBP10.93□□□□□ -0.66
COL4A6-206ENST00000477085 GCGP01275 180 aa10.93□□□□□ -0.66
COL4A6-206ENST00000477085 LTAP01374 205 aa10.93□□□□□ -0.66
COL4A6-206ENST00000477085 IGKV2D-40P01614 121 aaPredicted RBP10.93□□□□□ -0.66
COL4A6-206ENST00000477085 GRAMD2BQ96HH9 432 aa10.93□□□□□ -0.66
COL4A6-206ENST00000477085 FMC1Q96HJ9 113 aa10.93□□□□□ -0.66
COL4A6-206ENST00000477085 TSSC4Q9Y5U2 329 aaPredicted RBP10.93□□□□□ -0.66
COL4A6-206ENST00000477085 IGKV3-7A0A075B6H7 116 aa10.92□□□□□ -0.66
COL4A6-206ENST00000477085 DPF1Q92782 380 aa10.92□□□□□ -0.66
COL4A6-206ENST00000477085 SFRP2Q96HF1 295 aa10.92□□□□□ -0.66
COL4A6-206ENST00000477085 TMEM242Q9NWH2 141 aa10.92□□□□□ -0.66
COL4A6-206ENST00000477085 MLXQ9UH92 298 aa10.92□□□□□ -0.66
COL4A6-206ENST00000477085 MT-ND4LP03901 98 aa10.91□□□□□ -0.66
COL4A6-206ENST00000477085 FOLR2P14207 255 aa10.91□□□□□ -0.66
COL4A6-206ENST00000477085 UBE2G1P62253 170 aa10.91□□□□□ -0.66
COL4A6-206ENST00000477085 FHL3Q13643 280 aa10.91□□□□□ -0.66
COL4A6-206ENST00000477085 PSG3Q16557 428 aa10.91□□□□□ -0.66
COL4A6-206ENST00000477085 TCF24Q7RTU0 167 aa10.91□□□□□ -0.66
COL4A6-206ENST00000477085 Q86TA4 180 aa10.91□□□□□ -0.66
COL4A6-206ENST00000477085 TMEM75Q8N9X5 138 aa10.91□□□□□ -0.66
COL4A6-206ENST00000477085 VGLL1Q99990 258 aa10.91□□□□□ -0.66
COL4A6-206ENST00000477085 SLC50A1Q9BRV3 221 aa10.91□□□□□ -0.66
COL4A6-206ENST00000477085 RNASE7Q9H1E1 156 aaKnown RBP10.91□□□□□ -0.66
COL4A6-206ENST00000477085 TRBV6-1A0A0K0K1D8 114 aa10.9□□□□□ -0.66
COL4A6-206ENST00000477085 S100A9P06702 114 aaKnown RBP10.9□□□□□ -0.66
COL4A6-206ENST00000477085 MGST1P10620 155 aaKnown RBP10.9□□□□□ -0.66
COL4A6-206ENST00000477085 MEOX2P50222 304 aa10.9□□□□□ -0.66
COL4A6-206ENST00000477085 RPL11P62913 178 aaKnown RBP10.9□□□□□ -0.66
COL4A6-206ENST00000477085 LINC00322Q6ZN03 302 aaPredicted RBP10.9□□□□□ -0.66
COL4A6-206ENST00000477085 PRNTQ86SH4 94 aa10.9□□□□□ -0.66
COL4A6-206ENST00000477085 FAM24BQ8N5W8 94 aa10.9□□□□□ -0.66
COL4A6-206ENST00000477085 ARL6IP6Q8N6S5 226 aa10.9□□□□□ -0.66
COL4A6-206ENST00000477085 CTDSP1Q9GZU7 261 aa10.9□□□□□ -0.66
COL4A6-206ENST00000477085 NRN1Q9NPD7 142 aa10.9□□□□□ -0.66
COL4A6-206ENST00000477085 PSG8Q9UQ74 426 aa10.9□□□□□ -0.66
COL4A6-206ENST00000477085 CCL24O00175 119 aa10.9□□□□□ -0.67
COL4A6-206ENST00000477085 CSN1S1P47710 185 aa10.9□□□□□ -0.67
COL4A6-206ENST00000477085 FLI1Q01543 452 aaPredicted RBP10.9□□□□□ -0.67
COL4A6-206ENST00000477085 GBGT1Q8N5D6 347 aa10.9□□□□□ -0.67
COL4A6-206ENST00000477085 OR9G4Q8NGQ1 327 aa10.9□□□□□ -0.67
COL4A6-206ENST00000477085 DCANP1Q8TF63 244 aa10.9□□□□□ -0.67
COL4A6-206ENST00000477085 C16orf92Q96LL3 132 aa10.9□□□□□ -0.67
COL4A6-206ENST00000477085 URGCP-MRPS24S4R325 110 aa10.9□□□□□ -0.67
COL4A6-206ENST00000477085 C2CD3Q4AC94 2353 aa10.89□□□□□ -0.67
COL4A6-206ENST00000477085 CXorf65A6NEN9 183 aa10.89□□□□□ -0.67
COL4A6-206ENST00000477085 CSN3P07498 182 aa10.89□□□□□ -0.67
COL4A6-206ENST00000477085 ERCC8Q13216 396 aa10.89□□□□□ -0.67
COL4A6-206ENST00000477085 ELOBQ15370 118 aa10.89□□□□□ -0.67
COL4A6-206ENST00000477085 ANAPC16Q96DE5 110 aa10.89□□□□□ -0.67
COL4A6-206ENST00000477085 PFN1P07737 140 aaKnown RBP10.88□□□□□ -0.67
COL4A6-206ENST00000477085 CXCL1P09341 107 aa10.88□□□□□ -0.67
COL4A6-206ENST00000477085 DEFB1P60022 68 aa10.88□□□□□ -0.67
COL4A6-206ENST00000477085 TMEM183AQ8IXX5 376 aa10.88□□□□□ -0.67
COL4A6-206ENST00000477085 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.88□□□□□ -0.67
COL4A6-206ENST00000477085 OR10G8Q8NGN5 311 aa10.88□□□□□ -0.67
COL4A6-206ENST00000477085 PRELID1Q9Y255 219 aa10.88□□□□□ -0.67
COL4A6-206ENST00000477085 V9GYV3 84 aa10.88□□□□□ -0.67
COL4A6-206ENST00000477085 H7BYZ3 331 aa10.88□□□□□ -0.67
COL4A6-206ENST00000477085 ERVFC1-1P60608 527 aa10.88□□□□□ -0.67
COL4A6-206ENST00000477085 Q8TAT8 98 aa10.88□□□□□ -0.67
COL4A6-206ENST00000477085 MRPL53Q96EL3 112 aaKnown RBP10.88□□□□□ -0.67
COL4A6-206ENST00000477085 MS4A6AQ9H2W1 248 aa10.88□□□□□ -0.67
COL4A6-206ENST00000477085 TGIF2-C20orf24A0A0A6YYL0 155 aa10.87□□□□□ -0.67
COL4A6-206ENST00000477085 ZNF705DP0CH99 300 aaPredicted RBP10.87□□□□□ -0.67
COL4A6-206ENST00000477085 ZNF705BP0CI00 300 aaPredicted RBP10.87□□□□□ -0.67
COL4A6-206ENST00000477085 CRIP1P50238 77 aa10.87□□□□□ -0.67
COL4A6-206ENST00000477085 FOXL1Q12952 345 aa10.87□□□□□ -0.67
COL4A6-206ENST00000477085 WFDC3Q8IUB2 231 aa10.87□□□□□ -0.67
COL4A6-206ENST00000477085 SMIM12Q96EX1 92 aa10.87□□□□□ -0.67
COL4A6-206ENST00000477085 C8orf49Q96NF6 230 aa10.87□□□□□ -0.67
COL4A6-206ENST00000477085 TENM1Q9UKZ4 2725 aa10.86□□□□□ -0.67
COL4A6-206ENST00000477085 SERTM2A0A1B0GWG4 89 aa10.86□□□□□ -0.67
COL4A6-206ENST00000477085 K7EQM0 130 aa10.86□□□□□ -0.67
COL4A6-206ENST00000477085 NSUN5P1Q3KNT7 163 aa10.86□□□□□ -0.67
COL4A6-206ENST00000477085 PRR27Q6MZM9 219 aa10.86□□□□□ -0.67
COL4A6-206ENST00000477085 NUDT10Q8NFP7 164 aa10.86□□□□□ -0.67
COL4A6-206ENST00000477085 NUDT11Q96G61 164 aa10.86□□□□□ -0.67
COL4A6-206ENST00000477085 ZC2HC1AQ96GY0 325 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 90.7 ms