RNA–Protein interactions for RNA: ENST00000476391.5

HDAC1-206, Transcript of histone deacetylase 1, humanhuman

TSL 1 (best)

Gene HDAC1, Length 2,409 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-206ENST00000476391 MYO15AQ9UKN7 3530 aa10.91□□□□□ -0.66
HDAC1-206ENST00000476391 E7EUB6 86 aa10.9□□□□□ -0.66
HDAC1-206ENST00000476391 M0QXV9 152 aa10.9□□□□□ -0.66
HDAC1-206ENST00000476391 LINC01565O15544 149 aa10.9□□□□□ -0.66
HDAC1-206ENST00000476391 AJUBAQ96IF1 538 aa10.9□□□□□ -0.66
HDAC1-206ENST00000476391 PRTN3P24158 256 aa10.9□□□□□ -0.66
HDAC1-206ENST00000476391 PI4KAP42356 2102 aa10.9□□□□□ -0.66
HDAC1-206ENST00000476391 ZFP2Q6ZN57 461 aa10.9□□□□□ -0.66
HDAC1-206ENST00000476391 PPP1R27Q86WC6 154 aa10.9□□□□□ -0.66
HDAC1-206ENST00000476391 REV3LO60673 3130 aa10.9□□□□□ -0.66
HDAC1-206ENST00000476391 DSCAML1Q8TD84 2053 aa10.9□□□□□ -0.67
HDAC1-206ENST00000476391 SRRM5B3KS81 715 aa10.89□□□□□ -0.67
HDAC1-206ENST00000476391 ANKRD29Q8N6D5 301 aa10.89□□□□□ -0.67
HDAC1-206ENST00000476391 VPREB3Q9UKI3 123 aa10.89□□□□□ -0.67
HDAC1-206ENST00000476391 HIGD1AQ9Y241 93 aa10.89□□□□□ -0.67
HDAC1-206ENST00000476391 TNFRSF1AP19438 455 aa10.89□□□□□ -0.67
HDAC1-206ENST00000476391 MZT1Q08AG7 82 aa10.89□□□□□ -0.67
HDAC1-206ENST00000476391 LAMA1P25391 3075 aa10.89□□□□□ -0.67
HDAC1-206ENST00000476391 TRAV4A0A0B4J268 109 aa10.88□□□□□ -0.67
HDAC1-206ENST00000476391 CGB1A6NKQ9 187 aa10.88□□□□□ -0.67
HDAC1-206ENST00000476391 LYPD1Q8N2G4 141 aa10.88□□□□□ -0.67
HDAC1-206ENST00000476391 ZNRF1Q8ND25 227 aa10.88□□□□□ -0.67
HDAC1-206ENST00000476391 TMEM167AQ8TBQ9 72 aa10.88□□□□□ -0.67
HDAC1-206ENST00000476391 RASL11BQ9BPW5 248 aa10.88□□□□□ -0.67
HDAC1-206ENST00000476391 TMEM126AQ9H061 195 aa10.88□□□□□ -0.67
HDAC1-206ENST00000476391 RAB1BQ9H0U4 201 aa10.88□□□□□ -0.67
HDAC1-206ENST00000476391 C12orf49Q9H741 205 aa10.88□□□□□ -0.67
HDAC1-206ENST00000476391 LINC01548A6NM66 108 aa10.88□□□□□ -0.67
HDAC1-206ENST00000476391 TIMM8AO60220 97 aaPredicted RBP10.88□□□□□ -0.67
HDAC1-206ENST00000476391 MYOZ3Q8TDC0 251 aa10.88□□□□□ -0.67
HDAC1-206ENST00000476391 TCL1BO95988 128 aa10.87□□□□□ -0.67
HDAC1-206ENST00000476391 TMEM30BQ3MIR4 351 aa10.87□□□□□ -0.67
HDAC1-206ENST00000476391 FAM159AQ6UWV7 190 aa10.87□□□□□ -0.67
HDAC1-206ENST00000476391 WDFY3Q8IZQ1 3526 aa10.87□□□□□ -0.67
HDAC1-206ENST00000476391 TNFRSF6BO95407 300 aa10.87□□□□□ -0.67
HDAC1-206ENST00000476391 SCGB1C2P0DMR2 95 aa10.87□□□□□ -0.67
HDAC1-206ENST00000476391 MBNL2Q5VZF2 373 aaKnown RBP10.87□□□□□ -0.67
HDAC1-206ENST00000476391 RNF185Q96GF1 192 aa10.87□□□□□ -0.67
HDAC1-206ENST00000476391 ID1P41134 155 aa10.86□□□□□ -0.67
HDAC1-206ENST00000476391 IL11RAQ14626 422 aa10.86□□□□□ -0.67
HDAC1-206ENST00000476391 PVRIGQ6DKI7 326 aa10.86□□□□□ -0.67
HDAC1-206ENST00000476391 Q8N8P6 123 aa10.86□□□□□ -0.67
HDAC1-206ENST00000476391 OR10J6PQ8NGY7 276 aa10.86□□□□□ -0.67
HDAC1-206ENST00000476391 NAV3Q8IVL0 2385 aa10.86□□□□□ -0.67
HDAC1-206ENST00000476391 TRBV19A0A075B6N1 114 aa10.86□□□□□ -0.67
HDAC1-206ENST00000476391 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.86□□□□□ -0.67
HDAC1-206ENST00000476391 TMSB15BA0A087X1C1 80 aa10.85□□□□□ -0.67
HDAC1-206ENST00000476391 TRAV8-2A0A0B4J237 113 aa10.85□□□□□ -0.67
HDAC1-206ENST00000476391 LGALS1P09382 135 aaKnown RBP10.85□□□□□ -0.67
HDAC1-206ENST00000476391 MEIG1Q5JSS6 88 aa10.85□□□□□ -0.67
HDAC1-206ENST00000476391 OR11H6Q8NGC7 330 aa10.85□□□□□ -0.67
HDAC1-206ENST00000476391 MDFICQ9P1T7 246 aa10.85□□□□□ -0.67
HDAC1-206ENST00000476391 H3BVH4 76 aa10.85□□□□□ -0.67
HDAC1-206ENST00000476391 K7EM74 188 aa10.85□□□□□ -0.67
HDAC1-206ENST00000476391 SH2D1AO60880 128 aa10.85□□□□□ -0.67
HDAC1-206ENST00000476391 FOLR3P41439 243 aa10.85□□□□□ -0.67
HDAC1-206ENST00000476391 MAGEA5P43359 124 aa10.85□□□□□ -0.67
HDAC1-206ENST00000476391 GUSBP11Q6P575 273 aa10.85□□□□□ -0.67
HDAC1-206ENST00000476391 SIGLEC15Q6ZMC9 328 aa10.85□□□□□ -0.67
HDAC1-206ENST00000476391 ZNF833PQ6ZTB9 187 aa10.85□□□□□ -0.67
HDAC1-206ENST00000476391 C8orf49Q96NF6 230 aa10.85□□□□□ -0.67
HDAC1-206ENST00000476391 F8VRH5 84 aa10.84□□□□□ -0.67
HDAC1-206ENST00000476391 CRLF1O75462 422 aa10.84□□□□□ -0.67
HDAC1-206ENST00000476391 NDUFA3O95167 84 aa10.84□□□□□ -0.67
HDAC1-206ENST00000476391 CD7P09564 240 aa10.84□□□□□ -0.67
HDAC1-206ENST00000476391 RUSC1-AS1Q66K80 236 aa10.84□□□□□ -0.67
HDAC1-206ENST00000476391 COX8CQ7Z4L0 72 aa10.84□□□□□ -0.67
HDAC1-206ENST00000476391 OR4C13Q8NGP0 309 aa10.84□□□□□ -0.67
HDAC1-206ENST00000476391 ASCL2Q99929 193 aa10.84□□□□□ -0.67
HDAC1-206ENST00000476391 LINC00574Q9H8X3 128 aa10.84□□□□□ -0.67
HDAC1-206ENST00000476391 IGLV2-18A0A075B6J9 118 aa10.84□□□□□ -0.67
HDAC1-206ENST00000476391 TRAV12-1A0A0B4J245 112 aa10.84□□□□□ -0.67
HDAC1-206ENST00000476391 H7C1H1 209 aa10.84□□□□□ -0.67
HDAC1-206ENST00000476391 IGLC6P0CF74 106 aa10.84□□□□□ -0.67
HDAC1-206ENST00000476391 C10orf55Q5SWW7 151 aa10.84□□□□□ -0.67
HDAC1-206ENST00000476391 TMEM78Q5T7P6 136 aa10.84□□□□□ -0.67
HDAC1-206ENST00000476391 SPXQ9BT56 116 aa10.84□□□□□ -0.67
HDAC1-206ENST00000476391 SCNM1Q9BWG6 230 aa10.84□□□□□ -0.67
HDAC1-206ENST00000476391 CNFNQ9BYD5 112 aa10.84□□□□□ -0.67
HDAC1-206ENST00000476391 NGBQ9NPG2 151 aa10.84□□□□□ -0.67
HDAC1-206ENST00000476391 PROCRQ9UNN8 238 aa10.84□□□□□ -0.67
HDAC1-206ENST00000476391 Q0VFX4 171 aa10.83□□□□□ -0.68
HDAC1-206ENST00000476391 PLGLAQ15195 96 aa10.83□□□□□ -0.68
HDAC1-206ENST00000476391 SPRNQ5BIV9 151 aa10.83□□□□□ -0.68
HDAC1-206ENST00000476391 SFTA2Q6UW10 78 aa10.83□□□□□ -0.68
HDAC1-206ENST00000476391 RASL10AQ92737 203 aa10.83□□□□□ -0.68
HDAC1-206ENST00000476391 IGHV3OR15-7A0A075B7D8 119 aa10.83□□□□□ -0.68
HDAC1-206ENST00000476391 A0A1W2PPI3 338 aa10.83□□□□□ -0.68
HDAC1-206ENST00000476391 LYZP61626 148 aa10.83□□□□□ -0.68
HDAC1-206ENST00000476391 NDUFA11Q86Y39 141 aa10.83□□□□□ -0.68
HDAC1-206ENST00000476391 SPRY4Q9C004 299 aa10.83□□□□□ -0.68
HDAC1-206ENST00000476391 PPDPFQ9H3Y8 114 aa10.83□□□□□ -0.68
HDAC1-206ENST00000476391 RPUSD1Q9UJJ7 312 aaKnown RBP10.83□□□□□ -0.68
HDAC1-206ENST00000476391 DNAJC13O75165 2243 aa10.82□□□□□ -0.68
HDAC1-206ENST00000476391 SLC25A20O43772 301 aa10.82□□□□□ -0.68
HDAC1-206ENST00000476391 SPINK14Q6IE38 97 aa10.82□□□□□ -0.68
HDAC1-206ENST00000476391 MRPL20Q9BYC9 149 aaKnown RBP10.82□□□□□ -0.68
HDAC1-206ENST00000476391 AAMDCQ9H7C9 122 aa10.82□□□□□ -0.68
HDAC1-206ENST00000476391 SRSF9Q13242 221 aaKnown RBP eCLIP10.82□□□□□ -0.68
HDAC1-206ENST00000476391 LAGE3Q14657 143 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms