RNA–Protein interactions for RNA: ENST00000475346.1

RPSA-205, Transcript of ribosomal protein SA, humanhuman

TSL 1 (best)

Gene RPSA, Length 622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPSA-205ENST00000475346 HIGD2AQ9BW72 106 aa2.94□□□□□ -1.94
RPSA-205ENST00000475346 RSPO3Q9BXY4 272 aaPredicted RBP2.94□□□□□ -1.94
RPSA-205ENST00000475346 LYRM2Q9NU23 88 aaPredicted RBP2.94□□□□□ -1.94
RPSA-205ENST00000475346 TXNL4BQ9NX01 149 aaKnown RBP2.94□□□□□ -1.94
RPSA-205ENST00000475346 NDUFAF1Q9Y375 327 aa2.94□□□□□ -1.94
RPSA-205ENST00000475346 MINOS1-NBL1R4GNA1 71 aa2.94□□□□□ -1.94
RPSA-205ENST00000475346 DCHS2Q6V1P9 2916 aa2.94□□□□□ -1.94
RPSA-205ENST00000475346 MED13Q9UHV7 2174 aa2.94□□□□□ -1.94
RPSA-205ENST00000475346 LRRK2Q5S007 2527 aa2.93□□□□□ -1.94
RPSA-205ENST00000475346 TLN1Q9Y490 2541 aaKnown RBP2.93□□□□□ -1.94
RPSA-205ENST00000475346 HIVEP1P15822 2718 aa2.93□□□□□ -1.94
RPSA-205ENST00000475346 ANK3Q12955 4377 aaKnown RBP2.93□□□□□ -1.94
RPSA-205ENST00000475346 IGHV3-15A0A0B4J1V0 119 aa2.93□□□□□ -1.94
RPSA-205ENST00000475346 H3BPC8 53 aa2.93□□□□□ -1.94
RPSA-205ENST00000475346 H7C1C5 153 aa2.93□□□□□ -1.94
RPSA-205ENST00000475346 OR1I1O60431 355 aa2.93□□□□□ -1.94
RPSA-205ENST00000475346 SMIM24O75264 130 aa2.93□□□□□ -1.94
RPSA-205ENST00000475346 COX4I1P13073 169 aa2.93□□□□□ -1.94
RPSA-205ENST00000475346 SPI1P17947 270 aa2.93□□□□□ -1.94
RPSA-205ENST00000475346 GLRXP35754 106 aa2.93□□□□□ -1.94
RPSA-205ENST00000475346 XCL1P47992 114 aa2.93□□□□□ -1.94
RPSA-205ENST00000475346 DNAJB13P59910 316 aa2.93□□□□□ -1.94
RPSA-205ENST00000475346 LCN6P62502 163 aa2.93□□□□□ -1.94
RPSA-205ENST00000475346 AKR1C1Q04828 323 aa2.93□□□□□ -1.94
RPSA-205ENST00000475346 RPL18Q07020 188 aaKnown RBP2.93□□□□□ -1.94
RPSA-205ENST00000475346 DEFB134Q4QY38 66 aa2.93□□□□□ -1.94
RPSA-205ENST00000475346 KRTAP5-1Q6L8H4 278 aa2.93□□□□□ -1.94
RPSA-205ENST00000475346 ZNF705AQ6ZN79 300 aaPredicted RBP2.93□□□□□ -1.94
RPSA-205ENST00000475346 ST6GALNAC3Q8NDV1 305 aa2.93□□□□□ -1.94
RPSA-205ENST00000475346 NAT14Q8WUY8 206 aa2.93□□□□□ -1.94
RPSA-205ENST00000475346 COX14Q96I36 57 aa2.93□□□□□ -1.94
RPSA-205ENST00000475346 POPDC3Q9HBV1 291 aa2.93□□□□□ -1.94
RPSA-205ENST00000475346 C8orf4Q9NR00 106 aa2.93□□□□□ -1.94
RPSA-205ENST00000475346 C19orf12Q9NSK7 152 aa2.93□□□□□ -1.94
RPSA-205ENST00000475346 MRPL16Q9NX20 251 aaKnown RBP2.93□□□□□ -1.94
RPSA-205ENST00000475346 RPL26L1Q9UNX3 145 aaKnown RBP2.93□□□□□ -1.94
RPSA-205ENST00000475346 DSCAMO60469 2012 aa2.93□□□□□ -1.94
RPSA-205ENST00000475346 FBN3Q75N90 2809 aa2.92□□□□□ -1.94
RPSA-205ENST00000475346 ABCA12Q86UK0 2595 aa2.92□□□□□ -1.94
RPSA-205ENST00000475346 NOTCH2Q04721 2471 aa2.92□□□□□ -1.94
RPSA-205ENST00000475346 TRAV4A0A0B4J268 109 aa2.92□□□□□ -1.94
RPSA-205ENST00000475346 IFNA10P01566 189 aa2.92□□□□□ -1.94
RPSA-205ENST00000475346 LGALS1P09382 135 aaKnown RBP2.92□□□□□ -1.94
RPSA-205ENST00000475346 COX6B1P14854 86 aa2.92□□□□□ -1.94
RPSA-205ENST00000475346 CBR1P16152 277 aa2.92□□□□□ -1.94
RPSA-205ENST00000475346 COL8A2P25067 703 aa2.92□□□□□ -1.94
RPSA-205ENST00000475346 MIAQ16674 131 aa2.92□□□□□ -1.94
RPSA-205ENST00000475346 Q6ZS92 163 aa2.92□□□□□ -1.94
RPSA-205ENST00000475346 DEFB107AQ8IZN7 70 aa2.92□□□□□ -1.94
RPSA-205ENST00000475346 FAM24BQ8N5W8 94 aa2.92□□□□□ -1.94
RPSA-205ENST00000475346 ZNF439Q8NDP4 499 aa2.92□□□□□ -1.94
RPSA-205ENST00000475346 SMR3AQ99954 134 aa2.92□□□□□ -1.94
RPSA-205ENST00000475346 OR8D2Q9GZM6 311 aa2.92□□□□□ -1.94
RPSA-205ENST00000475346 SH3BGRL3Q9H299 93 aa2.92□□□□□ -1.94
RPSA-205ENST00000475346 XAGE1AQ9HD64 81 aa2.92□□□□□ -1.94
RPSA-205ENST00000475346 BATF3Q9NR55 127 aa2.92□□□□□ -1.94
RPSA-205ENST00000475346 ACER3Q9NUN7 267 aa2.92□□□□□ -1.94
RPSA-205ENST00000475346 NAT8Q9UHE5 227 aa2.92□□□□□ -1.94
RPSA-205ENST00000475346 RBM7Q9Y580 266 aaKnown RBP2.92□□□□□ -1.94
RPSA-205ENST00000475346 DOPEY1Q5JWR5 2465 aa2.92□□□□□ -1.94
RPSA-205ENST00000475346 CREBBPQ92793 2442 aa2.91□□□□□ -1.94
RPSA-205ENST00000475346 TACC2O95359 2948 aa2.91□□□□□ -1.94
RPSA-205ENST00000475346 UNC13CQ8NB66 2214 aa2.91□□□□□ -1.94
RPSA-205ENST00000475346 TRAV41A0A0B4J266 112 aa2.91□□□□□ -1.94
RPSA-205ENST00000475346 CXorf51AA0A1B0GTR3 108 aa2.91□□□□□ -1.94
RPSA-205ENST00000475346 C11orf86A6NJI1 115 aa2.91□□□□□ -1.94
RPSA-205ENST00000475346 VGLL3A8MV65 326 aa2.91□□□□□ -1.94
RPSA-205ENST00000475346 TRAPPC2LH3BP13 241 aa2.91□□□□□ -1.94
RPSA-205ENST00000475346 H3BT86 120 aa2.91□□□□□ -1.94
RPSA-205ENST00000475346 PSCAO43653 123 aa2.91□□□□□ -1.94
RPSA-205ENST00000475346 KLF7O75840 302 aaPredicted RBP2.91□□□□□ -1.94
RPSA-205ENST00000475346 LINC00032P0C843 101 aa2.91□□□□□ -1.94
RPSA-205ENST00000475346 PIGPP57054 158 aa2.91□□□□□ -1.94
RPSA-205ENST00000475346 RPL26P61254 145 aaKnown RBP2.91□□□□□ -1.94
RPSA-205ENST00000475346 SCIMPQ6UWF3 145 aa2.91□□□□□ -1.94
RPSA-205ENST00000475346 IGFL3Q6UXB1 125 aa2.91□□□□□ -1.94
RPSA-205ENST00000475346 BPIFA4PQ86YQ2 179 aa2.91□□□□□ -1.94
RPSA-205ENST00000475346 EXOC3-AS1Q8N2X6 119 aa2.91□□□□□ -1.94
RPSA-205ENST00000475346 GRPEL2Q8TAA5 225 aa2.91□□□□□ -1.94
RPSA-205ENST00000475346 DNAJC9Q8WXX5 260 aa2.91□□□□□ -1.94
RPSA-205ENST00000475346 IMMP2LQ96T52 175 aa2.91□□□□□ -1.94
RPSA-205ENST00000475346 PCTPQ9UKL6 214 aa2.91□□□□□ -1.94
RPSA-205ENST00000475346 TIMM22Q9Y584 194 aa2.91□□□□□ -1.94
RPSA-205ENST00000475346 HSPE1-MOB4S4R3N1 261 aa2.91□□□□□ -1.94
RPSA-205ENST00000475346 TRBV19A0A075B6N1 114 aa2.9□□□□□ -1.95
RPSA-205ENST00000475346 MAP1LC3B2A6NCE7 125 aa2.9□□□□□ -1.95
RPSA-205ENST00000475346 TMEM235A6NFC5 223 aa2.9□□□□□ -1.95
RPSA-205ENST00000475346 FABP5P3A8MUU1 101 aa2.9□□□□□ -1.95
RPSA-205ENST00000475346 J3QRK9 145 aa2.9□□□□□ -1.95
RPSA-205ENST00000475346 AIPO00170 330 aa2.9□□□□□ -1.95
RPSA-205ENST00000475346 RTL8CO15255 209 aa2.9□□□□□ -1.95
RPSA-205ENST00000475346 IFNA7P01567 189 aa2.9□□□□□ -1.95
RPSA-205ENST00000475346 RPS3P23396 243 aaKnown RBP eCLIP2.9□□□□□ -1.954e-18■■■■■ 121.3
RPSA-205ENST00000475346 ZNF80P51504 273 aaPredicted RBP2.9□□□□□ -1.95
RPSA-205ENST00000475346 GTF2A1P52655 376 aaPredicted RBP2.9□□□□□ -1.95
RPSA-205ENST00000475346 KRTAP13-2Q52LG2 175 aa2.9□□□□□ -1.95
RPSA-205ENST00000475346 STAG3L4Q8TBR4 150 aa2.9□□□□□ -1.95
RPSA-205ENST00000475346 C2orf50Q96LR7 162 aa2.9□□□□□ -1.95
RPSA-205ENST00000475346 SERPINI1Q99574 410 aa2.9□□□□□ -1.95
RPSA-205ENST00000475346 MAP1LC3BQ9GZQ8 125 aa2.9□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms