RNA–Protein interactions for RNA: ENST00000476464.5

PSMD6-206, Transcript of proteasome 26S subunit, non-ATPase 6, human

TSL 2

Gene PSMD6, Length 2,052 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMD6-206	ENST00000476464	RAB9A	P51151	201 aa		12.84	□□□□□ -0.35
PSMD6-206	ENST00000476464	FAM223A	Q8IWN6	122 aa		12.84	□□□□□ -0.35
PSMD6-206	ENST00000476464	KCNS1	Q96KK3	526 aa		12.84	□□□□□ -0.35
PSMD6-206	ENST00000476464	TRAV20	A0A0B4J274	112 aa		12.84	□□□□□ -0.35
PSMD6-206	ENST00000476464		A6NDX4	124 aa		12.84	□□□□□ -0.35
PSMD6-206	ENST00000476464	ZNF705F	A8MVS1	300 aa	Predicted RBP	12.84	□□□□□ -0.35
PSMD6-206	ENST00000476464	CRIP2	P52943	208 aa	Predicted RBP	12.84	□□□□□ -0.35
PSMD6-206	ENST00000476464	C16orf54	Q6UWD8	224 aa		12.84	□□□□□ -0.35
PSMD6-206	ENST00000476464	METTL26	Q96S19	204 aa		12.84	□□□□□ -0.35
PSMD6-206	ENST00000476464	POLQ	O75417	2590 aa		12.83	□□□□□ -0.36
PSMD6-206	ENST00000476464	EPG5	Q9HCE0	2579 aa		12.83	□□□□□ -0.36
PSMD6-206	ENST00000476464	SLC25A16	P16260	332 aa		12.83	□□□□□ -0.36
PSMD6-206	ENST00000476464	PMCH	P20382	165 aa		12.83	□□□□□ -0.36
PSMD6-206	ENST00000476464	CRIP1	P50238	77 aa		12.83	□□□□□ -0.36
PSMD6-206	ENST00000476464	C18orf32	Q8TCD1	76 aa		12.83	□□□□□ -0.36
PSMD6-206	ENST00000476464	NAGK	Q9UJ70	344 aa		12.83	□□□□□ -0.36
PSMD6-206	ENST00000476464		A0A1W2PS18	150 aa		12.82	□□□□□ -0.36
PSMD6-206	ENST00000476464	APOH	P02749	345 aa	Predicted RBP	12.82	□□□□□ -0.36
PSMD6-206	ENST00000476464		Q8TAT8	98 aa		12.82	□□□□□ -0.36
PSMD6-206	ENST00000476464	ANKRD17	O75179	2603 aa	Known RBP	12.82	□□□□□ -0.36
PSMD6-206	ENST00000476464		A8MWP6	167 aa		12.82	□□□□□ -0.36
PSMD6-206	ENST00000476464	IGHG4	P01861	327 aa		12.82	□□□□□ -0.36
PSMD6-206	ENST00000476464	IGF1	P05019	195 aa		12.82	□□□□□ -0.36
PSMD6-206	ENST00000476464	GPX1	P07203	203 aa		12.82	□□□□□ -0.36
PSMD6-206	ENST00000476464	PAX1	P15863	534 aa		12.82	□□□□□ -0.36
PSMD6-206	ENST00000476464	AMT	P48728	403 aa		12.82	□□□□□ -0.36
PSMD6-206	ENST00000476464	SRSF1	Q07955	248 aa	Known RBP eCLIP	12.82	□□□□□ -0.36	6e-7	■□□□□ 9
PSMD6-206	ENST00000476464	VGLL1	Q99990	258 aa		12.82	□□□□□ -0.36
PSMD6-206	ENST00000476464	ALKBH7	Q9BT30	221 aa	Predicted RBP	12.82	□□□□□ -0.36
PSMD6-206	ENST00000476464	TPPP3	Q9BW30	176 aa		12.82	□□□□□ -0.36
PSMD6-206	ENST00000476464		M0QZK8	103 aa		12.81	□□□□□ -0.36
PSMD6-206	ENST00000476464	GATA3	P23771	443 aa		12.81	□□□□□ -0.36
PSMD6-206	ENST00000476464	BLCAP	P62952	87 aa		12.81	□□□□□ -0.36
PSMD6-206	ENST00000476464	LCN12	Q6JVE5	192 aa		12.81	□□□□□ -0.36
PSMD6-206	ENST00000476464	RNF182	Q8N6D2	247 aa		12.81	□□□□□ -0.36
PSMD6-206	ENST00000476464	USP9Y	O00507	2555 aa	Predicted RBP	12.81	□□□□□ -0.36
PSMD6-206	ENST00000476464		A0A087X0K7	114 aa		12.81	□□□□□ -0.36
PSMD6-206	ENST00000476464	IGHG2	P01859	326 aa		12.81	□□□□□ -0.36
PSMD6-206	ENST00000476464	ARL3	P36405	182 aa		12.81	□□□□□ -0.36
PSMD6-206	ENST00000476464	SAPCD1	Q5SSQ6	148 aa		12.81	□□□□□ -0.36
PSMD6-206	ENST00000476464	FAM162B	Q5T6X4	162 aa		12.81	□□□□□ -0.36
PSMD6-206	ENST00000476464	ZNF664	Q8N3J9	261 aa		12.81	□□□□□ -0.36
PSMD6-206	ENST00000476464	ARL6IP6	Q8N6S5	226 aa		12.81	□□□□□ -0.36
PSMD6-206	ENST00000476464	LINC01356	Q8N9X3	169 aa		12.81	□□□□□ -0.36
PSMD6-206	ENST00000476464	SH2D1A	O60880	128 aa		12.8	□□□□□ -0.36
PSMD6-206	ENST00000476464	ZNF705D	P0CH99	300 aa	Predicted RBP	12.8	□□□□□ -0.36
PSMD6-206	ENST00000476464	ZNF705B	P0CI00	300 aa	Predicted RBP	12.8	□□□□□ -0.36
PSMD6-206	ENST00000476464	CTAG1A	P78358	180 aa		12.8	□□□□□ -0.36
PSMD6-206	ENST00000476464	C1orf194	Q5T5A4	169 aa		12.8	□□□□□ -0.36
PSMD6-206	ENST00000476464	UNQ5830/PRO19650/PRO19816	Q6UY13	95 aa		12.8	□□□□□ -0.36
PSMD6-206	ENST00000476464	MAPK1IP1L	Q8NDC0	245 aa		12.8	□□□□□ -0.36
PSMD6-206	ENST00000476464	PRR25	Q96S07	402 aa		12.8	□□□□□ -0.36
PSMD6-206	ENST00000476464	PRPF8	Q6P2Q9	2335 aa	Known RBP eCLIP	12.79	□□□□□ -0.36	3e-20	■■■■■ 39.8
PSMD6-206	ENST00000476464	TMSB15B	A0A087X1C1	80 aa		12.79	□□□□□ -0.36
PSMD6-206	ENST00000476464	HAX1	O00165	279 aa		12.79	□□□□□ -0.36
PSMD6-206	ENST00000476464	ZNF324	O75467	553 aa	Predicted RBP	12.79	□□□□□ -0.36
PSMD6-206	ENST00000476464	DDT	P30046	118 aa		12.79	□□□□□ -0.36
PSMD6-206	ENST00000476464		A0A1B0GUT8	65 aa		12.79	□□□□□ -0.36
PSMD6-206	ENST00000476464	FBLL1	A6NHQ2	334 aa	Known RBP	12.79	□□□□□ -0.36
PSMD6-206	ENST00000476464	TRBV12-3	P01733	135 aa		12.79	□□□□□ -0.36
PSMD6-206	ENST00000476464	NTF3	P20783	257 aa		12.79	□□□□□ -0.36
PSMD6-206	ENST00000476464	FOXA3	P55318	350 aa	Predicted RBP	12.79	□□□□□ -0.36
PSMD6-206	ENST00000476464	KLF5	Q13887	457 aa	Predicted RBP	12.79	□□□□□ -0.36
PSMD6-206	ENST00000476464		Q6ZS46	218 aa		12.79	□□□□□ -0.36
PSMD6-206	ENST00000476464	FAM19A2	Q8N3H0	131 aa		12.79	□□□□□ -0.36
PSMD6-206	ENST00000476464	IGHV3-11	P01762	117 aa		12.78	□□□□□ -0.36
PSMD6-206	ENST00000476464	ARMS2	P0C7Q2	107 aa		12.78	□□□□□ -0.36
PSMD6-206	ENST00000476464	PF4V1	P10720	104 aa		12.78	□□□□□ -0.36
PSMD6-206	ENST00000476464	KRTDAP	P60985	99 aa		12.78	□□□□□ -0.36
PSMD6-206	ENST00000476464	DEFA6	Q01524	100 aa		12.78	□□□□□ -0.36
PSMD6-206	ENST00000476464	RNASEK	Q6P5S7	137 aa	Known RBP	12.78	□□□□□ -0.36
PSMD6-206	ENST00000476464	ATP6V0B	Q99437	205 aa		12.78	□□□□□ -0.36
PSMD6-206	ENST00000476464	SLC50A1	Q9BRV3	221 aa		12.78	□□□□□ -0.36
PSMD6-206	ENST00000476464	NRN1	Q9NPD7	142 aa		12.78	□□□□□ -0.36
PSMD6-206	ENST00000476464	TMEM189	A5PLL7	270 aa		12.77	□□□□□ -0.36
PSMD6-206	ENST00000476464	PRAC2	D3DTV9	90 aa		12.77	□□□□□ -0.36
PSMD6-206	ENST00000476464	PPIF	P30405	207 aa	Known RBP	12.77	□□□□□ -0.36
PSMD6-206	ENST00000476464	ERCC8	Q13216	396 aa		12.77	□□□□□ -0.36
PSMD6-206	ENST00000476464	KLK15	Q9H2R5	256 aa		12.77	□□□□□ -0.36
PSMD6-206	ENST00000476464	TGFA	P01135	160 aa		12.77	□□□□□ -0.37
PSMD6-206	ENST00000476464	RIG	Q13278	110 aa		12.77	□□□□□ -0.37
PSMD6-206	ENST00000476464	BORCS7	Q96B45	105 aa		12.77	□□□□□ -0.37
PSMD6-206	ENST00000476464	NDFIP1	Q9BT67	221 aa		12.77	□□□□□ -0.37
PSMD6-206	ENST00000476464	RNF114	Q9Y508	228 aa		12.77	□□□□□ -0.37
PSMD6-206	ENST00000476464	ZAN	Q9Y493	2812 aa		12.77	□□□□□ -0.37
PSMD6-206	ENST00000476464	CSPG4	Q6UVK1	2322 aa		12.76	□□□□□ -0.37
PSMD6-206	ENST00000476464	LOC102724200	A0A096LPH7	203 aa	Predicted RBP	12.76	□□□□□ -0.37
PSMD6-206	ENST00000476464		Q6AWC8	147 aa		12.76	□□□□□ -0.37
PSMD6-206	ENST00000476464	USMG5	Q96IX5	58 aa		12.76	□□□□□ -0.37
PSMD6-206	ENST00000476464		A0A096LNT2	108 aa		12.76	□□□□□ -0.37
PSMD6-206	ENST00000476464		H3BUA1	57 aa		12.76	□□□□□ -0.37
PSMD6-206	ENST00000476464	HSBP1	O75506	76 aa		12.76	□□□□□ -0.37
PSMD6-206	ENST00000476464	SST	P61278	116 aa		12.76	□□□□□ -0.37
PSMD6-206	ENST00000476464	DEFB112	Q30KQ8	113 aa		12.76	□□□□□ -0.37
PSMD6-206	ENST00000476464	LCNL1	Q6ZST4	164 aa		12.76	□□□□□ -0.37
PSMD6-206	ENST00000476464	C8orf86	Q6ZUL3	223 aa		12.76	□□□□□ -0.37
PSMD6-206	ENST00000476464		U3KQE9	123 aa		12.76	□□□□□ -0.37
PSMD6-206	ENST00000476464	PTPN13	Q12923	2485 aa		12.75	□□□□□ -0.37
PSMD6-206	ENST00000476464	RBM14-RBM4	A0A0A0MSL8	147 aa	Known RBP	12.75	□□□□□ -0.37
PSMD6-206	ENST00000476464	RNF223	E7ERA6	249 aa		12.75	□□□□□ -0.37

Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms